RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 AAMPQ13685 434 aa28.16■■■□□ 2.1
CACNB1-201ENST00000344140 ZCRB1Q8TBF4 217 aaKnown RBP28.15■■■□□ 2.1
CACNB1-201ENST00000344140 RLBP1P12271 317 aa28.15■■■□□ 2.1
CACNB1-201ENST00000344140 DCAF5Q96JK2 942 aa28.15■■■□□ 2.1
CACNB1-201ENST00000344140 COG6Q9Y2V7 657 aa28.15■■■□□ 2.1
CACNB1-201ENST00000344140 BTBD11A6QL63 1104 aa28.14■■■□□ 2.1
CACNB1-201ENST00000344140 CYP27B1O15528 508 aa28.14■■■□□ 2.1
CACNB1-201ENST00000344140 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
CACNB1-201ENST00000344140 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
CACNB1-201ENST00000344140 ILDR1Q86SU0 546 aaPredicted RBP28.13■■■□□ 2.09
CACNB1-201ENST00000344140 CLUAP1Q96AJ1 413 aa28.13■■■□□ 2.09
CACNB1-201ENST00000344140 NWD2Q9ULI1 1742 aa28.13■■■□□ 2.09
CACNB1-201ENST00000344140 TNNQ9UQP3 1299 aa28.12■■■□□ 2.09
CACNB1-201ENST00000344140 KDM6AO15550 1401 aaPredicted RBP28.12■■■□□ 2.09
CACNB1-201ENST00000344140 SLIT2O94813 1529 aa28.11■■■□□ 2.09
CACNB1-201ENST00000344140 VIRMAQ69YN4 1812 aaKnown RBP28.11■■■□□ 2.09
CACNB1-201ENST00000344140 MVPQ14764 893 aaKnown RBP28.1■■■□□ 2.09
CACNB1-201ENST00000344140 KDM3BQ7LBC6 1761 aa28.1■■■□□ 2.09
CACNB1-201ENST00000344140 TCERG1O14776 1098 aaKnown RBP28.1■■■□□ 2.09
CACNB1-201ENST00000344140 CHMP4AQ9BY43 222 aa28.1■■■□□ 2.09
CACNB1-201ENST00000344140 SCN11AQ9UI33 1791 aa28.1■■■□□ 2.09
CACNB1-201ENST00000344140 HOXB7P09629 217 aa28.09■■■□□ 2.09
CACNB1-201ENST00000344140 EIF4A1P60842 406 aaKnown RBP28.09■■■□□ 2.09
CACNB1-201ENST00000344140 SLC52A2Q9HAB3 445 aa28.09■■■□□ 2.09
CACNB1-201ENST00000344140 NRAPQ86VF7 1730 aa28.08■■■□□ 2.09
CACNB1-201ENST00000344140 CCDC30Q5VVM6 783 aa28.08■■■□□ 2.09
CACNB1-201ENST00000344140 FNBP4Q8N3X1 1017 aaPredicted RBP28.08■■■□□ 2.09
CACNB1-201ENST00000344140 API5Q9BZZ5 524 aaKnown RBP28.08■■■□□ 2.09
CACNB1-201ENST00000344140 SIPA1L3O60292 1781 aaPredicted RBP28.07■■■□□ 2.08
CACNB1-201ENST00000344140 USP35Q9P2H5 1018 aa28.07■■■□□ 2.08
CACNB1-201ENST00000344140 MRC1P22897 1456 aa28.06■■■□□ 2.08
CACNB1-201ENST00000344140 AFF2P51816 1311 aa28.06■■■□□ 2.08
CACNB1-201ENST00000344140 STK31Q9BXU1 1019 aa28.06■■■□□ 2.08
CACNB1-201ENST00000344140 NKX1-1Q15270 411 aaPredicted RBP28.05■■■□□ 2.08
CACNB1-201ENST00000344140 UNC5CLQ8IV45 518 aa28.05■■■□□ 2.08
CACNB1-201ENST00000344140 USP21Q9UK80 565 aa28.05■■■□□ 2.08
CACNB1-201ENST00000344140 DDX19BQ9UMR2 479 aa28.05■■■□□ 2.08
CACNB1-201ENST00000344140 PTPRCP08575 1304 aa28.05■■■□□ 2.08
CACNB1-201ENST00000344140 SLC4A2P04920 1241 aa28.04■■■□□ 2.08
CACNB1-201ENST00000344140 DISP2A7MBM2 1401 aa28.03■■■□□ 2.08
CACNB1-201ENST00000344140 KCNQ3O43525 872 aa28.02■■■□□ 2.08
CACNB1-201ENST00000344140 ITPRIPQ8IWB1 547 aa28.02■■■□□ 2.08
CACNB1-201ENST00000344140 TMEM57Q8N5G2 664 aa28.02■■■□□ 2.08
CACNB1-201ENST00000344140 NFATC2IPQ8NCF5 419 aa28.02■■■□□ 2.08
CACNB1-201ENST00000344140 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
CACNB1-201ENST00000344140 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.02■■■□□ 2.08
CACNB1-201ENST00000344140 ABCC4O15439 1325 aa28.01■■■□□ 2.07
CACNB1-201ENST00000344140 THRAP3Q9Y2W1 955 aaKnown RBP28.01■■■□□ 2.07
CACNB1-201ENST00000344140 CABP4P57796 275 aa28■■■□□ 2.07
CACNB1-201ENST00000344140 CDCA7Q9BWT1 371 aaPredicted RBP28■■■□□ 2.07
CACNB1-201ENST00000344140 CCDC9Q9Y3X0 531 aaKnown RBP28■■■□□ 2.07
CACNB1-201ENST00000344140 HEG1Q9ULI3 1381 aa28■■■□□ 2.07
CACNB1-201ENST00000344140 ERVV-2B6SEH9 535 aa28■■■□□ 2.07
CACNB1-201ENST00000344140 HDGFL1Q5TGJ6 251 aa28■■■□□ 2.07
CACNB1-201ENST00000344140 DDX54Q8TDD1 881 aaKnown RBP28■■■□□ 2.07
CACNB1-201ENST00000344140 ZNF790Q6PG37 636 aa27.99■■■□□ 2.07
CACNB1-201ENST00000344140 CHMP4BQ9H444 224 aaKnown RBP27.99■■■□□ 2.07
CACNB1-201ENST00000344140 SPATA31A1Q5TZJ5 1347 aa27.98■■■□□ 2.07
CACNB1-201ENST00000344140 SHANK3Q9BYB0 1731 aa27.98■■■□□ 2.07
CACNB1-201ENST00000344140 GIGYF1O75420 1035 aaPredicted RBP27.95■■■□□ 2.07
CACNB1-201ENST00000344140 VPS72Q15906 364 aa27.95■■■□□ 2.07
CACNB1-201ENST00000344140 CENPQQ7L2Z9 268 aaPredicted RBP27.95■■■□□ 2.07
CACNB1-201ENST00000344140 CACNA1FO60840 1977 aa27.95■■■□□ 2.07
CACNB1-201ENST00000344140 TTC5Q8N0Z6 440 aa27.94■■■□□ 2.06
CACNB1-201ENST00000344140 SPATA31A5Q5VU36 1347 aa27.94■■■□□ 2.06
CACNB1-201ENST00000344140 SPATA31A7Q8IWB4 1347 aa27.94■■■□□ 2.06
CACNB1-201ENST00000344140 KDM2BQ8NHM5 1336 aa27.94■■■□□ 2.06
CACNB1-201ENST00000344140 RGS12O14924 1447 aa27.93■■■□□ 2.06
CACNB1-201ENST00000344140 EXOC5O00471 708 aa27.93■■■□□ 2.06
CACNB1-201ENST00000344140 SLC39A6Q13433 755 aa27.93■■■□□ 2.06
CACNB1-201ENST00000344140 ZNF772Q68DY9 489 aaPredicted RBP27.93■■■□□ 2.06
CACNB1-201ENST00000344140 NECTIN2Q92692 538 aa27.93■■■□□ 2.06
CACNB1-201ENST00000344140 TRPC5Q9UL62 973 aaPredicted RBP27.93■■■□□ 2.06
CACNB1-201ENST00000344140 EIF2S2P20042 333 aaKnown RBP27.92■■■□□ 2.06
CACNB1-201ENST00000344140 FLIIQ13045 1269 aa27.91■■■□□ 2.06
CACNB1-201ENST00000344140 INTS3Q68E01 1043 aaKnown RBP27.91■■■□□ 2.06
CACNB1-201ENST00000344140 G2E3Q7L622 706 aa27.91■■■□□ 2.06
CACNB1-201ENST00000344140 ZBTB40Q9NUA8 1239 aa27.91■■■□□ 2.06
CACNB1-201ENST00000344140 WNK3Q9BYP7 1800 aa27.91■■■□□ 2.06
CACNB1-201ENST00000344140 BARGINQ6ZT62 677 aa27.89■■■□□ 2.06
CACNB1-201ENST00000344140 ATRNO75882 1429 aa27.89■■■□□ 2.06
CACNB1-201ENST00000344140 TNS2Q63HR2 1409 aa27.89■■■□□ 2.06
CACNB1-201ENST00000344140 FMNL2Q96PY5 1086 aa27.89■■■□□ 2.05
CACNB1-201ENST00000344140 QTRT2Q9H974 415 aaKnown RBP27.89■■■□□ 2.05
CACNB1-201ENST00000344140 DBF4Q9UBU7 674 aaPredicted RBP27.88■■■□□ 2.05
CACNB1-201ENST00000344140 PCDHB15Q9Y5E8 787 aa27.88■■■□□ 2.05
CACNB1-201ENST00000344140 ZBTB7BO15156 539 aaPredicted RBP27.87■■■□□ 2.05
CACNB1-201ENST00000344140 ZNF496Q96IT1 587 aaPredicted RBP27.87■■■□□ 2.05
CACNB1-201ENST00000344140 FKBP5Q13451 457 aaPredicted RBP27.87■■■□□ 2.05
CACNB1-201ENST00000344140 CHPF2Q9P2E5 772 aa27.87■■■□□ 2.05
CACNB1-201ENST00000344140 GJD4Q96KN9 370 aaPredicted RBP27.86■■■□□ 2.05
CACNB1-201ENST00000344140 SNRPA1P09661 255 aaKnown RBP27.85■■■□□ 2.05
CACNB1-201ENST00000344140 CCT4P50991 539 aaKnown RBP27.85■■■□□ 2.05
CACNB1-201ENST00000344140 RWDD1Q9H446 243 aaPredicted RBP27.85■■■□□ 2.05
CACNB1-201ENST00000344140 TMOD3Q9NYL9 352 aa27.85■■■□□ 2.05
CACNB1-201ENST00000344140 DDB1Q16531 1140 aa27.84■■■□□ 2.05
CACNB1-201ENST00000344140 IGHDP01880 384 aa27.83■■■□□ 2.04
CACNB1-201ENST00000344140 GLI3P10071 1580 aa27.82■■■□□ 2.04
CACNB1-201ENST00000344140 PRAMEF22A3QJZ6 481 aa27.81■■■□□ 2.04
CACNB1-201ENST00000344140 FAM98CQ17RN3 349 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms