RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 SSFA2P28290 1259 aa21.89■■□□□ 1.09
MUC1-201ENST00000337604 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
MUC1-201ENST00000337604 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
MUC1-201ENST00000337604 COL5A3P25940 1745 aaPredicted RBP21.88■■□□□ 1.09
MUC1-201ENST00000337604 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
MUC1-201ENST00000337604 CD2APQ9Y5K6 639 aa21.87■■□□□ 1.09
MUC1-201ENST00000337604 KIF7Q2M1P5 1343 aa21.86■■□□□ 1.09
MUC1-201ENST00000337604 GNPATO15228 680 aa21.86■■□□□ 1.09
MUC1-201ENST00000337604 AMER1Q5JTC6 1135 aaPredicted RBP21.86■■□□□ 1.09
MUC1-201ENST00000337604 ZNF530Q6P9A1 599 aaPredicted RBP21.86■■□□□ 1.09
MUC1-201ENST00000337604 DCAF5Q96JK2 942 aa21.86■■□□□ 1.09
MUC1-201ENST00000337604 ERVV-2B6SEH9 535 aa21.85■■□□□ 1.09
MUC1-201ENST00000337604 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
MUC1-201ENST00000337604 KNSTRNQ9Y448 316 aa21.85■■□□□ 1.09
MUC1-201ENST00000337604 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
MUC1-201ENST00000337604 IL13P35225 146 aa21.83■■□□□ 1.09
MUC1-201ENST00000337604 AMOTQ4VCS5 1084 aa21.83■■□□□ 1.09
MUC1-201ENST00000337604 MYH14Q7Z406 1995 aaKnown RBP21.82■■□□□ 1.08
MUC1-201ENST00000337604 GRIN3BO60391 1043 aa21.81■■□□□ 1.08
MUC1-201ENST00000337604 SULT6B1Q6IMI4 303 aa21.81■■□□□ 1.08
MUC1-201ENST00000337604 SCN11AQ9UI33 1791 aa21.81■■□□□ 1.08
MUC1-201ENST00000337604 C4AP0C0L4 1744 aa21.8■■□□□ 1.08
MUC1-201ENST00000337604 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
MUC1-201ENST00000337604 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
MUC1-201ENST00000337604 CICQ96RK0 1608 aaPredicted RBP21.8■■□□□ 1.08
MUC1-201ENST00000337604 TJP1Q07157 1748 aa21.79■■□□□ 1.08
MUC1-201ENST00000337604 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
MUC1-201ENST00000337604 KIF13BQ9NQT8 1826 aa21.78■■□□□ 1.08
MUC1-201ENST00000337604 CABP4P57796 275 aa21.78■■□□□ 1.08
MUC1-201ENST00000337604 PER1O15534 1290 aaPredicted RBP21.77■■□□□ 1.08
MUC1-201ENST00000337604 MTHFSP49914 203 aa21.77■■□□□ 1.08
MUC1-201ENST00000337604 C1orf141Q5JVX7 400 aa21.77■■□□□ 1.08
MUC1-201ENST00000337604 MMP10P09238 476 aa21.76■■□□□ 1.07
MUC1-201ENST00000337604 C1QTNF8P60827 252 aa21.76■■□□□ 1.07
MUC1-201ENST00000337604 RC3H1Q5TC82 1133 aaKnown RBP21.76■■□□□ 1.07
MUC1-201ENST00000337604 WWC3Q9ULE0 1092 aa21.76■■□□□ 1.07
MUC1-201ENST00000337604 RTCBQ9Y3I0 505 aaKnown RBP21.76■■□□□ 1.07
MUC1-201ENST00000337604 PXDNLA1KZ92 1463 aa21.75■■□□□ 1.07
MUC1-201ENST00000337604 MRC1P22897 1456 aa21.75■■□□□ 1.07
MUC1-201ENST00000337604 ADCY9O60503 1353 aa21.74■■□□□ 1.07
MUC1-201ENST00000337604 VIRMAQ69YN4 1812 aaKnown RBP21.74■■□□□ 1.07
MUC1-201ENST00000337604 PTCD1O75127 700 aaKnown RBP21.74■■□□□ 1.07
MUC1-201ENST00000337604 NFATC2IPQ8NCF5 419 aa21.74■■□□□ 1.07
MUC1-201ENST00000337604 ARHGEF1Q92888 912 aaKnown RBP21.74■■□□□ 1.07
MUC1-201ENST00000337604 C10orf71Q711Q0 1435 aa21.73■■□□□ 1.07
MUC1-201ENST00000337604 ATP10DQ9P241 1426 aa21.73■■□□□ 1.07
MUC1-201ENST00000337604 ADAMTS7Q9UKP4 1686 aa21.73■■□□□ 1.07
MUC1-201ENST00000337604 TRAPPC3LQ5T215 181 aa21.73■■□□□ 1.07
MUC1-201ENST00000337604 COL3A1P02461 1466 aaPredicted RBP21.72■■□□□ 1.07
MUC1-201ENST00000337604 RPS6KA4O75676 772 aa21.72■■□□□ 1.07
MUC1-201ENST00000337604 GYS1P13807 737 aa21.72■■□□□ 1.07
MUC1-201ENST00000337604 ADRA2BP18089 450 aa21.72■■□□□ 1.07
MUC1-201ENST00000337604 N4BP2Q86UW6 1770 aaPredicted RBP21.71■■□□□ 1.07
MUC1-201ENST00000337604 GIGYF1O75420 1035 aaPredicted RBP21.71■■□□□ 1.07
MUC1-201ENST00000337604 HMOX1P09601 288 aa21.71■■□□□ 1.07
MUC1-201ENST00000337604 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
MUC1-201ENST00000337604 CRKLP46109 303 aaKnown RBP21.7■■□□□ 1.06
MUC1-201ENST00000337604 AKAP4Q5JQC9 854 aa21.7■■□□□ 1.06
MUC1-201ENST00000337604 NLGN1Q8N2Q7 840 aa21.69■■□□□ 1.06
MUC1-201ENST00000337604 LGR6Q9HBX8 967 aa21.69■■□□□ 1.06
MUC1-201ENST00000337604 SENP3-EIF4A1A0A087X0R7 540 aa21.68■■□□□ 1.06
MUC1-201ENST00000337604 SLC52A2Q9HAB3 445 aa21.68■■□□□ 1.06
MUC1-201ENST00000337604 KCPQ6ZWJ8 1503 aa21.68■■□□□ 1.06
MUC1-201ENST00000337604 BRCA1P38398 1863 aaKnown RBP21.67■■□□□ 1.06
MUC1-201ENST00000337604 NPC1L1Q9UHC9 1359 aa21.67■■□□□ 1.06
MUC1-201ENST00000337604 RFC4P35249 363 aa21.67■■□□□ 1.06
MUC1-201ENST00000337604 RNMTO43148 476 aaKnown RBP21.66■■□□□ 1.06
MUC1-201ENST00000337604 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
MUC1-201ENST00000337604 USP42Q9H9J4 1324 aaKnown RBP21.65■■□□□ 1.06
MUC1-201ENST00000337604 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
MUC1-201ENST00000337604 MTHFSDQ2M296 383 aaKnown RBP21.65■■□□□ 1.06
MUC1-201ENST00000337604 INTS5Q6P9B9 1019 aaKnown RBP21.65■■□□□ 1.06
MUC1-201ENST00000337604 UBR2Q8IWV8 1755 aa21.64■■□□□ 1.06
MUC1-201ENST00000337604 SLC39A6Q13433 755 aa21.63■■□□□ 1.05
MUC1-201ENST00000337604 DNAJC10Q8IXB1 793 aa21.63■■□□□ 1.05
MUC1-201ENST00000337604 A0A0G2JLW4 131 aa21.62■■□□□ 1.05
MUC1-201ENST00000337604 TGFB2P61812 414 aa21.62■■□□□ 1.05
MUC1-201ENST00000337604 FKBP8Q14318 412 aa21.62■■□□□ 1.05
MUC1-201ENST00000337604 DDR1Q08345 913 aa21.61■■□□□ 1.05
MUC1-201ENST00000337604 CCDC87Q9NVE4 849 aa21.61■■□□□ 1.05
MUC1-201ENST00000337604 PARP3Q9Y6F1 533 aa21.61■■□□□ 1.05
MUC1-201ENST00000337604 DPEP1P16444 411 aa21.6■■□□□ 1.05
MUC1-201ENST00000337604 CNGB1Q14028 1251 aaPredicted RBP21.6■■□□□ 1.05
MUC1-201ENST00000337604 SOS1Q07889 1333 aaPredicted RBP21.59■■□□□ 1.05
MUC1-201ENST00000337604 CYP19A1P11511 503 aaPredicted RBP21.59■■□□□ 1.05
MUC1-201ENST00000337604 ZNF526Q8TF50 670 aaPredicted RBP21.59■■□□□ 1.05
MUC1-201ENST00000337604 GPBP1L1Q9HC44 474 aaPredicted RBP21.59■■□□□ 1.05
MUC1-201ENST00000337604 BCS1LQ9Y276 419 aa21.59■■□□□ 1.05
MUC1-201ENST00000337604 KCNA3P22001 575 aa21.58■■□□□ 1.05
MUC1-201ENST00000337604 SIPA1L3O60292 1781 aaPredicted RBP21.58■■□□□ 1.04
MUC1-201ENST00000337604 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
MUC1-201ENST00000337604 ZBTB1Q9Y2K1 713 aa21.57■■□□□ 1.04
MUC1-201ENST00000337604 CEP350Q5VT06 3117 aa21.57■■□□□ 1.04
MUC1-201ENST00000337604 COL15A1P39059 1388 aa21.56■■□□□ 1.04
MUC1-201ENST00000337604 POLRMTO00411 1230 aaKnown RBP21.55■■□□□ 1.04
MUC1-201ENST00000337604 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
MUC1-201ENST00000337604 TM4SF1P30408 202 aa21.54■■□□□ 1.04
MUC1-201ENST00000337604 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
MUC1-201ENST00000337604 AFDNP55196 1824 aaKnown RBP21.54■■□□□ 1.04
MUC1-201ENST00000337604 NRXN2Q9P2S2 1712 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms