RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 USP19O94966 1318 aa12.91□□□□□ -0.34
CAPRIN1-201ENST00000341394 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
CAPRIN1-201ENST00000341394 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
CAPRIN1-201ENST00000341394 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
CAPRIN1-201ENST00000341394 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
CAPRIN1-201ENST00000341394 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
CAPRIN1-201ENST00000341394 FGD1P98174 961 aa12.9□□□□□ -0.34
CAPRIN1-201ENST00000341394 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.35
CAPRIN1-201ENST00000341394 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.35
CAPRIN1-201ENST00000341394 RILPL2Q969X0 211 aa12.9□□□□□ -0.35
CAPRIN1-201ENST00000341394 PANK2Q9BZ23 570 aa12.89□□□□□ -0.35
CAPRIN1-201ENST00000341394 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
CAPRIN1-201ENST00000341394 NCOA3Q9Y6Q9 1424 aa12.89□□□□□ -0.35
CAPRIN1-201ENST00000341394 COL18A1P39060 1754 aa12.89□□□□□ -0.35
CAPRIN1-201ENST00000341394 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
CAPRIN1-201ENST00000341394 TOM1L2Q6ZVM7 507 aa12.88□□□□□ -0.35
CAPRIN1-201ENST00000341394 ZKSCAN2Q63HK3 967 aa12.88□□□□□ -0.35
CAPRIN1-201ENST00000341394 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
CAPRIN1-201ENST00000341394 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
CAPRIN1-201ENST00000341394 IL16Q14005 1332 aa12.88□□□□□ -0.35
CAPRIN1-201ENST00000341394 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
CAPRIN1-201ENST00000341394 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 GNAT3A8MTJ3 354 aa12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 CRB1P82279 1406 aa12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 TEFQ10587 303 aa12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 GOLGA6L4A6NEF3 574 aa12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 TOM1O60784 492 aa12.87□□□□□ -0.35
CAPRIN1-201ENST00000341394 FAM43AQ8N2R8 423 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 TNS3Q68CZ2 1445 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 IPO8O15397 1037 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 VAMP4O75379 141 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 IGHDP01880 384 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
CAPRIN1-201ENST00000341394 SEC24BO95487 1268 aa12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 TRIM27P14373 513 aa12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
CAPRIN1-201ENST00000341394 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
CAPRIN1-201ENST00000341394 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
CAPRIN1-201ENST00000341394 KIAA0232Q92628 1395 aa12.84□□□□□ -0.35
CAPRIN1-201ENST00000341394 PKNOX2Q96KN3 472 aa12.84□□□□□ -0.35
CAPRIN1-201ENST00000341394 ERBB3P21860 1342 aa12.83□□□□□ -0.35
CAPRIN1-201ENST00000341394 LGR6Q9HBX8 967 aa12.83□□□□□ -0.36
CAPRIN1-201ENST00000341394 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
CAPRIN1-201ENST00000341394 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
CAPRIN1-201ENST00000341394 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
CAPRIN1-201ENST00000341394 CHL1O00533 1208 aa12.82□□□□□ -0.36
CAPRIN1-201ENST00000341394 EP400Q96L91 3159 aa12.82□□□□□ -0.36
CAPRIN1-201ENST00000341394 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
CAPRIN1-201ENST00000341394 FOSBP53539 338 aa12.82□□□□□ -0.36
CAPRIN1-201ENST00000341394 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
CAPRIN1-201ENST00000341394 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
CAPRIN1-201ENST00000341394 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 CT47B1P0C2W7 299 aaPredicted RBP12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 PCDHB15Q9Y5E8 787 aa12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 NHSL1Q5SYE7 1610 aa12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 KIAA2012Q0VF49 1180 aa12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
CAPRIN1-201ENST00000341394 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 PDE3AQ14432 1141 aa12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 ZNF592Q92610 1267 aa12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-201ENST00000341394 ROBO1Q9Y6N7 1651 aa12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 MEGF6O75095 1541 aa12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 KCNQ3O43525 872 aa12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 MAP3K5Q99683 1374 aa12.79□□□□□ -0.36
CAPRIN1-201ENST00000341394 DTNBO60941 627 aa12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 MCM4P33991 863 aa12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 CDK11BP21127 795 aaKnown RBP12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
CAPRIN1-201ENST00000341394 ANO2Q9NQ90 1003 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms