RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 AEBP1Q8IUX7 1158 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 LTBP1Q14766 1721 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 NBPF6Q5VWK0 638 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 EXOC6Q8TAG9 804 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 NBPF4Q96M43 638 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 CRBNQ96SW2 442 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 TRIM27P14373 513 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 IL17REQ8NFR9 667 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 SSH1Q8WYL5 1049 aa6.94□□□□□ -1.3
PRPF4B-201ENST00000337659 AK9Q5TCS8 1911 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 NEFLP07196 543 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 RLBP1P12271 317 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 NGDNQ8NEJ9 315 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 LAMA4Q16363 1823 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 GNAT3A8MTJ3 354 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 POLR3GLQ9BT43 218 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 USP42Q9H9J4 1324 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 RIC1Q4ADV7 1423 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 RBM6P78332 1123 aaKnown RBP6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 ZKSCAN2Q63HK3 967 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 AXIN2Q9Y2T1 843 aa6.93□□□□□ -1.3
PRPF4B-201ENST00000337659 BCAR3O75815 825 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 MTX1Q13505 466 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 TICAM2Q86XR7 235 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 IL27Q8NEV9 243 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 MAST2Q6P0Q8 1798 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 ABTB2Q8N961 1025 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 CHMP4BQ9H444 224 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 UBR3Q6ZT12 1888 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 SULT6B1Q6IMI4 303 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 NLRP6P59044 892 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 EIF4A1P60842 406 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 PMFBP1Q8TBY8 1022 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 DDX19BQ9UMR2 479 aa6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 THRAP3Q9Y2W1 955 aaKnown RBP6.92□□□□□ -1.3
PRPF4B-201ENST00000337659 ANO8Q9HCE9 1232 aaPredicted RBP6.91□□□□□ -1.3
PRPF4B-201ENST00000337659 DLEC1Q9Y238 1755 aa6.91□□□□□ -1.3
PRPF4B-201ENST00000337659 RNMTO43148 476 aaKnown RBP6.91□□□□□ -1.3
PRPF4B-201ENST00000337659 ADCY9O60503 1353 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 C8orf58Q8NAV2 365 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 LRRC59Q96AG4 307 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 DUOX1Q9NRD9 1551 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 AOX1Q06278 1338 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 ATF3P18847 181 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 ESCO1Q5FWF5 840 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 OSBPL3Q9H4L5 887 aa6.9□□□□□ -1.3
PRPF4B-201ENST00000337659 IPO8O15397 1037 aaKnown RBP6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 PHKG2P15735 406 aa6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 TAF7Q15545 349 aaPredicted RBP6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 API5Q9BZZ5 524 aaKnown RBP6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 EPB41L2O43491 1005 aaKnown RBP6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 FBLN1P23142 703 aa6.9□□□□□ -1.31
PRPF4B-201ENST00000337659 ERVV-2B6SEH9 535 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 PDIA6Q15084 440 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 BARGINQ6ZT62 677 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 TSPYL6Q8N831 410 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 C8orf34Q49A92 452 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 VSIG10Q8N0Z9 540 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
PRPF4B-201ENST00000337659 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 PIP4K2BP78356 416 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 NUCB1Q02818 461 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 POLA2Q14181 598 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 TWISTNBQ3B726 338 aaPredicted RBP6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 RXRBP28702 533 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 PCDHB15Q9Y5E8 787 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 MYH7P12883 1935 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 PCDH11XQ9BZA7 1347 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 PCDH11YQ9BZA8 1340 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 PLEKHO1Q53GL0 409 aaPredicted RBP6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 SIRT2Q8IXJ6 389 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 CHD4Q14839 1912 aa6.88□□□□□ -1.31
PRPF4B-201ENST00000337659 IGHDP01880 384 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 TSR2Q969E8 191 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 TIAM2Q8IVF5 1701 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 HSP90AB1P08238 724 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 GCC1Q96CN9 775 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 DCAF5Q96JK2 942 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 SLC52A2Q9HAB3 445 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 NOB1Q9ULX3 412 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 RFX7Q2KHR2 1363 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 SNRKQ9NRH2 765 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 ANKRD44Q8N8A2 993 aa6.87□□□□□ -1.31
PRPF4B-201ENST00000337659 DDX60LQ5H9U9 1706 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 U2SURPO15042 1029 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 HMOX1P09601 288 aa6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 AMPHP49418 695 aa6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 MYT1Q01538 1121 aa6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 AFF2P51816 1311 aa6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 CCT4P50991 539 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 ERICH6Q7L0X2 663 aa6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 DCTPP1Q9H773 170 aa6.86□□□□□ -1.31
PRPF4B-201ENST00000337659 GIGYF1O75420 1035 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms