RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MYD88Q99836 296 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 TXLNBQ8N3L3 684 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 DDX11Q96FC9 970 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 ZFYVE27Q5T4F4 411 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 LEKR1Q6ZMV7 388 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 CEP131Q9UPN4 1083 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 SH2B1Q9NRF2 756 aaPredicted RBP12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 WASLO00401 505 aaPredicted RBP12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 SYCP1Q15431 976 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 SSFA2P28290 1259 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 RAI14Q9P0K7 980 aa12.82□□□□□ -0.36
SNRNP200-201ENST00000323853 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 USHBP1Q8N6Y0 703 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 ZSCAN30Q86W11 494 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 DUOX2Q9NRD8 1548 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 IL16Q14005 1332 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 FANCAO15360 1455 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 GPATCH8Q9UKJ3 1502 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 ATP2B2Q01814 1243 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 SKIDA1Q1XH10 827 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 F6X3S4 739 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 IGHDP01880 384 aa12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 RDXP35241 583 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
SNRNP200-201ENST00000323853 CCDC181Q5TID7 509 aa12.8□□□□□ -0.36
SNRNP200-201ENST00000323853 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
SNRNP200-201ENST00000323853 LUC7LQ9NQ29 371 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-201ENST00000323853 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
SNRNP200-201ENST00000323853 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
SNRNP200-201ENST00000323853 ERLIN1O75477 346 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 FAM177A1Q8N128 213 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 TBC1D9Q6ZT07 1266 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 STARD3NLO95772 234 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 ERLIN2O94905 339 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 HMGB1P09429 215 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
SNRNP200-201ENST00000323853 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 NUP160Q12769 1436 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 H0YHG0 523 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 TTC22Q5TAA0 569 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
SNRNP200-201ENST00000323853 IQCEQ6IPM2 695 aa12.77□□□□□ -0.36
SNRNP200-201ENST00000323853 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.36
SNRNP200-201ENST00000323853 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.36
SNRNP200-201ENST00000323853 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.36
SNRNP200-201ENST00000323853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.361e-8■■■■■ 65
SNRNP200-201ENST00000323853 FERMT3Q86UX7 667 aa12.77□□□□□ -0.36
SNRNP200-201ENST00000323853 EIF3JO75822 258 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-201ENST00000323853 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
SNRNP200-201ENST00000323853 EVI5LQ96CN4 794 aa12.77□□□□□ -0.37
SNRNP200-201ENST00000323853 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
SNRNP200-201ENST00000323853 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 NUCB1Q02818 461 aa12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 TCOF1Q13428 1488 aaKnown RBP12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 FLIIQ13045 1269 aa12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 TMOD3Q9NYL9 352 aa12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-201ENST00000323853 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 PRAG1Q86YV5 1406 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 PIK3R4Q99570 1358 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 GJB2P29033 226 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 EPB41L2O43491 1005 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 RRP9O43818 475 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
SNRNP200-201ENST00000323853 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
SNRNP200-201ENST00000323853 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms