RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 CCDC50Q8IVM0 306 aa15.84■□□□□ 0.13
TRIO-202ENST00000344204 FAM200AQ8TCP9 573 aa15.84■□□□□ 0.13
TRIO-202ENST00000344204 PRM3Q9NNZ6 103 aa15.84■□□□□ 0.13
TRIO-202ENST00000344204 CERS3Q8IU89 383 aa15.84■□□□□ 0.13
TRIO-202ENST00000344204 DIAPH1O60610 1272 aaKnown RBP15.84■□□□□ 0.13
TRIO-202ENST00000344204 IFFO1Q0D2I5 559 aa15.84■□□□□ 0.13
TRIO-202ENST00000344204 VPS53Q5VIR6 699 aa15.84■□□□□ 0.13
TRIO-202ENST00000344204 GNG11P61952 73 aa15.83■□□□□ 0.13
TRIO-202ENST00000344204 FSD1Q9BTV5 496 aa15.83■□□□□ 0.13
TRIO-202ENST00000344204 ZNF500O60304 480 aaPredicted RBP15.83■□□□□ 0.12
TRIO-202ENST00000344204 SMC1AQ14683 1233 aaKnown RBP15.83■□□□□ 0.12
TRIO-202ENST00000344204 SMC5Q8IY18 1101 aa15.83■□□□□ 0.12
TRIO-202ENST00000344204 EFCC1Q9HA90 598 aa15.83■□□□□ 0.12
TRIO-202ENST00000344204 MX1P20591 662 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 VIRMAQ69YN4 1812 aaKnown RBP15.82■□□□□ 0.12
TRIO-202ENST00000344204 UBTFL1P0CB47 393 aaPredicted RBP15.82■□□□□ 0.12
TRIO-202ENST00000344204 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 FKBP5Q13451 457 aaPredicted RBP15.82■□□□□ 0.12
TRIO-202ENST00000344204 ERBINQ96RT1 1412 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 HSF2BPO75031 334 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 TBC1D9Q6ZT07 1266 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
TRIO-202ENST00000344204 CCDC12Q8WUD4 166 aaPredicted RBP15.81■□□□□ 0.12
TRIO-202ENST00000344204 RPAINQ86UA6 219 aa15.81■□□□□ 0.12
TRIO-202ENST00000344204 GPRASP1Q5JY77 1395 aa15.81■□□□□ 0.12
TRIO-202ENST00000344204 TAF4BQ92750 862 aa15.81■□□□□ 0.12
TRIO-202ENST00000344204 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
TRIO-202ENST00000344204 BMP2KLQ5H9B9 411 aa15.81■□□□□ 0.12
TRIO-202ENST00000344204 DNAJC21Q5F1R6 531 aaKnown RBP15.81■□□□□ 0.12
TRIO-202ENST00000344204 XBP1P17861 261 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 JAKMIP1Q96N16 626 aaKnown RBP15.8■□□□□ 0.12
TRIO-202ENST00000344204 STK3Q13188 491 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 CCDC114Q96M63 670 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 EIF5P55010 431 aaKnown RBP15.8■□□□□ 0.12
TRIO-202ENST00000344204 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 OPA1O60313 960 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 GNAI3P08754 354 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 GNAI2P04899 355 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 ZSCAN26Q16670 478 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 FAM76AQ8TAV0 307 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 DNAI1Q9UI46 699 aa15.8■□□□□ 0.12
TRIO-202ENST00000344204 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
TRIO-202ENST00000344204 SUDS3Q9H7L9 328 aaPredicted RBP15.79■□□□□ 0.12
TRIO-202ENST00000344204 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 CCDC186Q7Z3E2 898 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
TRIO-202ENST00000344204 STX6O43752 255 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
TRIO-202ENST00000344204 ZSWIM4Q9H7M6 989 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 MAATS1Q7Z4T9 603 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 PTGS1P23219 599 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 EHBP1Q8NDI1 1231 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 AP1ARQ63HQ0 302 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 INPP5BP32019 993 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 GIMAP6Q6P9H5 292 aa15.79■□□□□ 0.12
TRIO-202ENST00000344204 CTAGE9A4FU28 777 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
TRIO-202ENST00000344204 CKAP4Q07065 602 aaKnown RBP15.78■□□□□ 0.12
TRIO-202ENST00000344204 RBBP5Q15291 538 aaKnown RBP15.78■□□□□ 0.12
TRIO-202ENST00000344204 SPA17Q15506 151 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 HECW1Q76N89 1606 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 ELF2Q15723 593 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 ZNF445P59923 1031 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 BLOC1S2Q6QNY1 142 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 ANO6Q4KMQ2 910 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 AFAP1L1Q8TED9 768 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 KIF5BP33176 963 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 BCCIPQ9P287 314 aaKnown RBP eCLIP15.78■□□□□ 0.127e-7■■■□□ 15.9
TRIO-202ENST00000344204 ERICH2A1L162 156 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 TUBBP07437 444 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 EFCAB5A4FU69 1503 aa15.78■□□□□ 0.12
TRIO-202ENST00000344204 NSRP1Q9H0G5 558 aaKnown RBP15.77■□□□□ 0.12
TRIO-202ENST00000344204 MYH6P13533 1939 aa15.77■□□□□ 0.12
TRIO-202ENST00000344204 SEPT6Q14141 434 aa15.77■□□□□ 0.12
TRIO-202ENST00000344204 MIPOL1Q8TD10 442 aa15.77■□□□□ 0.11
TRIO-202ENST00000344204 RBSNQ9H1K0 784 aa15.77■□□□□ 0.11
TRIO-202ENST00000344204 PIP4K2BP78356 416 aa15.77■□□□□ 0.11
TRIO-202ENST00000344204 KIF3BO15066 747 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 TEX2Q8IWB9 1127 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 TMEM57Q8N5G2 664 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 LIMCH1Q9UPQ0 1083 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 TYRO3Q06418 890 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 KAT6AQ92794 2004 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 FERMT3Q86UX7 667 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 GCOM1H8Y6P7 765 aaPredicted RBP15.76■□□□□ 0.11
TRIO-202ENST00000344204 ATP2C2O75185 946 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 MYZAPP0CAP1 466 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 ALS2CR12Q96Q35 445 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 LMOD2Q6P5Q4 547 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
TRIO-202ENST00000344204 CEP83Q9Y592 693 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 FSD2A1L4K1 749 aa15.76■□□□□ 0.11
TRIO-202ENST00000344204 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
TRIO-202ENST00000344204 ATRIPQ8WXE1 791 aa15.75■□□□□ 0.11
TRIO-202ENST00000344204 CEP63Q96MT8 703 aa15.75■□□□□ 0.11
TRIO-202ENST00000344204 CCDC113Q9H0I3 377 aa15.75■□□□□ 0.11
TRIO-202ENST00000344204 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms