RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 TRDNQ13061 729 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 IL13P35225 146 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 DNAAF4Q8WXU2 420 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 PTCH1Q13635 1447 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 TMEM131LA2VDJ0 1609 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 SRGAP3O43295 1099 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 IGHMBP2P38935 993 aaKnown RBP11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 FLIIQ13045 1269 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 TMEM57Q8N5G2 664 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 SYNE3Q6ZMZ3 975 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
FNDC3B-201ENST00000336824 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 TTC39AQ5SRH9 613 aa11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 GBP4Q96PP9 640 aa11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 MYD88Q99836 296 aa11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■■□□ 15.1
FNDC3B-201ENST00000336824 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 ZNF335Q9H4Z2 1342 aaPredicted RBP11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 RAB11FIP3O75154 756 aa11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
FNDC3B-201ENST00000336824 CDC45O75419 566 aa11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 PDE4AP27815 886 aa11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 CPLX2Q6PUV4 134 aaKnown RBP11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 DDX17Q92841 729 aaKnown RBP11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 BCORL1Q5H9F3 1711 aa11.31□□□□□ -0.6
FNDC3B-201ENST00000336824 CSPP1Q1MSJ5 1256 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 PPP1R42Q7Z4L9 355 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 RFC4P35249 363 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 FSD1Q9BTV5 496 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 NFATC2IPQ8NCF5 419 aa11.3□□□□□ -0.6
FNDC3B-201ENST00000336824 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 USP21Q9UK80 565 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 MAP3K2Q9Y2U5 619 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 AKAP17AQ02040 695 aaKnown RBP11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 ERICH2A1L162 156 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 SIL1Q9H173 461 aa11.29□□□□□ -0.6
FNDC3B-201ENST00000336824 TRMT112Q9UI30 125 aaKnown RBP11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 IFIT5Q13325 482 aaKnown RBP11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 CDK12Q9NYV4 1490 aaPredicted RBP11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 C3P01024 1663 aa11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 SPRYD3Q8NCJ5 442 aa11.28□□□□□ -0.6
FNDC3B-201ENST00000336824 TRIM27P14373 513 aa11.27□□□□□ -0.6
FNDC3B-201ENST00000336824 CHD1LQ86WJ1 897 aa11.27□□□□□ -0.6
FNDC3B-201ENST00000336824 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.6
FNDC3B-201ENST00000336824 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 HOXB7P09629 217 aa11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
FNDC3B-201ENST00000336824 BLMP54132 1417 aaPredicted RBP11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 AACSQ86V21 672 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 PSMA5P28066 241 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 PI4KAP1Q8N8J0 262 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 METTL24Q5JXM2 366 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 FAM184AQ8NB25 1140 aa11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 CDC5LQ99459 802 aaKnown RBP11.26□□□□□ -0.61
FNDC3B-201ENST00000336824 ST5P78524 1137 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 ANKRD18BA2A2Z9 1011 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 ZBTB3Q9H5J0 574 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 MROH1Q8NDA8 1641 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 SLC39A6Q13433 755 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 F6X3S4 739 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 ERVV-2B6SEH9 535 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 IPO9Q96P70 1041 aaKnown RBP11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
FNDC3B-201ENST00000336824 ARHGEF25Q86VW2 580 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 NYXQ9GZU5 481 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 RTCBQ9Y3I0 505 aaKnown RBP11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
FNDC3B-201ENST00000336824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.611e-11■■□□□ 11.9
FNDC3B-201ENST00000336824 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms