RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 TBC1D2Q9BYX2 928 aa15.01□□□□□ -0.01
NCL-201ENST00000322723 NFKBIBQ15653 356 aa15.01□□□□□ -0.01
NCL-201ENST00000322723 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
NCL-201ENST00000322723 C1orf115Q9H7X2 142 aa15.01□□□□□ -0.01
NCL-201ENST00000322723 AK9Q5TCS8 1911 aa15□□□□□ -0.01
NCL-201ENST00000322723 OSBPL3Q9H4L5 887 aa15□□□□□ -0.01
NCL-201ENST00000322723 GSPT1P15170 499 aaKnown RBP15□□□□□ -0.01
NCL-201ENST00000322723 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
NCL-201ENST00000322723 G2E3Q7L622 706 aa15□□□□□ -0.01
NCL-201ENST00000322723 C22orf23Q9BZE7 217 aa15□□□□□ -0.01
NCL-201ENST00000322723 TSPYL4Q9UJ04 414 aa15□□□□□ -0.01
NCL-201ENST00000322723 LNPKQ9C0E8 428 aa14.99□□□□□ -0.01
NCL-201ENST00000322723 NBPF6Q5VWK0 638 aa14.99□□□□□ -0.01
NCL-201ENST00000322723 NBPF4Q96M43 638 aa14.99□□□□□ -0.01
NCL-201ENST00000322723 ARID3AQ99856 593 aa14.99□□□□□ -0.01
NCL-201ENST00000322723 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
NCL-201ENST00000322723 TAF7Q15545 349 aaPredicted RBP14.98□□□□□ -0.01
NCL-201ENST00000322723 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
NCL-201ENST00000322723 BECN1Q14457 450 aa14.98□□□□□ -0.01
NCL-201ENST00000322723 MEIS3Q99687 375 aa14.97□□□□□ -0.01
NCL-201ENST00000322723 NHSL1Q5SYE7 1610 aa14.97□□□□□ -0.01
NCL-201ENST00000322723 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
NCL-201ENST00000322723 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
NCL-201ENST00000322723 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
NCL-201ENST00000322723 TTC22Q5TAA0 569 aa14.97□□□□□ -0.01
NCL-201ENST00000322723 UPF2Q9HAU5 1272 aaKnown RBP14.97□□□□□ -0.01
NCL-201ENST00000322723 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
NCL-201ENST00000322723 IL17RAQ96F46 866 aa14.96□□□□□ -0.01
NCL-201ENST00000322723 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.01
NCL-201ENST00000322723 ANKRD45Q5TZF3 282 aa14.96□□□□□ -0.01
NCL-201ENST00000322723 MIS18AQ9NYP9 233 aa14.95□□□□□ -0.02
NCL-201ENST00000322723 CCDC30Q5VVM6 783 aa14.95□□□□□ -0.02
NCL-201ENST00000322723 TBC1D9Q6ZT07 1266 aa14.95□□□□□ -0.02
NCL-201ENST00000322723 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
NCL-201ENST00000322723 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
NCL-201ENST00000322723 ARFGEF2Q9Y6D5 1785 aa14.94□□□□□ -0.02
NCL-201ENST00000322723 FLIIQ13045 1269 aa14.94□□□□□ -0.02
NCL-201ENST00000322723 GZF1Q9H116 711 aaPredicted RBP14.94□□□□□ -0.02
NCL-201ENST00000322723 GCP02774 474 aa14.93□□□□□ -0.02
NCL-201ENST00000322723 ORAI2Q96SN7 254 aa14.93□□□□□ -0.02
NCL-201ENST00000322723 PODXL2Q9NZ53 605 aa14.93□□□□□ -0.02
NCL-201ENST00000322723 CPDO75976 1380 aa14.93□□□□□ -0.02
NCL-201ENST00000322723 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
NCL-201ENST00000322723 NUTM2GQ5VZR2 741 aa14.93□□□□□ -0.02
NCL-201ENST00000322723 KDM6AO15550 1401 aaPredicted RBP14.93□□□□□ -0.02
NCL-201ENST00000322723 ESCO1Q5FWF5 840 aa14.92□□□□□ -0.02
NCL-201ENST00000322723 SOX12O15370 315 aa14.92□□□□□ -0.02
NCL-201ENST00000322723 AMOTQ4VCS5 1084 aa14.92□□□□□ -0.02
NCL-201ENST00000322723 WNK3Q9BYP7 1800 aa14.91□□□□□ -0.02
NCL-201ENST00000322723 CDC45O75419 566 aa14.91□□□□□ -0.02
NCL-201ENST00000322723 C19orf44Q9H6X5 657 aa14.91□□□□□ -0.02
NCL-201ENST00000322723 POLA2Q14181 598 aa14.91□□□□□ -0.02
NCL-201ENST00000322723 ADCY9O60503 1353 aa14.91□□□□□ -0.02
NCL-201ENST00000322723 AOX1Q06278 1338 aa14.91□□□□□ -0.02
NCL-201ENST00000322723 PSME1Q06323 249 aa14.9□□□□□ -0.02
NCL-201ENST00000322723 TJP1Q07157 1748 aa14.9□□□□□ -0.02
NCL-201ENST00000322723 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
NCL-201ENST00000322723 MEGF6O75095 1541 aa14.9□□□□□ -0.02
NCL-201ENST00000322723 MFAP1P55081 439 aaKnown RBP14.9□□□□□ -0.02
NCL-201ENST00000322723 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
NCL-201ENST00000322723 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
NCL-201ENST00000322723 ERBB3P21860 1342 aa14.9□□□□□ -0.02
NCL-201ENST00000322723 AFDNP55196 1824 aaKnown RBP14.9□□□□□ -0.02
NCL-201ENST00000322723 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 PLCH1Q4KWH8 1693 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
NCL-201ENST00000322723 LGR6Q9HBX8 967 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 GNAI2P04899 355 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 USHBP1Q8N6Y0 703 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 AXIN2Q9Y2T1 843 aa14.89□□□□□ -0.03
NCL-201ENST00000322723 F6X3S4 739 aa14.88□□□□□ -0.03
NCL-201ENST00000322723 TRIM44Q96DX7 344 aaPredicted RBP14.88□□□□□ -0.03
NCL-201ENST00000322723 GNAI3P08754 354 aa14.88□□□□□ -0.03
NCL-201ENST00000322723 SSH3Q8TE77 659 aa14.88□□□□□ -0.03
NCL-201ENST00000322723 TMEM94Q12767 1356 aa14.88□□□□□ -0.03
NCL-201ENST00000322723 FRAT2O75474 233 aaPredicted RBP14.88□□□□□ -0.03
NCL-201ENST00000322723 C16orf71Q8IYS4 520 aaPredicted RBP14.87□□□□□ -0.03
NCL-201ENST00000322723 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
NCL-201ENST00000322723 STK31Q9BXU1 1019 aa14.87□□□□□ -0.03
NCL-201ENST00000322723 UTYO14607 1347 aa14.87□□□□□ -0.03
NCL-201ENST00000322723 KRT28Q7Z3Y7 464 aa14.87□□□□□ -0.03
NCL-201ENST00000322723 USP42Q9H9J4 1324 aaKnown RBP14.87□□□□□ -0.03
NCL-201ENST00000322723 HMMRO75330 724 aa14.86□□□□□ -0.03
NCL-201ENST00000322723 MTX1Q13505 466 aa14.86□□□□□ -0.03
NCL-201ENST00000322723 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
NCL-201ENST00000322723 ANKRD24Q8TF21 1146 aa14.86□□□□□ -0.03
NCL-201ENST00000322723 RBM33Q96EV2 1170 aaKnown RBP14.86□□□□□ -0.03
NCL-201ENST00000322723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.86□□□□□ -0.037e-16■■■■□ 23.1
NCL-201ENST00000322723 BEND3Q5T5X7 828 aa14.86□□□□□ -0.03
NCL-201ENST00000322723 LRRC59Q96AG4 307 aaKnown RBP14.86□□□□□ -0.03
NCL-201ENST00000322723 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
NCL-201ENST00000322723 CLEC17AQ6ZS10 378 aa14.85□□□□□ -0.03
NCL-201ENST00000322723 CHMP4AQ9BY43 222 aa14.85□□□□□ -0.03
NCL-201ENST00000322723 SDSP20132 328 aa14.85□□□□□ -0.03
NCL-201ENST00000322723 ZMYND15Q9H091 742 aa14.85□□□□□ -0.03
NCL-201ENST00000322723 CIZ1Q9ULV3 898 aaPredicted RBP14.85□□□□□ -0.03
NCL-201ENST00000322723 COL15A1P39059 1388 aa14.85□□□□□ -0.03
NCL-201ENST00000322723 PNMA6EA0A0J9YXQ4 647 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms