RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 THRAP3Q9Y2W1 955 aaKnown RBP28.86■■■□□ 2.21
IRF3-201ENST00000309877 CCDC9Q9Y3X0 531 aaKnown RBP28.86■■■□□ 2.21
IRF3-201ENST00000309877 SPATA31A1Q5TZJ5 1347 aa28.85■■■□□ 2.21
IRF3-201ENST00000309877 TCERG1O14776 1098 aaKnown RBP28.85■■■□□ 2.21
IRF3-201ENST00000309877 UNC5CLQ8IV45 518 aa28.85■■■□□ 2.21
IRF3-201ENST00000309877 SOS1Q07889 1333 aaPredicted RBP28.84■■■□□ 2.21
IRF3-201ENST00000309877 DISP2A7MBM2 1401 aa28.84■■■□□ 2.21
IRF3-201ENST00000309877 CDCA7Q9BWT1 371 aaPredicted RBP28.83■■■□□ 2.21
IRF3-201ENST00000309877 VIRMAQ69YN4 1812 aaKnown RBP28.83■■■□□ 2.21
IRF3-201ENST00000309877 EIF4A1P60842 406 aaKnown RBP28.83■■■□□ 2.21
IRF3-201ENST00000309877 NKX1-1Q15270 411 aaPredicted RBP28.83■■■□□ 2.21
IRF3-201ENST00000309877 NFATC2IPQ8NCF5 419 aa28.83■■■□□ 2.21
IRF3-201ENST00000309877 PANK1Q8TE04 598 aa28.83■■■□□ 2.21
IRF3-201ENST00000309877 SCN11AQ9UI33 1791 aa28.83■■■□□ 2.21
IRF3-201ENST00000309877 SPATA31A5Q5VU36 1347 aa28.82■■■□□ 2.2
IRF3-201ENST00000309877 SPATA31A7Q8IWB4 1347 aa28.82■■■□□ 2.2
IRF3-201ENST00000309877 CABP4P57796 275 aa28.82■■■□□ 2.2
IRF3-201ENST00000309877 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
IRF3-201ENST00000309877 ATF7IPQ6VMQ6 1270 aa28.82■■■□□ 2.2
IRF3-201ENST00000309877 KCNQ3O43525 872 aa28.81■■■□□ 2.2
IRF3-201ENST00000309877 FTSJ3Q8IY81 847 aaKnown RBP28.81■■■□□ 2.2
IRF3-201ENST00000309877 LRP6O75581 1613 aa28.81■■■□□ 2.2
IRF3-201ENST00000309877 EXOC5O00471 708 aa28.8■■■□□ 2.2
IRF3-201ENST00000309877 DZIP1LQ8IYY4 767 aaKnown RBP28.8■■■□□ 2.2
IRF3-201ENST00000309877 CLUAP1Q96AJ1 413 aa28.8■■■□□ 2.2
IRF3-201ENST00000309877 KDM3BQ7LBC6 1761 aa28.8■■■□□ 2.2
IRF3-201ENST00000309877 FNBP4Q8N3X1 1017 aaPredicted RBP28.8■■■□□ 2.2
IRF3-201ENST00000309877 TRIM27P14373 513 aa28.79■■■□□ 2.2
IRF3-201ENST00000309877 TNNQ9UQP3 1299 aa28.79■■■□□ 2.2
IRF3-201ENST00000309877 B4GALNT3Q6L9W6 998 aa28.78■■■□□ 2.2
IRF3-201ENST00000309877 SIPA1L3O60292 1781 aaPredicted RBP28.78■■■□□ 2.2
IRF3-201ENST00000309877 MRC1P22897 1456 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 ERVV-2B6SEH9 535 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 CCDC30Q5VVM6 783 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 ARHGAP45Q92619 1136 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 CCDC136Q96JN2 1154 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 COG6Q9Y2V7 657 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 STK31Q9BXU1 1019 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 CHMP4AQ9BY43 222 aa28.77■■■□□ 2.2
IRF3-201ENST00000309877 BCL9LQ86UU0 1499 aa28.76■■■□□ 2.19
IRF3-201ENST00000309877 HOXB7P09629 217 aa28.76■■■□□ 2.19
IRF3-201ENST00000309877 RLBP1P12271 317 aa28.76■■■□□ 2.19
IRF3-201ENST00000309877 VPS72Q15906 364 aa28.76■■■□□ 2.19
IRF3-201ENST00000309877 ZNF790Q6PG37 636 aa28.76■■■□□ 2.19
IRF3-201ENST00000309877 SHANK3Q9BYB0 1731 aa28.76■■■□□ 2.19
IRF3-201ENST00000309877 BARGINQ6ZT62 677 aa28.75■■■□□ 2.19
IRF3-201ENST00000309877 USP21Q9UK80 565 aa28.75■■■□□ 2.19
IRF3-201ENST00000309877 SLC4A2P04920 1241 aa28.74■■■□□ 2.19
IRF3-201ENST00000309877 SLC39A6Q13433 755 aa28.74■■■□□ 2.19
IRF3-201ENST00000309877 TTC5Q8N0Z6 440 aa28.74■■■□□ 2.19
IRF3-201ENST00000309877 HDGFL1Q5TGJ6 251 aa28.73■■■□□ 2.19
IRF3-201ENST00000309877 NECTIN2Q92692 538 aa28.73■■■□□ 2.19
IRF3-201ENST00000309877 DDB1Q16531 1140 aa28.72■■■□□ 2.19
IRF3-201ENST00000309877 API5Q9BZZ5 524 aaKnown RBP28.72■■■□□ 2.19
IRF3-201ENST00000309877 WNK3Q9BYP7 1800 aa28.72■■■□□ 2.19
IRF3-201ENST00000309877 TNS2Q63HR2 1409 aa28.71■■■□□ 2.19
IRF3-201ENST00000309877 MVPQ14764 893 aaKnown RBP28.7■■■□□ 2.19
IRF3-201ENST00000309877 EIF2S2P20042 333 aaKnown RBP28.7■■■□□ 2.18
IRF3-201ENST00000309877 GIGYF1O75420 1035 aaPredicted RBP28.69■■■□□ 2.18
IRF3-201ENST00000309877 HEG1Q9ULI3 1381 aa28.69■■■□□ 2.18
IRF3-201ENST00000309877 PTPRCP08575 1304 aa28.68■■■□□ 2.18
IRF3-201ENST00000309877 ITPRIPQ8IWB1 547 aa28.67■■■□□ 2.18
IRF3-201ENST00000309877 TMEM57Q8N5G2 664 aa28.67■■■□□ 2.18
IRF3-201ENST00000309877 TMOD3Q9NYL9 352 aa28.67■■■□□ 2.18
IRF3-201ENST00000309877 AAMPQ13685 434 aa28.66■■■□□ 2.18
IRF3-201ENST00000309877 FAM98CQ17RN3 349 aaKnown RBP28.66■■■□□ 2.18
IRF3-201ENST00000309877 AFF2P51816 1311 aa28.65■■■□□ 2.18
IRF3-201ENST00000309877 FMNL2Q96PY5 1086 aa28.65■■■□□ 2.18
IRF3-201ENST00000309877 ZNF496Q96IT1 587 aaPredicted RBP28.64■■■□□ 2.18
IRF3-201ENST00000309877 DDX19BQ9UMR2 479 aa28.64■■■□□ 2.18
IRF3-201ENST00000309877 G2E3Q7L622 706 aa28.63■■■□□ 2.17
IRF3-201ENST00000309877 ABCC4O15439 1325 aa28.62■■■□□ 2.17
IRF3-201ENST00000309877 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.62■■■□□ 2.17
IRF3-201ENST00000309877 SNRPA1P09661 255 aaKnown RBP28.61■■■□□ 2.17
IRF3-201ENST00000309877 PRAMEF22A3QJZ6 481 aa28.61■■■□□ 2.17
IRF3-201ENST00000309877 FLIIQ13045 1269 aa28.61■■■□□ 2.17
IRF3-201ENST00000309877 CHPF2Q9P2E5 772 aa28.61■■■□□ 2.17
IRF3-201ENST00000309877 DBF4Q9UBU7 674 aaPredicted RBP28.6■■■□□ 2.17
IRF3-201ENST00000309877 TOGARAM1Q9Y4F4 1720 aa28.59■■■□□ 2.17
IRF3-201ENST00000309877 A0A0G2JS52 829 aa28.59■■■□□ 2.17
IRF3-201ENST00000309877 MYT1Q01538 1121 aa28.59■■■□□ 2.17
IRF3-201ENST00000309877 MARCH10Q8NA82 808 aaPredicted RBP28.58■■■□□ 2.17
IRF3-201ENST00000309877 PIGBQ92521 554 aa28.58■■■□□ 2.17
IRF3-201ENST00000309877 FKBP5Q13451 457 aaPredicted RBP28.58■■■□□ 2.16
IRF3-201ENST00000309877 CHMP4BQ9H444 224 aaKnown RBP28.58■■■□□ 2.16
IRF3-201ENST00000309877 PELP1Q8IZL8 1130 aaKnown RBP28.57■■■□□ 2.16
IRF3-201ENST00000309877 GJD4Q96KN9 370 aaPredicted RBP28.57■■■□□ 2.16
IRF3-201ENST00000309877 TRPC5Q9UL62 973 aaPredicted RBP28.57■■■□□ 2.16
IRF3-201ENST00000309877 SYTL4Q96C24 671 aaPredicted RBP28.56■■■□□ 2.16
IRF3-201ENST00000309877 RGS12O14924 1447 aa28.56■■■□□ 2.16
IRF3-201ENST00000309877 PHAXQ9H814 394 aaKnown RBP28.54■■■□□ 2.16
IRF3-201ENST00000309877 PTCD1O75127 700 aaKnown RBP28.54■■■□□ 2.16
IRF3-201ENST00000309877 PRIM1P49642 420 aaKnown RBP28.54■■■□□ 2.16
IRF3-201ENST00000309877 INTS3Q68E01 1043 aaKnown RBP28.54■■■□□ 2.16
IRF3-201ENST00000309877 CACNA1FO60840 1977 aa28.53■■■□□ 2.16
IRF3-201ENST00000309877 BCL9O00512 1426 aa28.52■■■□□ 2.16
IRF3-201ENST00000309877 ATRNO75882 1429 aa28.52■■■□□ 2.16
IRF3-201ENST00000309877 DDX21Q9NR30 783 aaKnown RBP eCLIP28.52■■■□□ 2.16
IRF3-201ENST00000309877 HYPKQ9NX55 129 aa28.52■■■□□ 2.16
IRF3-201ENST00000309877 USP16Q9Y5T5 823 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms