RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 ONECUT3O60422 494 aaPredicted RBP20.9■□□□□ 0.94
TUBB3-201ENST00000315491 EXOSC9Q06265 439 aaKnown RBP20.9■□□□□ 0.94
TUBB3-201ENST00000315491 VIRMAQ69YN4 1812 aaKnown RBP20.89■□□□□ 0.93
TUBB3-201ENST00000315491 ERVV-2B6SEH9 535 aa20.88■□□□□ 0.93
TUBB3-201ENST00000315491 BTBD11A6QL63 1104 aa20.87■□□□□ 0.93
TUBB3-201ENST00000315491 CABP4P57796 275 aa20.87■□□□□ 0.93
TUBB3-201ENST00000315491 MARCH10Q8NA82 808 aaPredicted RBP20.87■□□□□ 0.93
TUBB3-201ENST00000315491 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
TUBB3-201ENST00000315491 BCL11AQ9H165 835 aa20.87■□□□□ 0.93
TUBB3-201ENST00000315491 RCAN3Q9UKA8 241 aa20.86■□□□□ 0.93
TUBB3-201ENST00000315491 SIPA1L3O60292 1781 aaPredicted RBP20.86■□□□□ 0.93
TUBB3-201ENST00000315491 RBM6P78332 1123 aaKnown RBP20.85■□□□□ 0.93
TUBB3-201ENST00000315491 SEPT12Q8IYM1 358 aa20.85■□□□□ 0.93
TUBB3-201ENST00000315491 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
TUBB3-201ENST00000315491 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
TUBB3-201ENST00000315491 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.93
TUBB3-201ENST00000315491 RGS17Q9UGC6 210 aaPredicted RBP20.83■□□□□ 0.93
TUBB3-201ENST00000315491 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
TUBB3-201ENST00000315491 C8orf58Q8NAV2 365 aa20.82■□□□□ 0.92
TUBB3-201ENST00000315491 KCNQ3O43525 872 aa20.82■□□□□ 0.92
TUBB3-201ENST00000315491 KRT24Q2M2I5 525 aa20.81■□□□□ 0.92
TUBB3-201ENST00000315491 TWISTNBQ3B726 338 aaPredicted RBP20.81■□□□□ 0.92
TUBB3-201ENST00000315491 TSPYL6Q8N831 410 aa20.81■□□□□ 0.92
TUBB3-201ENST00000315491 TMOD3Q9NYL9 352 aa20.81■□□□□ 0.92
TUBB3-201ENST00000315491 ELL2O00472 640 aaPredicted RBP20.8■□□□□ 0.92
TUBB3-201ENST00000315491 VAMP4O75379 141 aa20.8■□□□□ 0.92
TUBB3-201ENST00000315491 RXRBP28702 533 aa20.8■□□□□ 0.92
TUBB3-201ENST00000315491 EIF4A1P60842 406 aaKnown RBP20.8■□□□□ 0.92
TUBB3-201ENST00000315491 SLC39A6Q13433 755 aa20.8■□□□□ 0.92
TUBB3-201ENST00000315491 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
TUBB3-201ENST00000315491 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
TUBB3-201ENST00000315491 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.92
TUBB3-201ENST00000315491 RARSP54136 660 aaKnown RBP20.77■□□□□ 0.92
TUBB3-201ENST00000315491 TTC5Q8N0Z6 440 aa20.77■□□□□ 0.92
TUBB3-201ENST00000315491 PIGBQ92521 554 aa20.77■□□□□ 0.92
TUBB3-201ENST00000315491 ZNF428Q96B54 188 aa20.77■□□□□ 0.92
TUBB3-201ENST00000315491 POTEAQ6S8J7 498 aa20.77■□□□□ 0.91
TUBB3-201ENST00000315491 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.91
TUBB3-201ENST00000315491 ACSBG1Q96GR2 724 aa20.77■□□□□ 0.91
TUBB3-201ENST00000315491 BCL9O00512 1426 aa20.77■□□□□ 0.91
TUBB3-201ENST00000315491 SOS1Q07889 1333 aaPredicted RBP20.76■□□□□ 0.91
TUBB3-201ENST00000315491 ITGB4P16144 1822 aa20.75■□□□□ 0.91
TUBB3-201ENST00000315491 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
TUBB3-201ENST00000315491 PAPPAQ13219 1627 aa20.74■□□□□ 0.91
TUBB3-201ENST00000315491 BCAR3O75815 825 aa20.74■□□□□ 0.91
TUBB3-201ENST00000315491 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
TUBB3-201ENST00000315491 KRT27Q7Z3Y8 459 aa20.74■□□□□ 0.91
TUBB3-201ENST00000315491 HOXB7P09629 217 aa20.73■□□□□ 0.91
TUBB3-201ENST00000315491 FAM182BQ5T319 152 aa20.73■□□□□ 0.91
TUBB3-201ENST00000315491 SSH1Q8WYL5 1049 aa20.73■□□□□ 0.91
TUBB3-201ENST00000315491 ZNF496Q96IT1 587 aaPredicted RBP20.73■□□□□ 0.91
TUBB3-201ENST00000315491 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
TUBB3-201ENST00000315491 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
TUBB3-201ENST00000315491 BCL2L13Q9BXK5 485 aa20.72■□□□□ 0.91
TUBB3-201ENST00000315491 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
TUBB3-201ENST00000315491 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
TUBB3-201ENST00000315491 RRP1P56182 461 aaKnown RBP20.72■□□□□ 0.91
TUBB3-201ENST00000315491 SMC4Q9NTJ3 1288 aa20.72■□□□□ 0.91
TUBB3-201ENST00000315491 ASAP1Q9ULH1 1129 aa20.71■□□□□ 0.91
TUBB3-201ENST00000315491 RGS12O14924 1447 aa20.71■□□□□ 0.91
TUBB3-201ENST00000315491 KCNQ2O43526 872 aa20.7■□□□□ 0.9
TUBB3-201ENST00000315491 KCPQ6ZWJ8 1503 aa20.7■□□□□ 0.9
TUBB3-201ENST00000315491 BRWD3Q6RI45 1802 aa20.7■□□□□ 0.9
TUBB3-201ENST00000315491 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
TUBB3-201ENST00000315491 TCERG1O14776 1098 aaKnown RBP20.69■□□□□ 0.9
TUBB3-201ENST00000315491 SNRPA1P09661 255 aaKnown RBP20.68■□□□□ 0.9
TUBB3-201ENST00000315491 HDGFL1Q5TGJ6 251 aa20.68■□□□□ 0.9
TUBB3-201ENST00000315491 CCDC30Q5VVM6 783 aa20.68■□□□□ 0.9
TUBB3-201ENST00000315491 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
TUBB3-201ENST00000315491 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.68■□□□□ 0.9
TUBB3-201ENST00000315491 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
TUBB3-201ENST00000315491 PTCD1O75127 700 aaKnown RBP20.67■□□□□ 0.9
TUBB3-201ENST00000315491 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
TUBB3-201ENST00000315491 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
TUBB3-201ENST00000315491 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
TUBB3-201ENST00000315491 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
TUBB3-201ENST00000315491 BRPF1P55201 1214 aaPredicted RBP20.67■□□□□ 0.9
TUBB3-201ENST00000315491 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
TUBB3-201ENST00000315491 PLIN1O60240 522 aa20.66■□□□□ 0.9
TUBB3-201ENST00000315491 NECTIN2Q92692 538 aa20.66■□□□□ 0.9
TUBB3-201ENST00000315491 STK31Q9BXU1 1019 aa20.65■□□□□ 0.9
TUBB3-201ENST00000315491 FRAT1Q92837 279 aaPredicted RBP20.64■□□□□ 0.9
TUBB3-201ENST00000315491 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.9
TUBB3-201ENST00000315491 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.9
TUBB3-201ENST00000315491 C5P01031 1676 aa20.64■□□□□ 0.89
TUBB3-201ENST00000315491 KIF16BQ96L93 1317 aa20.64■□□□□ 0.89
TUBB3-201ENST00000315491 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
TUBB3-201ENST00000315491 PTF1AQ7RTS3 328 aa20.64■□□□□ 0.89
TUBB3-201ENST00000315491 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.89
TUBB3-201ENST00000315491 SLC4A2P04920 1241 aa20.63■□□□□ 0.89
TUBB3-201ENST00000315491 NEFLP07196 543 aa20.63■□□□□ 0.89
TUBB3-201ENST00000315491 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
TUBB3-201ENST00000315491 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
TUBB3-201ENST00000315491 PALLDQ8WX93 1383 aa20.62■□□□□ 0.89
TUBB3-201ENST00000315491 BCL11BQ9C0K0 894 aaPredicted RBP20.62■□□□□ 0.89
TUBB3-201ENST00000315491 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
TUBB3-201ENST00000315491 ZKSCAN2Q63HK3 967 aa20.61■□□□□ 0.89
TUBB3-201ENST00000315491 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
TUBB3-201ENST00000315491 IPO8O15397 1037 aaKnown RBP20.6■□□□□ 0.89
TUBB3-201ENST00000315491 SLC4A9Q96Q91 983 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms