RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MIS18AQ9NYP9 233 aa24.28■■□□□ 1.48
EXOSC3-201ENST00000327304 ONECUT3O60422 494 aaPredicted RBP24.28■■□□□ 1.48
EXOSC3-201ENST00000327304 TEFQ10587 303 aa24.28■■□□□ 1.48
EXOSC3-201ENST00000327304 RGS17Q9UGC6 210 aaPredicted RBP24.28■■□□□ 1.48
EXOSC3-201ENST00000327304 TOGARAM1Q9Y4F4 1720 aa24.28■■□□□ 1.48
EXOSC3-201ENST00000327304 SIPA1L3O60292 1781 aaPredicted RBP24.27■■□□□ 1.48
EXOSC3-201ENST00000327304 MRC1P22897 1456 aa24.27■■□□□ 1.48
EXOSC3-201ENST00000327304 CHL1O00533 1208 aa24.27■■□□□ 1.48
EXOSC3-201ENST00000327304 TAF7Q15545 349 aaPredicted RBP24.27■■□□□ 1.48
EXOSC3-201ENST00000327304 MARCH10Q8NA82 808 aaPredicted RBP24.27■■□□□ 1.48
EXOSC3-201ENST00000327304 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
EXOSC3-201ENST00000327304 SEPT12Q8IYM1 358 aa24.24■■□□□ 1.47
EXOSC3-201ENST00000327304 TSPYL4Q9UJ04 414 aa24.24■■□□□ 1.47
EXOSC3-201ENST00000327304 RBM6P78332 1123 aaKnown RBP24.24■■□□□ 1.47
EXOSC3-201ENST00000327304 NFATC2IPQ8NCF5 419 aa24.23■■□□□ 1.47
EXOSC3-201ENST00000327304 EXOSC9Q06265 439 aaKnown RBP24.22■■□□□ 1.47
EXOSC3-201ENST00000327304 ERVV-2B6SEH9 535 aa24.21■■□□□ 1.47
EXOSC3-201ENST00000327304 CABP4P57796 275 aa24.21■■□□□ 1.47
EXOSC3-201ENST00000327304 KDM3BQ7LBC6 1761 aa24.21■■□□□ 1.47
EXOSC3-201ENST00000327304 BABAM1Q9NWV8 329 aa24.21■■□□□ 1.47
EXOSC3-201ENST00000327304 BTBD11A6QL63 1104 aa24.2■■□□□ 1.46
EXOSC3-201ENST00000327304 POTEAQ6S8J7 498 aa24.2■■□□□ 1.46
EXOSC3-201ENST00000327304 DOT1LQ8TEK3 1739 aa24.2■■□□□ 1.46
EXOSC3-201ENST00000327304 KCNQ3O43525 872 aa24.18■■□□□ 1.46
EXOSC3-201ENST00000327304 RXRBP28702 533 aa24.17■■□□□ 1.46
EXOSC3-201ENST00000327304 KRT24Q2M2I5 525 aa24.17■■□□□ 1.46
EXOSC3-201ENST00000327304 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.17■■□□□ 1.46
EXOSC3-201ENST00000327304 ITGB4P16144 1822 aa24.17■■□□□ 1.46
EXOSC3-201ENST00000327304 C8orf58Q8NAV2 365 aa24.17■■□□□ 1.46
EXOSC3-201ENST00000327304 BRWD3Q6RI45 1802 aa24.17■■□□□ 1.46
EXOSC3-201ENST00000327304 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
EXOSC3-201ENST00000327304 SLC39A6Q13433 755 aa24.15■■□□□ 1.46
EXOSC3-201ENST00000327304 FAM182BQ5T319 152 aa24.15■■□□□ 1.46
EXOSC3-201ENST00000327304 TMOD3Q9NYL9 352 aa24.15■■□□□ 1.46
EXOSC3-201ENST00000327304 ACSBG1Q96GR2 724 aa24.14■■□□□ 1.46
EXOSC3-201ENST00000327304 ELL2O00472 640 aaPredicted RBP24.14■■□□□ 1.45
EXOSC3-201ENST00000327304 PRIM1P49642 420 aaKnown RBP24.14■■□□□ 1.45
EXOSC3-201ENST00000327304 KAT6BQ8WYB5 2073 aa24.13■■□□□ 1.45
EXOSC3-201ENST00000327304 PIGBQ92521 554 aa24.13■■□□□ 1.45
EXOSC3-201ENST00000327304 PAPPAQ13219 1627 aa24.12■■□□□ 1.45
EXOSC3-201ENST00000327304 EIF4A1P60842 406 aaKnown RBP24.12■■□□□ 1.45
EXOSC3-201ENST00000327304 ZNF790Q6PG37 636 aa24.12■■□□□ 1.45
EXOSC3-201ENST00000327304 SYTL4Q96C24 671 aaPredicted RBP24.12■■□□□ 1.45
EXOSC3-201ENST00000327304 BCL9O00512 1426 aa24.12■■□□□ 1.45
EXOSC3-201ENST00000327304 RGS12O14924 1447 aa24.12■■□□□ 1.45
EXOSC3-201ENST00000327304 TWISTNBQ3B726 338 aaPredicted RBP24.11■■□□□ 1.45
EXOSC3-201ENST00000327304 PLIN1O60240 522 aa24.1■■□□□ 1.45
EXOSC3-201ENST00000327304 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
EXOSC3-201ENST00000327304 VAMP4O75379 141 aa24.1■■□□□ 1.45
EXOSC3-201ENST00000327304 CT47B1P0C2W7 299 aaPredicted RBP24.1■■□□□ 1.45
EXOSC3-201ENST00000327304 KRT27Q7Z3Y8 459 aa24.1■■□□□ 1.45
EXOSC3-201ENST00000327304 KCNQ2O43526 872 aa24.09■■□□□ 1.45
EXOSC3-201ENST00000327304 TTC5Q8N0Z6 440 aa24.08■■□□□ 1.45
EXOSC3-201ENST00000327304 EXOC6Q8TAG9 804 aa24.08■■□□□ 1.45
EXOSC3-201ENST00000327304 ASAP1Q9ULH1 1129 aa24.07■■□□□ 1.44
EXOSC3-201ENST00000327304 UBR2Q8IWV8 1755 aa24.07■■□□□ 1.44
EXOSC3-201ENST00000327304 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
EXOSC3-201ENST00000327304 ZNF496Q96IT1 587 aaPredicted RBP24.07■■□□□ 1.44
EXOSC3-201ENST00000327304 CCDC136Q96JN2 1154 aa24.07■■□□□ 1.44
EXOSC3-201ENST00000327304 HEG1Q9ULI3 1381 aa24.07■■□□□ 1.44
EXOSC3-201ENST00000327304 KCPQ6ZWJ8 1503 aa24.06■■□□□ 1.44
EXOSC3-201ENST00000327304 ATG3Q9NT62 314 aa24.06■■□□□ 1.44
EXOSC3-201ENST00000327304 NHSQ6T4R5 1651 aa24.05■■□□□ 1.44
EXOSC3-201ENST00000327304 PTF1AQ7RTS3 328 aa24.05■■□□□ 1.44
EXOSC3-201ENST00000327304 SBF2Q86WG5 1849 aa24.04■■□□□ 1.44
EXOSC3-201ENST00000327304 BCAR3O75815 825 aa24.04■■□□□ 1.44
EXOSC3-201ENST00000327304 BCL2L13Q9BXK5 485 aa24.04■■□□□ 1.44
EXOSC3-201ENST00000327304 SSH1Q8WYL5 1049 aa24.03■■□□□ 1.44
EXOSC3-201ENST00000327304 FMNL2Q96PY5 1086 aa24.03■■□□□ 1.44
EXOSC3-201ENST00000327304 C5P01031 1676 aa24.03■■□□□ 1.44
EXOSC3-201ENST00000327304 PRAMEF22A3QJZ6 481 aa24.03■■□□□ 1.44
EXOSC3-201ENST00000327304 GIGYF1O75420 1035 aaPredicted RBP24.03■■□□□ 1.44
EXOSC3-201ENST00000327304 TCERG1O14776 1098 aaKnown RBP24.02■■□□□ 1.44
EXOSC3-201ENST00000327304 PTCD1O75127 700 aaKnown RBP24.02■■□□□ 1.44
EXOSC3-201ENST00000327304 CRBNQ96SW2 442 aa24.02■■□□□ 1.44
EXOSC3-201ENST00000327304 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
EXOSC3-201ENST00000327304 SOS1Q07889 1333 aaPredicted RBP24.01■■□□□ 1.43
EXOSC3-201ENST00000327304 FAM196AQ6ZSG2 479 aa24■■□□□ 1.43
EXOSC3-201ENST00000327304 HOXB7P09629 217 aa24■■□□□ 1.43
EXOSC3-201ENST00000327304 C20orf194Q5TEA3 1177 aa24■■□□□ 1.43
EXOSC3-201ENST00000327304 NECTIN2Q92692 538 aa24■■□□□ 1.43
EXOSC3-201ENST00000327304 SMC4Q9NTJ3 1288 aa24■■□□□ 1.43
EXOSC3-201ENST00000327304 BTAF1O14981 1849 aa23.99■■□□□ 1.43
EXOSC3-201ENST00000327304 PDE3AQ14432 1141 aa23.99■■□□□ 1.43
EXOSC3-201ENST00000327304 ALDH1L2Q3SY69 923 aa23.99■■□□□ 1.43
EXOSC3-201ENST00000327304 SNRPA1P09661 255 aaKnown RBP23.98■■□□□ 1.43
EXOSC3-201ENST00000327304 HDGFL1Q5TGJ6 251 aa23.98■■□□□ 1.43
EXOSC3-201ENST00000327304 EP400Q96L91 3159 aa23.98■■□□□ 1.43
EXOSC3-201ENST00000327304 EIF2S2P20042 333 aaKnown RBP23.97■■□□□ 1.43
EXOSC3-201ENST00000327304 RBM42Q9BTD8 480 aaKnown RBP23.97■■□□□ 1.43
EXOSC3-201ENST00000327304 MRPL50Q8N5N7 158 aaKnown RBP23.96■■□□□ 1.43
EXOSC3-201ENST00000327304 PALLDQ8WX93 1383 aa23.96■■□□□ 1.43
EXOSC3-201ENST00000327304 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.42
EXOSC3-201ENST00000327304 SLC4A9Q96Q91 983 aa23.95■■□□□ 1.42
EXOSC3-201ENST00000327304 LAMB4A4D0S4 1761 aa23.95■■□□□ 1.42
EXOSC3-201ENST00000327304 BCL11BQ9C0K0 894 aaPredicted RBP23.94■■□□□ 1.42
EXOSC3-201ENST00000327304 USP16Q9Y5T5 823 aa23.94■■□□□ 1.42
EXOSC3-201ENST00000327304 SMARCC1Q92922 1105 aaPredicted RBP23.94■■□□□ 1.42
EXOSC3-201ENST00000327304 TRIM37O94972 964 aa23.92■■□□□ 1.42
EXOSC3-201ENST00000327304 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms