RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 SSH2Q76I76 1423 aa9.78□□□□□ -0.84
NBR1-201ENST00000341165 PLEKHM2Q8IWE5 1019 aa9.77□□□□□ -0.84
NBR1-201ENST00000341165 SRCIN1Q9C0H9 1055 aa9.77□□□□□ -0.84
NBR1-201ENST00000341165 TULP1O00294 542 aaPredicted RBP9.77□□□□□ -0.85
NBR1-201ENST00000341165 MCM4P33991 863 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 FLIIQ13045 1269 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 MSH6P52701 1360 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 PLCD3Q8N3E9 789 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 CRB1P82279 1406 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 GOLGA6L3A6NEY3 463 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 UBTFL1P0CB47 393 aaPredicted RBP9.77□□□□□ -0.85
NBR1-201ENST00000341165 AMOTQ4VCS5 1084 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 HDGFL1Q5TGJ6 251 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 LRRCC1Q9C099 1032 aa9.77□□□□□ -0.85
NBR1-201ENST00000341165 KRT24Q2M2I5 525 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 HSP90AB4PQ58FF6 505 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 IP6K1Q92551 441 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 MEIS3Q99687 375 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 FOXO3O43524 673 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 SIRT2Q8IXJ6 389 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
NBR1-201ENST00000341165 ERC2O15083 957 aa9.75□□□□□ -0.85
NBR1-201ENST00000341165 FER1L4A9Z1Z3 1794 aa9.75□□□□□ -0.85
NBR1-201ENST00000341165 DHX37Q8IY37 1157 aaKnown RBP9.75□□□□□ -0.85
NBR1-201ENST00000341165 HOXB7P09629 217 aa9.75□□□□□ -0.85
NBR1-201ENST00000341165 NUCB2P80303 420 aa9.75□□□□□ -0.85
NBR1-201ENST00000341165 ISY1Q9ULR0 285 aaKnown RBP9.75□□□□□ -0.85
NBR1-201ENST00000341165 RAB11FIP3O75154 756 aa9.74□□□□□ -0.85
NBR1-201ENST00000341165 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
NBR1-201ENST00000341165 F6X3S4 739 aa9.74□□□□□ -0.85
NBR1-201ENST00000341165 OS9Q13438 667 aaPredicted RBP9.74□□□□□ -0.85
NBR1-201ENST00000341165 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
NBR1-201ENST00000341165 GZF1Q9H116 711 aaPredicted RBP9.74□□□□□ -0.85
NBR1-201ENST00000341165 CWC22Q9HCG8 908 aaKnown RBP9.74□□□□□ -0.85
NBR1-201ENST00000341165 TRAK2O60296 914 aa9.73□□□□□ -0.85
NBR1-201ENST00000341165 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
NBR1-201ENST00000341165 MCM2P49736 904 aa9.73□□□□□ -0.85
NBR1-201ENST00000341165 ZNF530Q6P9A1 599 aaPredicted RBP9.73□□□□□ -0.85
NBR1-201ENST00000341165 ATP8B2P98198 1209 aa9.73□□□□□ -0.85
NBR1-201ENST00000341165 GPATCH3Q96I76 525 aa9.73□□□□□ -0.85
NBR1-201ENST00000341165 AKAP4Q5JQC9 854 aa9.73□□□□□ -0.85
NBR1-201ENST00000341165 NALCNQ8IZF0 1738 aa9.72□□□□□ -0.85
NBR1-201ENST00000341165 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
NBR1-201ENST00000341165 DDX58O95786 925 aaKnown RBP9.72□□□□□ -0.85
NBR1-201ENST00000341165 SDSP20132 328 aa9.72□□□□□ -0.85
NBR1-201ENST00000341165 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
NBR1-201ENST00000341165 NAP1L2Q9ULW6 460 aaPredicted RBP9.72□□□□□ -0.85
NBR1-201ENST00000341165 CEP170BQ9Y4F5 1589 aaPredicted RBP9.72□□□□□ -0.85
NBR1-201ENST00000341165 DLG5Q8TDM6 1919 aa9.72□□□□□ -0.85
NBR1-201ENST00000341165 BTBD11A6QL63 1104 aa9.72□□□□□ -0.85
NBR1-201ENST00000341165 SMARCA5O60264 1052 aaPredicted RBP9.72□□□□□ -0.85
NBR1-201ENST00000341165 MX1P20591 662 aa9.72□□□□□ -0.85
NBR1-201ENST00000341165 G2E3Q7L622 706 aa9.72□□□□□ -0.85
NBR1-201ENST00000341165 ZNF771Q7L3S4 317 aaPredicted RBP9.71□□□□□ -0.85
NBR1-201ENST00000341165 PDE1AP54750 535 aa9.71□□□□□ -0.85
NBR1-201ENST00000341165 ADGRL3Q9HAR2 1447 aa9.71□□□□□ -0.86
NBR1-201ENST00000341165 GSPT1P15170 499 aaKnown RBP9.71□□□□□ -0.86
NBR1-201ENST00000341165 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
NBR1-201ENST00000341165 RILPL2Q969X0 211 aa9.71□□□□□ -0.86
NBR1-201ENST00000341165 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
NBR1-201ENST00000341165 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 IL17REQ8NFR9 667 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 USP26Q9BXU7 913 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 FGD1P98174 961 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 C16orf71Q8IYS4 520 aaPredicted RBP9.7□□□□□ -0.86
NBR1-201ENST00000341165 USHBP1Q8N6Y0 703 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 EXOC6BQ9Y2D4 811 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 AOX1Q06278 1338 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 CALRP27797 417 aaKnown RBP9.7□□□□□ -0.86
NBR1-201ENST00000341165 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 LRRFIP2Q9Y608 721 aaKnown RBP9.7□□□□□ -0.86
NBR1-201ENST00000341165 ATP10DQ9P241 1426 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 DNAAF4Q8WXU2 420 aa9.7□□□□□ -0.86
NBR1-201ENST00000341165 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
NBR1-201ENST00000341165 PEAK1Q9H792 1746 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 SURF6O75683 361 aaKnown RBP9.69□□□□□ -0.86
NBR1-201ENST00000341165 MRE11P49959 708 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 RAB3GAP1Q15042 981 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
NBR1-201ENST00000341165 XRN1Q8IZH2 1706 aaKnown RBP9.69□□□□□ -0.86
NBR1-201ENST00000341165 RGS12O14924 1447 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 KIF1BPQ96EK5 621 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 RIMS1Q86UR5 1692 aaKnown RBP9.69□□□□□ -0.86
NBR1-201ENST00000341165 ATF3P18847 181 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
NBR1-201ENST00000341165 RGPD1P0DJD0 1748 aa9.69□□□□□ -0.86
NBR1-201ENST00000341165 CNTROBQ8N137 903 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 RUFY2Q8WXA3 655 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 PXDNLA1KZ92 1463 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 FMN2Q9NZ56 1722 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
NBR1-201ENST00000341165 GCP02774 474 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 ANO2Q9NQ90 1003 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 NPHP4O75161 1426 aaPredicted RBP9.68□□□□□ -0.86
NBR1-201ENST00000341165 ANAPC15P60006 121 aa9.68□□□□□ -0.86
NBR1-201ENST00000341165 NEXNQ0ZGT2 675 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms