RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 VPS72Q15906 364 aa12.99□□□□□ -0.33
GINS3-201ENST00000318129 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
GINS3-201ENST00000318129 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
GINS3-201ENST00000318129 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
GINS3-201ENST00000318129 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 MPRIPQ6WCQ1 1025 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
GINS3-201ENST00000318129 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 USP21Q9UK80 565 aa12.97□□□□□ -0.33
GINS3-201ENST00000318129 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
GINS3-201ENST00000318129 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
GINS3-201ENST00000318129 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.96□□□□□ -0.33
GINS3-201ENST00000318129 CYP27B1O15528 508 aa12.96□□□□□ -0.34
GINS3-201ENST00000318129 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.34
GINS3-201ENST00000318129 TEFQ10587 303 aa12.96□□□□□ -0.34
GINS3-201ENST00000318129 LGR6Q9HBX8 967 aa12.96□□□□□ -0.34
GINS3-201ENST00000318129 EXOC5O00471 708 aa12.95□□□□□ -0.34
GINS3-201ENST00000318129 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
GINS3-201ENST00000318129 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
GINS3-201ENST00000318129 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
GINS3-201ENST00000318129 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
GINS3-201ENST00000318129 ZMYND15Q9H091 742 aa12.94□□□□□ -0.34
GINS3-201ENST00000318129 WNK3Q9BYP7 1800 aa12.94□□□□□ -0.34
GINS3-201ENST00000318129 AFF2P51816 1311 aa12.93□□□□□ -0.34
GINS3-201ENST00000318129 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
GINS3-201ENST00000318129 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
GINS3-201ENST00000318129 VIRMAQ69YN4 1812 aaKnown RBP12.93□□□□□ -0.34
GINS3-201ENST00000318129 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
GINS3-201ENST00000318129 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
GINS3-201ENST00000318129 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
GINS3-201ENST00000318129 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
GINS3-201ENST00000318129 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
GINS3-201ENST00000318129 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
GINS3-201ENST00000318129 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
GINS3-201ENST00000318129 DDB1Q16531 1140 aa12.91□□□□□ -0.34
GINS3-201ENST00000318129 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
GINS3-201ENST00000318129 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
GINS3-201ENST00000318129 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
GINS3-201ENST00000318129 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
GINS3-201ENST00000318129 CABP4P57796 275 aa12.91□□□□□ -0.34
GINS3-201ENST00000318129 VAMP4O75379 141 aa12.9□□□□□ -0.34
GINS3-201ENST00000318129 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
GINS3-201ENST00000318129 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
GINS3-201ENST00000318129 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
GINS3-201ENST00000318129 ATRNO75882 1429 aa12.9□□□□□ -0.34
GINS3-201ENST00000318129 MRC1P22897 1456 aa12.9□□□□□ -0.35
GINS3-201ENST00000318129 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.35
GINS3-201ENST00000318129 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.35
GINS3-201ENST00000318129 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.35
GINS3-201ENST00000318129 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.35
GINS3-201ENST00000318129 CHMP4AQ9BY43 222 aa12.9□□□□□ -0.35
GINS3-201ENST00000318129 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
GINS3-201ENST00000318129 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
GINS3-201ENST00000318129 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
GINS3-201ENST00000318129 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
GINS3-201ENST00000318129 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
GINS3-201ENST00000318129 ZNF772Q68DY9 489 aaPredicted RBP12.87□□□□□ -0.35
GINS3-201ENST00000318129 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
GINS3-201ENST00000318129 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
GINS3-201ENST00000318129 HOXB7P09629 217 aa12.87□□□□□ -0.35
GINS3-201ENST00000318129 EIF4A1P60842 406 aaKnown RBP12.87□□□□□ -0.35
GINS3-201ENST00000318129 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
GINS3-201ENST00000318129 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
GINS3-201ENST00000318129 BCAR3O75815 825 aa12.86□□□□□ -0.35
GINS3-201ENST00000318129 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
GINS3-201ENST00000318129 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
GINS3-201ENST00000318129 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
GINS3-201ENST00000318129 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
GINS3-201ENST00000318129 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
GINS3-201ENST00000318129 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
GINS3-201ENST00000318129 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
GINS3-201ENST00000318129 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
GINS3-201ENST00000318129 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
GINS3-201ENST00000318129 GLI3P10071 1580 aa12.84□□□□□ -0.35
GINS3-201ENST00000318129 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
GINS3-201ENST00000318129 A0A0G2JS52 829 aa12.84□□□□□ -0.35
GINS3-201ENST00000318129 KCNQ3O43525 872 aa12.84□□□□□ -0.35
GINS3-201ENST00000318129 CANXP27824 592 aaKnown RBP12.84□□□□□ -0.35
GINS3-201ENST00000318129 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
GINS3-201ENST00000318129 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
GINS3-201ENST00000318129 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
GINS3-201ENST00000318129 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.35
GINS3-201ENST00000318129 HEG1Q9ULI3 1381 aa12.83□□□□□ -0.36
GINS3-201ENST00000318129 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
GINS3-201ENST00000318129 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 PLIN1O60240 522 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
GINS3-201ENST00000318129 SLC39A6Q13433 755 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 STK31Q9BXU1 1019 aa12.82□□□□□ -0.36
GINS3-201ENST00000318129 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms