RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 AK7Q96M32 723 aa11.47□□□□□ -0.57
MSL3-201ENST00000312196 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.57
MSL3-201ENST00000312196 NLGN2Q8NFZ4 835 aa11.46□□□□□ -0.57
MSL3-201ENST00000312196 KDM6AO15550 1401 aaPredicted RBP11.46□□□□□ -0.58
MSL3-201ENST00000312196 TGFB2P61812 414 aa11.46□□□□□ -0.58
MSL3-201ENST00000312196 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
MSL3-201ENST00000312196 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
MSL3-201ENST00000312196 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
MSL3-201ENST00000312196 SIK1P57059 783 aa11.44□□□□□ -0.58
MSL3-201ENST00000312196 ATG3Q9NT62 314 aa11.44□□□□□ -0.58
MSL3-201ENST00000312196 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
MSL3-201ENST00000312196 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
MSL3-201ENST00000312196 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
MSL3-201ENST00000312196 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
MSL3-201ENST00000312196 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
MSL3-201ENST00000312196 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
MSL3-201ENST00000312196 TJP1Q07157 1748 aa11.43□□□□□ -0.58
MSL3-201ENST00000312196 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
MSL3-201ENST00000312196 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
MSL3-201ENST00000312196 C1orf141Q5JVX7 400 aa11.42□□□□□ -0.58
MSL3-201ENST00000312196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.41□□□□□ -0.58
MSL3-201ENST00000312196 LINC00116Q8NCU8 138 aa11.41□□□□□ -0.58
MSL3-201ENST00000312196 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
MSL3-201ENST00000312196 KIAA1551Q9HCM1 1747 aa11.41□□□□□ -0.58
MSL3-201ENST00000312196 MSH5O43196 834 aa11.41□□□□□ -0.58
MSL3-201ENST00000312196 DIAPH1O60610 1272 aaKnown RBP11.41□□□□□ -0.58
MSL3-201ENST00000312196 RPS6KA4O75676 772 aa11.41□□□□□ -0.58
MSL3-201ENST00000312196 MTHFSP49914 203 aa11.41□□□□□ -0.58
MSL3-201ENST00000312196 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
MSL3-201ENST00000312196 CABP4P57796 275 aa11.4□□□□□ -0.58
MSL3-201ENST00000312196 SULT6B1Q6IMI4 303 aa11.4□□□□□ -0.58
MSL3-201ENST00000312196 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
MSL3-201ENST00000312196 ITPK1Q13572 414 aa11.4□□□□□ -0.59
MSL3-201ENST00000312196 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.59
MSL3-201ENST00000312196 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.59
MSL3-201ENST00000312196 KCNQ4P56696 695 aa11.39□□□□□ -0.59
MSL3-201ENST00000312196 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
MSL3-201ENST00000312196 RTCBQ9Y3I0 505 aaKnown RBP11.39□□□□□ -0.59
MSL3-201ENST00000312196 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
MSL3-201ENST00000312196 C4AP0C0L4 1744 aa11.39□□□□□ -0.59
MSL3-201ENST00000312196 HSPA6P17066 643 aa11.38□□□□□ -0.59
MSL3-201ENST00000312196 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
MSL3-201ENST00000312196 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
MSL3-201ENST00000312196 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
MSL3-201ENST00000312196 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
MSL3-201ENST00000312196 ATP6V1AP38606 617 aa11.38□□□□□ -0.59
MSL3-201ENST00000312196 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
MSL3-201ENST00000312196 RNMTO43148 476 aaKnown RBP11.37□□□□□ -0.59
MSL3-201ENST00000312196 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
MSL3-201ENST00000312196 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
MSL3-201ENST00000312196 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
MSL3-201ENST00000312196 SLC52A2Q9HAB3 445 aa11.37□□□□□ -0.59
MSL3-201ENST00000312196 GAS2L2Q8NHY3 880 aa11.37□□□□□ -0.59
MSL3-201ENST00000312196 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
MSL3-201ENST00000312196 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
MSL3-201ENST00000312196 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
MSL3-201ENST00000312196 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
MSL3-201ENST00000312196 RGL2O15211 777 aa11.36□□□□□ -0.59
MSL3-201ENST00000312196 GNPATO15228 680 aa11.36□□□□□ -0.59
MSL3-201ENST00000312196 HTATSF1O43719 755 aaKnown RBP11.36□□□□□ -0.59
MSL3-201ENST00000312196 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
MSL3-201ENST00000312196 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
MSL3-201ENST00000312196 APLP1P51693 650 aa11.35□□□□□ -0.59
MSL3-201ENST00000312196 CEMIPQ8WUJ3 1361 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 NRXN2Q9P2S2 1712 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 KIF3CO14782 793 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 TEX13AQ9BXU3 409 aaPredicted RBP11.34□□□□□ -0.59
MSL3-201ENST00000312196 NUDCQ9Y266 331 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 MMP10P09238 476 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
MSL3-201ENST00000312196 PARP3Q9Y6F1 533 aa11.34□□□□□ -0.59
MSL3-201ENST00000312196 BRCA1P38398 1863 aaKnown RBP11.33□□□□□ -0.6
MSL3-201ENST00000312196 MYH14Q7Z406 1995 aaKnown RBP11.33□□□□□ -0.6
MSL3-201ENST00000312196 GYS1P13807 737 aa11.33□□□□□ -0.6
MSL3-201ENST00000312196 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
MSL3-201ENST00000312196 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
MSL3-201ENST00000312196 FCHSD2O94868 740 aa11.32□□□□□ -0.6
MSL3-201ENST00000312196 FSTL1Q12841 308 aa11.32□□□□□ -0.6
MSL3-201ENST00000312196 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
MSL3-201ENST00000312196 SOS1Q07889 1333 aaPredicted RBP11.32□□□□□ -0.6
MSL3-201ENST00000312196 TOMM70O94826 608 aa11.32□□□□□ -0.6
MSL3-201ENST00000312196 INTS5Q6P9B9 1019 aaKnown RBP11.32□□□□□ -0.6
MSL3-201ENST00000312196 A0A087WZG4 1122 aa11.31□□□□□ -0.6
MSL3-201ENST00000312196 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
MSL3-201ENST00000312196 PPP2R1AP30153 589 aa11.31□□□□□ -0.6
MSL3-201ENST00000312196 RFC4P35249 363 aa11.31□□□□□ -0.6
MSL3-201ENST00000312196 CC2D1BQ5T0F9 858 aaKnown RBP11.31□□□□□ -0.6
MSL3-201ENST00000312196 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
MSL3-201ENST00000312196 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
MSL3-201ENST00000312196 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
MSL3-201ENST00000312196 TM4SF1P30408 202 aa11.31□□□□□ -0.6
MSL3-201ENST00000312196 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
MSL3-201ENST00000312196 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
MSL3-201ENST00000312196 PHF14O94880 888 aa11.3□□□□□ -0.6
MSL3-201ENST00000312196 PIM2Q9P1W9 311 aa11.3□□□□□ -0.6
MSL3-201ENST00000312196 SCN7AQ01118 1682 aa11.29□□□□□ -0.6
MSL3-201ENST00000312196 KCNA3P22001 575 aa11.29□□□□□ -0.6
MSL3-201ENST00000312196 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
MSL3-201ENST00000312196 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms