RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PLS1Q14651 629 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 TSNAXIP1Q2TAA8 658 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 CEP112Q8N8E3 955 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 IWS1Q96ST2 819 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 CSB-PGBD3P0DP91 1061 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 SPATS2Q86XZ4 545 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 EPSTI1Q96J88 318 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 GRIN2BQ13224 1484 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 DTNBO60941 627 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 JAKMIP1Q96N16 626 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 LARSQ9P2J5 1176 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 FMN1Q68DA7 1419 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 TUBB4AP04350 444 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 PPP2R5AQ15172 486 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 SF3B3Q15393 1217 aaKnown RBP7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 PLCD3Q8N3E9 789 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 EHBP1Q8NDI1 1231 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 CRACR2AQ9BSW2 395 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 MTUS1Q9ULD2 1270 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 B4GALNT4Q76KP1 1039 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 SPDL1Q96EA4 605 aa7.05□□□□□ -1.28
CDC42BPA-201ENST00000334218 SPECC1L-ADORA2AF8WAN1 911 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 KRT222Q8N1A0 295 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 SASS6Q6UVJ0 657 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 SPATA17Q96L03 361 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■□□□□ 11.1
CDC42BPA-201ENST00000334218 CLIP2Q9UDT6 1046 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 TUBA3CQ13748 450 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 EXOC8Q8IYI6 725 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 MSL3Q8N5Y2 521 aaKnown RBP7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 GAPVD1Q14C86 1478 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 TXLNAP40222 546 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 IRX1P78414 480 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 MAP2K1Q02750 393 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 HSP90AA5PQ58FG0 334 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 TAOK3Q9H2K8 898 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 GJC2Q5T442 439 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 TRIML1Q8N9V2 468 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 HEATR3Q7Z4Q2 680 aa7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
CDC42BPA-201ENST00000334218 MIS18AQ9NYP9 233 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 HMGB2P26583 209 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 MMRN2Q9H8L6 949 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 CEP131Q9UPN4 1083 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 PAWRQ96IZ0 340 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 MGEA5O60502 916 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 IFFO2Q5TF58 517 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 SH3GL3Q99963 347 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 CACNA2D3Q8IZS8 1091 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 CD2APQ9Y5K6 639 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 GABPB1Q06547 395 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 PSMD6Q15008 389 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 NOL10Q9BSC4 688 aaKnown RBP7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 EMC3Q9P0I2 261 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 ABCF2Q9UG63 623 aa7.03□□□□□ -1.28
CDC42BPA-201ENST00000334218 TNIKQ9UKE5 1360 aa7.02□□□□□ -1.28
CDC42BPA-201ENST00000334218 IGBP1P78318 339 aa7.02□□□□□ -1.28
CDC42BPA-201ENST00000334218 ZNF513Q8N8E2 541 aaPredicted RBP7.02□□□□□ -1.28
CDC42BPA-201ENST00000334218 TUBA8Q9NY65 449 aaPredicted RBP7.02□□□□□ -1.28
CDC42BPA-201ENST00000334218 CCNB3Q8WWL7 1395 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 IRX4P78413 519 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 GRM1Q13255 1194 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 MVPQ14764 893 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC122Q5T0U0 273 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 MAGEC2Q9UBF1 373 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 CROCCQ5TZA2 2017 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 RAPGEF2Q9Y4G8 1499 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 TBCAO75347 108 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 ZBTB16Q05516 673 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 SETDB1Q15047 1291 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 NSRP1Q9H0G5 558 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 SEC63Q9UGP8 760 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 ARIH1Q9Y4X5 557 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 ESPNB1AK53 854 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 PFDN1O60925 122 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 CHGBP05060 677 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 SDCCAG8Q86SQ7 713 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC68Q9H2F9 335 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 CHCHD3Q9NX63 227 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 NEBLO76041 1014 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 NOP14P78316 857 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 LMNB2Q03252 620 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 STX17P56962 302 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 FAM69CQ0P6D2 419 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 STIM2Q9P246 746 aa7.02□□□□□ -1.29
CDC42BPA-201ENST00000334218 GMEB1Q9Y692 573 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 BBOF1Q8ND07 529 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 SMC1BQ8NDV3 1235 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 RPGRIP1Q96KN7 1286 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 NAA25Q14CX7 972 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 OLFM4Q6UX06 510 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 GSDMBQ8TAX9 411 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 BHMTQ93088 406 aa7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-201ENST00000334218 RNF187Q5TA31 235 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms