RNA–Protein interactions for RNA: ENST00000330168.9

AC004997.1-201, humanhuman

TSL 2

Gene AC004997.1, Length 1,974 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004997.1-201ENST00000330168 PHKG2P15735 406 aa18.47■□□□□ 0.55
AC004997.1-201ENST00000330168 HDAC1Q13547 482 aaPredicted RBP18.47■□□□□ 0.55
AC004997.1-201ENST00000330168 STK31Q9BXU1 1019 aa18.47■□□□□ 0.55
AC004997.1-201ENST00000330168 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
AC004997.1-201ENST00000330168 COL5A2P05997 1499 aaPredicted RBP18.47■□□□□ 0.55
AC004997.1-201ENST00000330168 INTS3Q68E01 1043 aaKnown RBP18.46■□□□□ 0.55
AC004997.1-201ENST00000330168 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
AC004997.1-201ENST00000330168 KDM3BQ7LBC6 1761 aa18.46■□□□□ 0.55
AC004997.1-201ENST00000330168 PDE4AP27815 886 aa18.45■□□□□ 0.54
AC004997.1-201ENST00000330168 CHMP4BQ9H444 224 aaKnown RBP18.45■□□□□ 0.54
AC004997.1-201ENST00000330168 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
AC004997.1-201ENST00000330168 CYP27B1O15528 508 aa18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 KDM6AO15550 1401 aaPredicted RBP18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 IFNL2Q8IZJ0 200 aa18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
AC004997.1-201ENST00000330168 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
AC004997.1-201ENST00000330168 F6X3S4 739 aa18.43■□□□□ 0.54
AC004997.1-201ENST00000330168 PLEKHG2Q9H7P9 1386 aa18.43■□□□□ 0.54
AC004997.1-201ENST00000330168 FLIIQ13045 1269 aa18.42■□□□□ 0.54
AC004997.1-201ENST00000330168 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
AC004997.1-201ENST00000330168 BACH2Q9BYV9 841 aa18.42■□□□□ 0.54
AC004997.1-201ENST00000330168 EIF2S2P20042 333 aaKnown RBP18.42■□□□□ 0.54
AC004997.1-201ENST00000330168 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 HOXB7P09629 217 aa18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 EVA1CP58658 441 aa18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 CARD10Q9BWT7 1032 aa18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 SLC52A2Q9HAB3 445 aa18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 DEKP35659 375 aaKnown RBP18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 ANP32AP39687 249 aaKnown RBP18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
AC004997.1-201ENST00000330168 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
AC004997.1-201ENST00000330168 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
AC004997.1-201ENST00000330168 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
AC004997.1-201ENST00000330168 FKBP5Q13451 457 aaPredicted RBP18.39■□□□□ 0.53
AC004997.1-201ENST00000330168 SIRT2Q8IXJ6 389 aa18.39■□□□□ 0.53
AC004997.1-201ENST00000330168 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
AC004997.1-201ENST00000330168 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
AC004997.1-201ENST00000330168 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
AC004997.1-201ENST00000330168 PHAXQ9H814 394 aaKnown RBP18.39■□□□□ 0.53
AC004997.1-201ENST00000330168 SCN11AQ9UI33 1791 aa18.38■□□□□ 0.53
AC004997.1-201ENST00000330168 GIGYF1O75420 1035 aaPredicted RBP18.38■□□□□ 0.53
AC004997.1-201ENST00000330168 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
AC004997.1-201ENST00000330168 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
AC004997.1-201ENST00000330168 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
AC004997.1-201ENST00000330168 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
AC004997.1-201ENST00000330168 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
AC004997.1-201ENST00000330168 IPO9Q96P70 1041 aaKnown RBP18.37■□□□□ 0.53
AC004997.1-201ENST00000330168 IL2RBP14784 551 aa18.37■□□□□ 0.53
AC004997.1-201ENST00000330168 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
AC004997.1-201ENST00000330168 ZNF790Q6PG37 636 aa18.37■□□□□ 0.53
AC004997.1-201ENST00000330168 MEIS3Q99687 375 aa18.37■□□□□ 0.53
AC004997.1-201ENST00000330168 HSP90AB1P08238 724 aaKnown RBP18.36■□□□□ 0.53
AC004997.1-201ENST00000330168 ANXA1P04083 346 aa18.35■□□□□ 0.53
AC004997.1-201ENST00000330168 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
AC004997.1-201ENST00000330168 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
AC004997.1-201ENST00000330168 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
AC004997.1-201ENST00000330168 PCDH11XQ9BZA7 1347 aa18.34■□□□□ 0.53
AC004997.1-201ENST00000330168 PCDH11YQ9BZA8 1340 aa18.34■□□□□ 0.53
AC004997.1-201ENST00000330168 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
AC004997.1-201ENST00000330168 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
AC004997.1-201ENST00000330168 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
AC004997.1-201ENST00000330168 MRC1P22897 1456 aa18.34■□□□□ 0.53
AC004997.1-201ENST00000330168 PIP4K2BP78356 416 aa18.33■□□□□ 0.53
AC004997.1-201ENST00000330168 CACNA1FO60840 1977 aa18.33■□□□□ 0.53
AC004997.1-201ENST00000330168 CABP4P57796 275 aa18.33■□□□□ 0.52
AC004997.1-201ENST00000330168 NUCB1Q02818 461 aa18.32■□□□□ 0.52
AC004997.1-201ENST00000330168 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
AC004997.1-201ENST00000330168 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
AC004997.1-201ENST00000330168 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
AC004997.1-201ENST00000330168 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 TOM1O60784 492 aa18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 ANKRD44Q8N8A2 993 aa18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 COL14A1Q05707 1796 aaKnown RBP18.31■□□□□ 0.52
AC004997.1-201ENST00000330168 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
AC004997.1-201ENST00000330168 NKX1-1Q15270 411 aaPredicted RBP18.3■□□□□ 0.52
AC004997.1-201ENST00000330168 CEP85Q6P2H3 762 aa18.3■□□□□ 0.52
AC004997.1-201ENST00000330168 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
AC004997.1-201ENST00000330168 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
AC004997.1-201ENST00000330168 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 LNPKQ9C0E8 428 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 PXDNLA1KZ92 1463 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 ADAMTS2O95450 1211 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 PDIA6Q15084 440 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 SHANK3Q9BYB0 1731 aa18.28■□□□□ 0.52
AC004997.1-201ENST00000330168 ERVV-2B6SEH9 535 aa18.27■□□□□ 0.52
AC004997.1-201ENST00000330168 DCTPP1Q9H773 170 aa18.27■□□□□ 0.52
AC004997.1-201ENST00000330168 ADCY9O60503 1353 aa18.26■□□□□ 0.51
AC004997.1-201ENST00000330168 GNAI2P04899 355 aa18.26■□□□□ 0.51
AC004997.1-201ENST00000330168 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
AC004997.1-201ENST00000330168 USP44Q9H0E7 712 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms