RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 IL13P35225 146 aa14.52□□□□□ -0.09
RTN3-203ENST00000341307 TNNQ9UQP3 1299 aa14.52□□□□□ -0.09
RTN3-203ENST00000341307 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 MMP14P50281 582 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 RARSP54136 660 aaKnown RBP14.51□□□□□ -0.09
RTN3-203ENST00000341307 PANK1Q8TE04 598 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 USP6P35125 1406 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 TULP2O00295 520 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 FCHSD2O94868 740 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 CADPS2Q86UW7 1296 aa14.51□□□□□ -0.09
RTN3-203ENST00000341307 DDX49Q9Y6V7 483 aaKnown RBP14.51□□□□□ -0.09
RTN3-203ENST00000341307 NRKQ7Z2Y5 1582 aa14.5□□□□□ -0.09
RTN3-203ENST00000341307 SLFN14P0C7P3 912 aa14.5□□□□□ -0.09
RTN3-203ENST00000341307 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
RTN3-203ENST00000341307 KIF3AQ9Y496 699 aa14.5□□□□□ -0.09
RTN3-203ENST00000341307 AATKQ6ZMQ8 1374 aa14.5□□□□□ -0.09
RTN3-203ENST00000341307 MFAP1P55081 439 aaKnown RBP14.49□□□□□ -0.09
RTN3-203ENST00000341307 KIAA2012Q0VF49 1180 aa14.49□□□□□ -0.09
RTN3-203ENST00000341307 ZSCAN23Q3MJ62 389 aa14.49□□□□□ -0.09
RTN3-203ENST00000341307 NGDNQ8NEJ9 315 aaKnown RBP14.49□□□□□ -0.09
RTN3-203ENST00000341307 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
RTN3-203ENST00000341307 CLUAP1Q96AJ1 413 aa14.49□□□□□ -0.09
RTN3-203ENST00000341307 ZBTB9Q96C00 473 aa14.49□□□□□ -0.09
RTN3-203ENST00000341307 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
RTN3-203ENST00000341307 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
RTN3-203ENST00000341307 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
RTN3-203ENST00000341307 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
RTN3-203ENST00000341307 GABPB1Q06547 395 aaPredicted RBP14.48□□□□□ -0.09
RTN3-203ENST00000341307 BRINP3Q76B58 766 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 TRIM6-TRIM34B2RNG4 842 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 PRIM1P49642 420 aaKnown RBP14.48□□□□□ -0.09
RTN3-203ENST00000341307 ANKRD7Q92527 254 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 TIGD1Q96MW7 591 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 TRIM34Q9BYJ4 488 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 KCNG1Q9UIX4 513 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 MST1RQ04912 1400 aa14.48□□□□□ -0.09
RTN3-203ENST00000341307 FOXO3O43524 673 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 HSPA1LP34931 641 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 CHMP4CQ96CF2 233 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 SSFA2P28290 1259 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 PSEN1P49768 467 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 NUTM2GQ5VZR2 741 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 CLEC17AQ6ZS10 378 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 SNX21Q969T3 373 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.47□□□□□ -0.096e-7■■■□□ 14.6
RTN3-203ENST00000341307 OVOS2A0A0J9YW53 1432 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 OVOS2Q6IE36 1432 aa14.47□□□□□ -0.09
RTN3-203ENST00000341307 RLBP1P12271 317 aa14.46□□□□□ -0.09
RTN3-203ENST00000341307 HSP90AB2PQ58FF8 381 aa14.46□□□□□ -0.09
RTN3-203ENST00000341307 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.1
RTN3-203ENST00000341307 FEZ1Q99689 392 aa14.46□□□□□ -0.1
RTN3-203ENST00000341307 OGFRQ9NZT2 677 aa14.46□□□□□ -0.1
RTN3-203ENST00000341307 C1orf167Q5SNV9 1468 aa14.46□□□□□ -0.1
RTN3-203ENST00000341307 SSH2Q76I76 1423 aa14.45□□□□□ -0.1
RTN3-203ENST00000341307 CCDC66A2RUB6 948 aa14.45□□□□□ -0.1
RTN3-203ENST00000341307 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
RTN3-203ENST00000341307 CAVIN1Q6NZI2 390 aaKnown RBP14.45□□□□□ -0.1
RTN3-203ENST00000341307 BAG4O95429 457 aaKnown RBP14.44□□□□□ -0.1
RTN3-203ENST00000341307 FAM83GA6ND36 823 aa14.44□□□□□ -0.1
RTN3-203ENST00000341307 NFE2L2Q16236 605 aa14.44□□□□□ -0.1
RTN3-203ENST00000341307 AK9Q5TCS8 1911 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 GOLGA6L22H0YM25 854 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 PDE3AQ14432 1141 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 HDAC5Q9UQL6 1122 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 PEAK1Q9H792 1746 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 SULT6B1Q6IMI4 303 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 PIBF1Q8WXW3 757 aa14.43□□□□□ -0.1
RTN3-203ENST00000341307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
RTN3-203ENST00000341307 DCTN1Q14203 1278 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 ROBO1Q9Y6N7 1651 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 MAP3K19Q56UN5 1328 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 NOLC1Q14978 699 aaKnown RBP eCLIP14.42□□□□□ -0.15e-6■□□□□ 9.2
RTN3-203ENST00000341307 SSH1Q8WYL5 1049 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 YY1AP1Q9H869 796 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
RTN3-203ENST00000341307 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
RTN3-203ENST00000341307 NLRP6P59044 892 aa14.41□□□□□ -0.1
RTN3-203ENST00000341307 PCDHB15Q9Y5E8 787 aa14.41□□□□□ -0.1
RTN3-203ENST00000341307 DCCP43146 1447 aa14.4□□□□□ -0.1
RTN3-203ENST00000341307 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
RTN3-203ENST00000341307 IL16Q14005 1332 aa14.4□□□□□ -0.1
RTN3-203ENST00000341307 TTC21AQ8NDW8 1320 aa14.4□□□□□ -0.1
RTN3-203ENST00000341307 FKBP5Q13451 457 aaPredicted RBP14.4□□□□□ -0.1
RTN3-203ENST00000341307 TERF2Q15554 542 aa14.4□□□□□ -0.1
RTN3-203ENST00000341307 GEMIN8Q9NWZ8 242 aaKnown RBP14.4□□□□□ -0.1
RTN3-203ENST00000341307 BCCIPQ9P287 314 aaKnown RBP eCLIP14.4□□□□□ -0.1
RTN3-203ENST00000341307 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
RTN3-203ENST00000341307 PIK3C2AO00443 1686 aa14.39□□□□□ -0.11
RTN3-203ENST00000341307 FMN2Q9NZ56 1722 aa14.39□□□□□ -0.11
RTN3-203ENST00000341307 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
RTN3-203ENST00000341307 CD2BP2O95400 341 aaKnown RBP14.39□□□□□ -0.11
RTN3-203ENST00000341307 C17orf53Q8N3J3 647 aaPredicted RBP14.39□□□□□ -0.11
RTN3-203ENST00000341307 LMBRD1Q9NUN5 540 aa14.39□□□□□ -0.11
RTN3-203ENST00000341307 ABTB2Q8N961 1025 aa14.38□□□□□ -0.11
RTN3-203ENST00000341307 RBM27Q9P2N5 1060 aaKnown RBP14.38□□□□□ -0.11
RTN3-203ENST00000341307 CTIFO43310 598 aaKnown RBP14.38□□□□□ -0.11
RTN3-203ENST00000341307 TSPYL6Q8N831 410 aa14.38□□□□□ -0.11
RTN3-203ENST00000341307 FEZ2Q9UHY8 353 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms