RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ESYT1Q9BSJ8 1104 aa28.74■■■□□ 2.19
TSKU-201ENST00000333090 G2E3Q7L622 706 aa28.73■■■□□ 2.19
TSKU-201ENST00000333090 MCM5P33992 734 aa28.73■■■□□ 2.19
TSKU-201ENST00000333090 CSPP1Q1MSJ5 1256 aa28.72■■■□□ 2.19
TSKU-201ENST00000333090 ANO2Q9NQ90 1003 aa28.72■■■□□ 2.19
TSKU-201ENST00000333090 MCCP23508 829 aa28.72■■■□□ 2.19
TSKU-201ENST00000333090 CEBPAP49715 358 aaPredicted RBP28.71■■■□□ 2.19
TSKU-201ENST00000333090 PRR36Q9H6K5 1346 aa28.71■■■□□ 2.19
TSKU-201ENST00000333090 CUL4AQ13619 759 aa28.71■■■□□ 2.19
TSKU-201ENST00000333090 PTMAP06454 111 aaKnown RBP28.7■■■□□ 2.19
TSKU-201ENST00000333090 RILPL2Q969X0 211 aa28.7■■■□□ 2.19
TSKU-201ENST00000333090 TRIM6-TRIM34B2RNG4 842 aa28.7■■■□□ 2.18
TSKU-201ENST00000333090 TSPY26PQ9H489 355 aa28.7■■■□□ 2.18
TSKU-201ENST00000333090 SPATA31D1Q6ZQQ2 1576 aa28.7■■■□□ 2.18
TSKU-201ENST00000333090 GNAI2P04899 355 aa28.68■■■□□ 2.18
TSKU-201ENST00000333090 CCT4P50991 539 aaKnown RBP28.68■■■□□ 2.18
TSKU-201ENST00000333090 GDPD2Q9HCC8 539 aa28.68■■■□□ 2.18
TSKU-201ENST00000333090 UPF3BQ9BZI7 483 aaKnown RBP28.68■■■□□ 2.18
TSKU-201ENST00000333090 MX1P20591 662 aa28.67■■■□□ 2.18
TSKU-201ENST00000333090 LRRCC1Q9C099 1032 aa28.67■■■□□ 2.18
TSKU-201ENST00000333090 SYAP1Q96A49 352 aaPredicted RBP28.67■■■□□ 2.18
TSKU-201ENST00000333090 SLC26A8Q96RN1 970 aa28.66■■■□□ 2.18
TSKU-201ENST00000333090 NRXN3Q9Y4C0 1643 aa28.66■■■□□ 2.18
TSKU-201ENST00000333090 SETD1AO15047 1707 aaKnown RBP28.66■■■□□ 2.18
TSKU-201ENST00000333090 HSP90AB2PQ58FF8 381 aa28.66■■■□□ 2.18
TSKU-201ENST00000333090 INTS4Q96HW7 963 aaKnown RBP28.66■■■□□ 2.18
TSKU-201ENST00000333090 AGLP35573 1532 aa28.65■■■□□ 2.18
TSKU-201ENST00000333090 CHMLP26374 656 aa28.65■■■□□ 2.18
TSKU-201ENST00000333090 TSPYL4Q9UJ04 414 aa28.65■■■□□ 2.18
TSKU-201ENST00000333090 PPP6R1Q9UPN7 881 aa28.65■■■□□ 2.18
TSKU-201ENST00000333090 SALL3Q9BXA9 1300 aa28.64■■■□□ 2.18
TSKU-201ENST00000333090 ANAPC15P60006 121 aa28.64■■■□□ 2.18
TSKU-201ENST00000333090 MAP7D2Q96T17 732 aa28.64■■■□□ 2.18
TSKU-201ENST00000333090 GADD45BO75293 160 aaPredicted RBP28.63■■■□□ 2.17
TSKU-201ENST00000333090 CRB1P82279 1406 aa28.63■■■□□ 2.17
TSKU-201ENST00000333090 ROBO2Q9HCK4 1378 aa28.63■■■□□ 2.17
TSKU-201ENST00000333090 FOXO3O43524 673 aa28.63■■■□□ 2.17
TSKU-201ENST00000333090 PNMA6EA0A0J9YXQ4 647 aa28.62■■■□□ 2.17
TSKU-201ENST00000333090 ZBTB7CA1YPR0 619 aa28.62■■■□□ 2.17
TSKU-201ENST00000333090 LTKP29376 864 aa28.62■■■□□ 2.17
TSKU-201ENST00000333090 SASS6Q6UVJ0 657 aa28.61■■■□□ 2.17
TSKU-201ENST00000333090 MON2Q7Z3U7 1717 aa28.61■■■□□ 2.17
TSKU-201ENST00000333090 RTF1Q92541 710 aaKnown RBP28.61■■■□□ 2.17
TSKU-201ENST00000333090 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.6■■■□□ 2.176e-6■□□□□ 11.1
TSKU-201ENST00000333090 DYNC1I1O14576 645 aa28.6■■■□□ 2.17
TSKU-201ENST00000333090 MPNDQ8N594 471 aa28.6■■■□□ 2.17
TSKU-201ENST00000333090 ARID3AQ99856 593 aa28.6■■■□□ 2.17
TSKU-201ENST00000333090 NRKQ7Z2Y5 1582 aa28.59■■■□□ 2.17
TSKU-201ENST00000333090 PHF14O94880 888 aa28.59■■■□□ 2.17
TSKU-201ENST00000333090 USP48Q86UV5 1035 aa28.59■■■□□ 2.17
TSKU-201ENST00000333090 UNC5CLQ8IV45 518 aa28.59■■■□□ 2.17
TSKU-201ENST00000333090 KIAA2012Q0VF49 1180 aa28.59■■■□□ 2.17
TSKU-201ENST00000333090 STK31Q9BXU1 1019 aa28.58■■■□□ 2.17
TSKU-201ENST00000333090 C3P01024 1663 aa28.58■■■□□ 2.17
TSKU-201ENST00000333090 TPRNQ4KMQ1 711 aa28.58■■■□□ 2.17
TSKU-201ENST00000333090 FKBP5Q13451 457 aaPredicted RBP28.57■■■□□ 2.16
TSKU-201ENST00000333090 TTC21BQ7Z4L5 1316 aa28.57■■■□□ 2.16
TSKU-201ENST00000333090 WDR33Q9C0J8 1336 aaKnown RBP28.57■■■□□ 2.16
TSKU-201ENST00000333090 TNRQ92752 1358 aa28.57■■■□□ 2.16
TSKU-201ENST00000333090 MTHFSDQ2M296 383 aaKnown RBP28.56■■■□□ 2.16
TSKU-201ENST00000333090 GNAI3P08754 354 aa28.56■■■□□ 2.16
TSKU-201ENST00000333090 NECTIN2Q92692 538 aa28.56■■■□□ 2.16
TSKU-201ENST00000333090 DNTTIP2Q5QJE6 756 aaKnown RBP28.55■■■□□ 2.16
TSKU-201ENST00000333090 IL25Q9H293 177 aa28.55■■■□□ 2.16
TSKU-201ENST00000333090 ATP8B2P98198 1209 aa28.55■■■□□ 2.16
TSKU-201ENST00000333090 SSH2Q76I76 1423 aa28.54■■■□□ 2.16
TSKU-201ENST00000333090 ACEP12821 1306 aa28.54■■■□□ 2.16
TSKU-201ENST00000333090 FLIIQ13045 1269 aa28.54■■■□□ 2.16
TSKU-201ENST00000333090 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
TSKU-201ENST00000333090 USP25Q9UHP3 1055 aa28.53■■■□□ 2.16
TSKU-201ENST00000333090 IL1RAPL2Q9NP60 686 aa28.53■■■□□ 2.16
TSKU-201ENST00000333090 STAP2Q9UGK3 403 aa28.53■■■□□ 2.16
TSKU-201ENST00000333090 LRRFIP2Q9Y608 721 aaKnown RBP28.53■■■□□ 2.16
TSKU-201ENST00000333090 ZNF830Q96NB3 372 aaPredicted RBP28.52■■■□□ 2.16
TSKU-201ENST00000333090 SRCIN1Q9C0H9 1055 aa28.52■■■□□ 2.16
TSKU-201ENST00000333090 TMEM2Q9UHN6 1383 aa28.52■■■□□ 2.16
TSKU-201ENST00000333090 ITSN1Q15811 1721 aa28.52■■■□□ 2.16
TSKU-201ENST00000333090 FAM184AQ8NB25 1140 aa28.51■■■□□ 2.15
TSKU-201ENST00000333090 AKAP12Q02952 1782 aa28.51■■■□□ 2.15
TSKU-201ENST00000333090 MTERF4Q7Z6M4 381 aaKnown RBP28.5■■■□□ 2.15
TSKU-201ENST00000333090 MAP4K4O95819 1239 aaPredicted RBP28.49■■■□□ 2.15
TSKU-201ENST00000333090 HSPA4P34932 840 aa28.49■■■□□ 2.15
TSKU-201ENST00000333090 CNPY2Q9Y2B0 182 aa28.49■■■□□ 2.15
TSKU-201ENST00000333090 NUTM1Q86Y26 1132 aa28.49■■■□□ 2.15
TSKU-201ENST00000333090 TCHHQ07283 1943 aa28.48■■■□□ 2.15
TSKU-201ENST00000333090 TUBGCP6Q96RT7 1819 aa28.48■■■□□ 2.15
TSKU-201ENST00000333090 IL17RAQ96F46 866 aa28.48■■■□□ 2.15
TSKU-201ENST00000333090 OVOS2A0A0J9YW53 1432 aa28.48■■■□□ 2.15
TSKU-201ENST00000333090 OVOS2Q6IE36 1432 aa28.48■■■□□ 2.15
TSKU-201ENST00000333090 CCDC183Q5T5S1 534 aa28.48■■■□□ 2.15
TSKU-201ENST00000333090 HCLS1P14317 486 aaPredicted RBP28.47■■■□□ 2.15
TSKU-201ENST00000333090 UVSSAQ2YD98 709 aa28.47■■■□□ 2.15
TSKU-201ENST00000333090 CCDC30Q5VVM6 783 aa28.47■■■□□ 2.15
TSKU-201ENST00000333090 LARP6Q9BRS8 491 aaKnown RBP28.47■■■□□ 2.15
TSKU-201ENST00000333090 RPAP1Q9BWH6 1393 aaPredicted RBP28.47■■■□□ 2.15
TSKU-201ENST00000333090 ADAMTS13Q76LX8 1427 aa28.46■■■□□ 2.15
TSKU-201ENST00000333090 ADCY5O95622 1261 aa28.46■■■□□ 2.15
TSKU-201ENST00000333090 HDGFP51858 240 aaKnown RBP28.46■■■□□ 2.15
TSKU-201ENST00000333090 TTC12Q9H892 705 aaPredicted RBP28.46■■■□□ 2.15
TSKU-201ENST00000333090 PEAK1Q9H792 1746 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms