RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
DNMT3B-202ENST00000328111 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
DNMT3B-202ENST00000328111 PDE1AP54750 535 aa16.45■□□□□ 0.22
DNMT3B-202ENST00000328111 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
DNMT3B-202ENST00000328111 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
DNMT3B-202ENST00000328111 BAG4O95429 457 aaKnown RBP16.44■□□□□ 0.22
DNMT3B-202ENST00000328111 IL13P35225 146 aa16.44■□□□□ 0.22
DNMT3B-202ENST00000328111 KRT85P78386 507 aa16.44■□□□□ 0.22
DNMT3B-202ENST00000328111 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
DNMT3B-202ENST00000328111 TRIM5Q9C035 493 aa16.44■□□□□ 0.22
DNMT3B-202ENST00000328111 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
DNMT3B-202ENST00000328111 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
DNMT3B-202ENST00000328111 GDPD2Q9HCC8 539 aa16.43■□□□□ 0.22
DNMT3B-202ENST00000328111 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
DNMT3B-202ENST00000328111 EYA1Q99502 592 aa16.43■□□□□ 0.22
DNMT3B-202ENST00000328111 MYD88Q99836 296 aa16.43■□□□□ 0.22
DNMT3B-202ENST00000328111 LETM1O95202 739 aaPredicted RBP16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 TTC21AQ8NDW8 1320 aa16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 CCDC158Q5M9N0 1113 aa16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
DNMT3B-202ENST00000328111 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 ZFYVE9O95405 1425 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 TTC37Q6PGP7 1564 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 PES1O00541 588 aaKnown RBP16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 CCDC57Q2TAC2 916 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 CNNM1Q9NRU3 951 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
DNMT3B-202ENST00000328111 ERVK-7P63135 1459 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 ERICH2A1L162 156 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
DNMT3B-202ENST00000328111 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 TPD52L1Q16890 204 aaPredicted RBP16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 G2E3Q7L622 706 aa16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 SNX21Q969T3 373 aa16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
DNMT3B-202ENST00000328111 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 PANK2Q9BZ23 570 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 MYO5CQ9NQX4 1742 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 TMX3Q96JJ7 454 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 LIMCH1Q9UPQ0 1083 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
DNMT3B-202ENST00000328111 BCORL1Q5H9F3 1711 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 FLT4P35916 1363 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 XRCC6P12956 609 aaKnown RBP eCLIP16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 RRP12Q5JTH9 1297 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 SPATA32Q96LK8 384 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 KDM5DQ9BY66 1539 aa16.37■□□□□ 0.21
DNMT3B-202ENST00000328111 A0A087WZG4 1122 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 ME1P48163 572 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 STK38Q15208 465 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 KRT32Q14532 448 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 ESYT1Q9BSJ8 1104 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 HOMER1Q86YM7 354 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 ZSCAN30Q86W11 494 aa16.36■□□□□ 0.21
DNMT3B-202ENST00000328111 G3V3G9 751 aa16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 KCNA6P17658 529 aa16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 CCAR2Q8N163 923 aaKnown RBP16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 CHL1O00533 1208 aa16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 STK11IPQ8N1F8 1099 aa16.35■□□□□ 0.21
DNMT3B-202ENST00000328111 SLC39A6Q13433 755 aa16.34■□□□□ 0.21
DNMT3B-202ENST00000328111 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
DNMT3B-202ENST00000328111 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
DNMT3B-202ENST00000328111 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
DNMT3B-202ENST00000328111 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.21
DNMT3B-202ENST00000328111 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
DNMT3B-202ENST00000328111 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.21
DNMT3B-202ENST00000328111 EDC4Q6P2E9 1401 aaKnown RBP16.33■□□□□ 0.21
DNMT3B-202ENST00000328111 MARCH6O60337 910 aa16.33■□□□□ 0.21
DNMT3B-202ENST00000328111 NAT10Q9H0A0 1025 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms