RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 EYA1Q99502 592 aa19.72■□□□□ 0.75
SMARCA4-201ENST00000344626 ABCC1P33527 1531 aa19.72■□□□□ 0.75
SMARCA4-201ENST00000344626 XBP1P17861 261 aa19.72■□□□□ 0.75
SMARCA4-201ENST00000344626 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
SMARCA4-201ENST00000344626 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
SMARCA4-201ENST00000344626 CLEC11AQ9Y240 323 aa19.71■□□□□ 0.75
SMARCA4-201ENST00000344626 NIP7Q9Y221 180 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMARCA4-201ENST00000344626 IDH1O75874 414 aaKnown RBP19.71■□□□□ 0.75
SMARCA4-201ENST00000344626 CCDC47Q96A33 483 aaKnown RBP19.71■□□□□ 0.74
SMARCA4-201ENST00000344626 BRMS1Q9HCU9 246 aa19.71■□□□□ 0.74
SMARCA4-201ENST00000344626 MYO5CQ9NQX4 1742 aa19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 WDHD1O75717 1129 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 FOXD4L5Q5VV16 416 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 FOXD4L4Q8WXT5 416 aaPredicted RBP19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 DNAAF4Q8WXU2 420 aa19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 AKAP2Q9Y2D5 859 aa19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 ARHGEF12Q9NZN5 1544 aa19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 TRAPPC3LQ5T215 181 aa19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 DCAF5Q96JK2 942 aa19.7■□□□□ 0.74
SMARCA4-201ENST00000344626 AACSQ86V21 672 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 CERKQ8TCT0 537 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 IL1RAPL2Q9NP60 686 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 NLRP3Q96P20 1036 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 SMC3Q9UQE7 1217 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 PCDH11XQ9BZA7 1347 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 PCDH11YQ9BZA8 1340 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 ANKRD18BA2A2Z9 1011 aa19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 CDC5LQ99459 802 aaKnown RBP19.69■□□□□ 0.74
SMARCA4-201ENST00000344626 DDX11L8A8MPP1 907 aa19.68■□□□□ 0.74
SMARCA4-201ENST00000344626 MLH3Q9UHC1 1453 aa19.68■□□□□ 0.74
SMARCA4-201ENST00000344626 ARHGEF5Q12774 1597 aa19.68■□□□□ 0.74
SMARCA4-201ENST00000344626 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
SMARCA4-201ENST00000344626 UBE3BQ7Z3V4 1068 aa19.68■□□□□ 0.74
SMARCA4-201ENST00000344626 ANKRD13DQ6ZTN6 518 aa19.67■□□□□ 0.74
SMARCA4-201ENST00000344626 CCDC43Q96MW1 224 aaKnown RBP19.67■□□□□ 0.74
SMARCA4-201ENST00000344626 PDZRN3Q9UPQ7 1066 aa19.67■□□□□ 0.74
SMARCA4-201ENST00000344626 DZIP3Q86Y13 1208 aaKnown RBP19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 FAM182BQ5T319 152 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 TPTE2Q6XPS3 522 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 LDHAL6AQ6ZMR3 332 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 TPD52L1Q16890 204 aaPredicted RBP19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 CREBRFQ8IUR6 639 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 C16orf71Q8IYS4 520 aaPredicted RBP19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 C22orf23Q9BZE7 217 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 CWC25Q9NXE8 425 aaPredicted RBP19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 PI4KAP2A4QPH2 592 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 COPS6Q7L5N1 327 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 PI4KAP1Q8N8J0 262 aa19.66■□□□□ 0.74
SMARCA4-201ENST00000344626 MSNP26038 577 aaKnown RBP19.65■□□□□ 0.74
SMARCA4-201ENST00000344626 MAP3K2Q9Y2U5 619 aa19.65■□□□□ 0.74
SMARCA4-201ENST00000344626 MTHFSDQ2M296 383 aaKnown RBP19.65■□□□□ 0.74
SMARCA4-201ENST00000344626 ZCCHC11Q5TAX3 1644 aaKnown RBP19.65■□□□□ 0.74
SMARCA4-201ENST00000344626 FLIIQ13045 1269 aa19.65■□□□□ 0.74
SMARCA4-201ENST00000344626 HOOK1Q9UJC3 728 aaKnown RBP19.65■□□□□ 0.74
SMARCA4-201ENST00000344626 IL16Q14005 1332 aa19.64■□□□□ 0.74
SMARCA4-201ENST00000344626 XAGE3Q8WTP9 111 aa19.64■□□□□ 0.74
SMARCA4-201ENST00000344626 PTPRCP08575 1304 aa19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 KDM4AO75164 1064 aa19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 GZF1Q9H116 711 aaPredicted RBP19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 RAB11FIP3O75154 756 aa19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 PZPP20742 1482 aa19.64■□□□□ 0.73
SMARCA4-201ENST00000344626 TPM2P07951 284 aa19.63■□□□□ 0.73
SMARCA4-201ENST00000344626 FOXD4L6Q3SYB3 417 aaPredicted RBP19.63■□□□□ 0.73
SMARCA4-201ENST00000344626 FOXD4L3Q6VB84 417 aaPredicted RBP19.63■□□□□ 0.73
SMARCA4-201ENST00000344626 DZIP1Q86YF9 867 aaKnown RBP19.63■□□□□ 0.73
SMARCA4-201ENST00000344626 CRACR2BQ8N4Y2 399 aaPredicted RBP19.62■□□□□ 0.73
SMARCA4-201ENST00000344626 JDP2Q8WYK2 163 aa19.62■□□□□ 0.73
SMARCA4-201ENST00000344626 METP08581 1390 aa19.62■□□□□ 0.73
SMARCA4-201ENST00000344626 EXOC6BQ9Y2D4 811 aa19.62■□□□□ 0.73
SMARCA4-201ENST00000344626 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
SMARCA4-201ENST00000344626 TMEM57Q8N5G2 664 aa19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 SSH1Q8WYL5 1049 aa19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 KIF1BPQ96EK5 621 aa19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 MAP4K4O95819 1239 aaPredicted RBP19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 PLEKHG1Q9ULL1 1385 aa19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 TDO2P48775 406 aa19.61■□□□□ 0.73
SMARCA4-201ENST00000344626 MBD5Q9P267 1494 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 SKOR2Q2VWA4 1001 aaPredicted RBP19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 GPR162Q16538 588 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 TRIM37O94972 964 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 FOSBP53539 338 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 TESK2Q96S53 571 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 EFCAB6Q5THR3 1501 aa19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 VPS37CA5D8V6 355 aaPredicted RBP19.6■□□□□ 0.73
SMARCA4-201ENST00000344626 PLEKHG3A1L390 1219 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 WDR78Q5VTH9 848 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 MCM2P49736 904 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 RARSP54136 660 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 CHD1LQ86WJ1 897 aa19.59■□□□□ 0.73
SMARCA4-201ENST00000344626 SLC5A1P13866 664 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms