RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PIK3C2AO00443 1686 aa17.08■□□□□ 0.33
SF1-202ENST00000334944 ATP10DQ9P241 1426 aa17.08■□□□□ 0.33
SF1-202ENST00000334944 PDE4CQ08493 712 aa17.08■□□□□ 0.33
SF1-202ENST00000334944 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.33
SF1-202ENST00000334944 KIF2CQ99661 725 aa17.08■□□□□ 0.33
SF1-202ENST00000334944 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
SF1-202ENST00000334944 KIAA0232Q92628 1395 aa17.08■□□□□ 0.32
SF1-202ENST00000334944 UQCRHLA0A096LP55 91 aa17.07■□□□□ 0.32
SF1-202ENST00000334944 UQCRHP07919 91 aa17.07■□□□□ 0.32
SF1-202ENST00000334944 PSME1Q06323 249 aa17.07■□□□□ 0.32
SF1-202ENST00000334944 ZSCAN30Q86W11 494 aa17.07■□□□□ 0.32
SF1-202ENST00000334944 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
SF1-202ENST00000334944 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
SF1-202ENST00000334944 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
SF1-202ENST00000334944 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
SF1-202ENST00000334944 NALCNQ8IZF0 1738 aa17.07■□□□□ 0.32
SF1-202ENST00000334944 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
SF1-202ENST00000334944 KDRP35968 1356 aa17.06■□□□□ 0.32
SF1-202ENST00000334944 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
SF1-202ENST00000334944 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
SF1-202ENST00000334944 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
SF1-202ENST00000334944 PTPRCP08575 1304 aa17.06■□□□□ 0.32
SF1-202ENST00000334944 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
SF1-202ENST00000334944 FLIIQ13045 1269 aa17.06■□□□□ 0.32
SF1-202ENST00000334944 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
SF1-202ENST00000334944 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
SF1-202ENST00000334944 CDC45O75419 566 aa17.05■□□□□ 0.32
SF1-202ENST00000334944 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
SF1-202ENST00000334944 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
SF1-202ENST00000334944 ANXA1P04083 346 aa17.05■□□□□ 0.32
SF1-202ENST00000334944 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
SF1-202ENST00000334944 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
SF1-202ENST00000334944 RPAP2Q8IXW5 612 aaPredicted RBP17.05■□□□□ 0.32
SF1-202ENST00000334944 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
SF1-202ENST00000334944 SDSP20132 328 aa17.04■□□□□ 0.32
SF1-202ENST00000334944 KCNQ3O43525 872 aa17.03■□□□□ 0.32
SF1-202ENST00000334944 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.03■□□□□ 0.32
SF1-202ENST00000334944 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
SF1-202ENST00000334944 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.32
SF1-202ENST00000334944 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
SF1-202ENST00000334944 TSC1Q92574 1164 aa17.02■□□□□ 0.32
SF1-202ENST00000334944 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.31
SF1-202ENST00000334944 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
SF1-202ENST00000334944 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
SF1-202ENST00000334944 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
SF1-202ENST00000334944 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
SF1-202ENST00000334944 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
SF1-202ENST00000334944 NCLP19338 710 aaKnown RBP17■□□□□ 0.31
SF1-202ENST00000334944 CCDC173Q0VFZ6 552 aa17■□□□□ 0.31
SF1-202ENST00000334944 LRRFIP2Q9Y608 721 aaKnown RBP17■□□□□ 0.31
SF1-202ENST00000334944 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
SF1-202ENST00000334944 ANP32BQ92688 251 aaKnown RBP17■□□□□ 0.31
SF1-202ENST00000334944 GNAI2P04899 355 aa16.99■□□□□ 0.31
SF1-202ENST00000334944 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
SF1-202ENST00000334944 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
SF1-202ENST00000334944 SMAP1Q8IYB5 467 aaPredicted RBP16.98■□□□□ 0.31
SF1-202ENST00000334944 HMMRO75330 724 aa16.98■□□□□ 0.31
SF1-202ENST00000334944 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
SF1-202ENST00000334944 IP6K1Q92551 441 aa16.97■□□□□ 0.31
SF1-202ENST00000334944 ANKARQ7Z5J8 1434 aa16.97■□□□□ 0.31
SF1-202ENST00000334944 MPNDQ8N594 471 aa16.97■□□□□ 0.31
SF1-202ENST00000334944 DDX17Q92841 729 aaKnown RBP16.97■□□□□ 0.31
SF1-202ENST00000334944 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
SF1-202ENST00000334944 FAM177BA6PVY3 158 aa16.96■□□□□ 0.31
SF1-202ENST00000334944 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
SF1-202ENST00000334944 SNX21Q969T3 373 aa16.96■□□□□ 0.31
SF1-202ENST00000334944 CHPF2Q9P2E5 772 aa16.96■□□□□ 0.31
SF1-202ENST00000334944 PDE1AP54750 535 aa16.95■□□□□ 0.3
SF1-202ENST00000334944 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
SF1-202ENST00000334944 SSFA2P28290 1259 aa16.95■□□□□ 0.3
SF1-202ENST00000334944 PPP1R9BQ96SB3 815 aa16.95■□□□□ 0.3
SF1-202ENST00000334944 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
SF1-202ENST00000334944 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
SF1-202ENST00000334944 CBX1P83916 185 aa16.95■□□□□ 0.3
SF1-202ENST00000334944 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
SF1-202ENST00000334944 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
SF1-202ENST00000334944 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
SF1-202ENST00000334944 IGSF3O75054 1194 aa16.94■□□□□ 0.3
SF1-202ENST00000334944 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
SF1-202ENST00000334944 RILPL2Q969X0 211 aa16.94■□□□□ 0.3
SF1-202ENST00000334944 GBP4Q96PP9 640 aa16.94■□□□□ 0.3
SF1-202ENST00000334944 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
SF1-202ENST00000334944 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
SF1-202ENST00000334944 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
SF1-202ENST00000334944 GCP02774 474 aa16.94■□□□□ 0.3
SF1-202ENST00000334944 TRIM6-TRIM34B2RNG4 842 aa16.93■□□□□ 0.3
SF1-202ENST00000334944 TEFQ10587 303 aa16.93■□□□□ 0.3
SF1-202ENST00000334944 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.93■□□□□ 0.3
SF1-202ENST00000334944 AXIN2Q9Y2T1 843 aa16.93■□□□□ 0.3
SF1-202ENST00000334944 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
SF1-202ENST00000334944 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
SF1-202ENST00000334944 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
SF1-202ENST00000334944 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
SF1-202ENST00000334944 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
SF1-202ENST00000334944 PI4KAP2A4QPH2 592 aa16.92■□□□□ 0.3
SF1-202ENST00000334944 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
SF1-202ENST00000334944 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
SF1-202ENST00000334944 DDIT3P35638 169 aa16.92■□□□□ 0.3
SF1-202ENST00000334944 NOL8Q76FK4 1167 aaKnown RBP16.92■□□□□ 0.3
SF1-202ENST00000334944 PI4KAP1Q8N8J0 262 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms