RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CABP4P57796 275 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
PDE4D-201ENST00000309641 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
PDE4D-201ENST00000309641 BAG6P46379 1132 aa12.02□□□□□ -0.49
PDE4D-201ENST00000309641 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
PDE4D-201ENST00000309641 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.49
PDE4D-201ENST00000309641 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
PDE4D-201ENST00000309641 SRCAPQ6ZRS2 3230 aa12.01□□□□□ -0.49
PDE4D-201ENST00000309641 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
PDE4D-201ENST00000309641 ATG3Q9NT62 314 aa12.01□□□□□ -0.49
PDE4D-201ENST00000309641 PLSCR1O15162 318 aa12□□□□□ -0.49
PDE4D-201ENST00000309641 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
PDE4D-201ENST00000309641 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
PDE4D-201ENST00000309641 MRC1P22897 1456 aa12□□□□□ -0.49
PDE4D-201ENST00000309641 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
PDE4D-201ENST00000309641 TEFQ10587 303 aa11.99□□□□□ -0.49
PDE4D-201ENST00000309641 TXNRD1Q16881 649 aa11.99□□□□□ -0.49
PDE4D-201ENST00000309641 MIS18AQ9NYP9 233 aa11.99□□□□□ -0.49
PDE4D-201ENST00000309641 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
PDE4D-201ENST00000309641 KCNQ3O43525 872 aa11.98□□□□□ -0.49
PDE4D-201ENST00000309641 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
PDE4D-201ENST00000309641 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
PDE4D-201ENST00000309641 SIPA1L3O60292 1781 aaPredicted RBP11.98□□□□□ -0.49
PDE4D-201ENST00000309641 PTCD1O75127 700 aaKnown RBP11.98□□□□□ -0.49
PDE4D-201ENST00000309641 LY75O60449 1722 aa11.96□□□□□ -0.49
PDE4D-201ENST00000309641 RREB1Q92766 1687 aa11.96□□□□□ -0.5
PDE4D-201ENST00000309641 LOC102724428A0A0B4J2F2 783 aa11.96□□□□□ -0.5
PDE4D-201ENST00000309641 SIK1P57059 783 aa11.96□□□□□ -0.5
PDE4D-201ENST00000309641 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.5
PDE4D-201ENST00000309641 BTBD11A6QL63 1104 aa11.95□□□□□ -0.5
PDE4D-201ENST00000309641 ITPK1Q13572 414 aa11.95□□□□□ -0.5
PDE4D-201ENST00000309641 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
PDE4D-201ENST00000309641 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
PDE4D-201ENST00000309641 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
PDE4D-201ENST00000309641 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
PDE4D-201ENST00000309641 PAPPAQ13219 1627 aa11.95□□□□□ -0.5
PDE4D-201ENST00000309641 TAF7Q15545 349 aaPredicted RBP11.94□□□□□ -0.5
PDE4D-201ENST00000309641 ZNF790Q6PG37 636 aa11.94□□□□□ -0.5
PDE4D-201ENST00000309641 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
PDE4D-201ENST00000309641 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
PDE4D-201ENST00000309641 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
PDE4D-201ENST00000309641 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
PDE4D-201ENST00000309641 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
PDE4D-201ENST00000309641 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
PDE4D-201ENST00000309641 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
PDE4D-201ENST00000309641 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
PDE4D-201ENST00000309641 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
PDE4D-201ENST00000309641 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
PDE4D-201ENST00000309641 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
PDE4D-201ENST00000309641 ZNF827Q17R98 1081 aa11.92□□□□□ -0.5
PDE4D-201ENST00000309641 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
PDE4D-201ENST00000309641 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
PDE4D-201ENST00000309641 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
PDE4D-201ENST00000309641 TTC5Q8N0Z6 440 aa11.91□□□□□ -0.5
PDE4D-201ENST00000309641 TAF1LQ8IZX4 1826 aa11.91□□□□□ -0.5
PDE4D-201ENST00000309641 CCDC27Q2M243 656 aa11.91□□□□□ -0.5
PDE4D-201ENST00000309641 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
PDE4D-201ENST00000309641 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
PDE4D-201ENST00000309641 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
PDE4D-201ENST00000309641 CHL1O00533 1208 aa11.9□□□□□ -0.5
PDE4D-201ENST00000309641 R3HDM1Q15032 1099 aaKnown RBP11.9□□□□□ -0.5
PDE4D-201ENST00000309641 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
PDE4D-201ENST00000309641 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
PDE4D-201ENST00000309641 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
PDE4D-201ENST00000309641 KDM3BQ7LBC6 1761 aa11.9□□□□□ -0.5
PDE4D-201ENST00000309641 C5P01031 1676 aa11.9□□□□□ -0.51
PDE4D-201ENST00000309641 TJP1Q07157 1748 aa11.9□□□□□ -0.51
PDE4D-201ENST00000309641 EIF4A1P60842 406 aaKnown RBP11.89□□□□□ -0.51
PDE4D-201ENST00000309641 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
PDE4D-201ENST00000309641 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
PDE4D-201ENST00000309641 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
PDE4D-201ENST00000309641 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
PDE4D-201ENST00000309641 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
PDE4D-201ENST00000309641 SLC15A2Q16348 729 aa11.88□□□□□ -0.51
PDE4D-201ENST00000309641 MYH14Q7Z406 1995 aaKnown RBP11.88□□□□□ -0.51
PDE4D-201ENST00000309641 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
PDE4D-201ENST00000309641 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
PDE4D-201ENST00000309641 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
PDE4D-201ENST00000309641 USP16Q9Y5T5 823 aa11.88□□□□□ -0.51
PDE4D-201ENST00000309641 C4BP0C0L5 1744 aa11.88□□□□□ -0.51
PDE4D-201ENST00000309641 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
PDE4D-201ENST00000309641 CYP19A1P11511 503 aaPredicted RBP11.87□□□□□ -0.51
PDE4D-201ENST00000309641 CRKLP46109 303 aaKnown RBP11.87□□□□□ -0.51
PDE4D-201ENST00000309641 PIP4K2AP48426 406 aaPredicted RBP11.87□□□□□ -0.51
PDE4D-201ENST00000309641 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
PDE4D-201ENST00000309641 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
PDE4D-201ENST00000309641 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
PDE4D-201ENST00000309641 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
PDE4D-201ENST00000309641 NBPF14Q5TI25 921 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
PDE4D-201ENST00000309641 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 GNPATO15228 680 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 GNAI1P63096 354 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 HNRNPUQ00839 825 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDE4D-201ENST00000309641 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
PDE4D-201ENST00000309641 A1BGP04217 495 aa11.85□□□□□ -0.51
PDE4D-201ENST00000309641 SNRPA1P09661 255 aaKnown RBP11.85□□□□□ -0.51
PDE4D-201ENST00000309641 WDR63Q8IWG1 891 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms