RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ADCY5O95622 1261 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 CKAP4Q07065 602 aaKnown RBP11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 TTC5Q8N0Z6 440 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 ARID4AP29374 1257 aaPredicted RBP11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 CEP57Q86XR8 500 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 ANO10Q9NW15 660 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 FERP16591 822 aa11.97□□□□□ -0.49
SPTBN1-201ENST00000333896 NEK4P51957 841 aa11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 NGDNQ8NEJ9 315 aaKnown RBP11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 APBB1IPQ7Z5R6 666 aaPredicted RBP11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 LMNTD2Q8IXW0 634 aa11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 TAOK3Q9H2K8 898 aa11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 LUC7L2Q9Y383 392 aaKnown RBP11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 WHAMMP3Q1A5X7 153 aa11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 LRSAM1Q6UWE0 723 aa11.96□□□□□ -0.49
SPTBN1-201ENST00000333896 SLU7O95391 586 aaKnown RBP11.96□□□□□ -0.5
SPTBN1-201ENST00000333896 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.5
SPTBN1-201ENST00000333896 HSF2BPO75031 334 aa11.96□□□□□ -0.5
SPTBN1-201ENST00000333896 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.5
SPTBN1-201ENST00000333896 KRBA2Q6ZNG9 492 aa11.96□□□□□ -0.5
SPTBN1-201ENST00000333896 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 COMMD10Q9Y6G5 202 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 WDR78Q5VTH9 848 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 CCDC172P0C7W6 258 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 HDXQ7Z353 690 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 HOOK3Q86VS8 718 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 CTNNBL1Q8WYA6 563 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 VCXQ9H320 206 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 ABCC8Q09428 1581 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 IFT74Q96LB3 600 aa11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 TRIM21P19474 475 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-201ENST00000333896 RLBP1P12271 317 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 CLNS1AP54105 237 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 NOL3O60936 208 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 EVA1CP58658 441 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 CCDC6Q16204 474 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 ZSCAN31Q96LW9 406 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 SPECC1Q5M775 1068 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 CCDC30Q5VVM6 783 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 CETN2P41208 172 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 TTC14Q96N46 770 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 FBF1Q8TES7 1133 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 DDX58O95786 925 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
SPTBN1-201ENST00000333896 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 TEFQ10587 303 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 ATP11AP98196 1134 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 VGLL3A8MV65 326 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 HOMER2Q9NSB8 354 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 TUBB2AQ13885 445 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 STX1AQ16623 288 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 TUBB2BQ9BVA1 445 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 PPFIA3O75145 1194 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 CFAP58Q5T655 872 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 SPA17Q15506 151 aa11.93□□□□□ -0.5
SPTBN1-201ENST00000333896 RUNDC1Q96C34 613 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 ERCC3P19447 782 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 TNPO1Q92973 898 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 TCHHQ07283 1943 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 PAFAH1B1P43034 410 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 TTC36A6NLP5 189 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 ATP2C2O75185 946 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 SLC8A1P32418 973 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 UBE2HP62256 183 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 AIMP1Q12904 312 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 TSNAXIP1Q2TAA8 658 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 ZSCAN23Q3MJ62 389 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 GBP1P32455 592 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 FLIIQ13045 1269 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 DBN1Q16643 649 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 TACC1O75410 805 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 STK3Q13188 491 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 ALS2CR12Q96Q35 445 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
SPTBN1-201ENST00000333896 DNA2P51530 1060 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 MXRA7P84157 204 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 SCLT1Q96NL6 688 aa11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 FEZ2Q9UHY8 353 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 NKTRP30414 1462 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 GOLGA4Q13439 2230 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-201ENST00000333896 KIF4BQ2VIQ3 1234 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms