RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 SLC52A2Q9HAB3 445 aa20.02■□□□□ 0.8
PIKFYVE-202ENST00000308862 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.8
PIKFYVE-202ENST00000308862 MIS18AQ9NYP9 233 aa20.02■□□□□ 0.8
PIKFYVE-202ENST00000308862 PAPPAQ13219 1627 aa20.02■□□□□ 0.8
PIKFYVE-202ENST00000308862 EXOSC9Q06265 439 aaKnown RBP20.02■□□□□ 0.79
PIKFYVE-202ENST00000308862 ITGB4P16144 1822 aa20.01■□□□□ 0.79
PIKFYVE-202ENST00000308862 CABP4P57796 275 aa20■□□□□ 0.79
PIKFYVE-202ENST00000308862 MARCH10Q8NA82 808 aaPredicted RBP20■□□□□ 0.79
PIKFYVE-202ENST00000308862 BTBD11A6QL63 1104 aa19.99■□□□□ 0.79
PIKFYVE-202ENST00000308862 ERVV-2B6SEH9 535 aa19.99■□□□□ 0.79
PIKFYVE-202ENST00000308862 ONECUT3O60422 494 aaPredicted RBP19.99■□□□□ 0.79
PIKFYVE-202ENST00000308862 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
PIKFYVE-202ENST00000308862 NFATC2IPQ8NCF5 419 aa19.98■□□□□ 0.79
PIKFYVE-202ENST00000308862 CT47B1P0C2W7 299 aaPredicted RBP19.97■□□□□ 0.79
PIKFYVE-202ENST00000308862 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
PIKFYVE-202ENST00000308862 SEPT12Q8IYM1 358 aa19.97■□□□□ 0.79
PIKFYVE-202ENST00000308862 BRWD3Q6RI45 1802 aa19.96■□□□□ 0.79
PIKFYVE-202ENST00000308862 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
PIKFYVE-202ENST00000308862 TMOD3Q9NYL9 352 aa19.95■□□□□ 0.78
PIKFYVE-202ENST00000308862 KRT24Q2M2I5 525 aa19.94■□□□□ 0.78
PIKFYVE-202ENST00000308862 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
PIKFYVE-202ENST00000308862 TSPYL6Q8N831 410 aa19.94■□□□□ 0.78
PIKFYVE-202ENST00000308862 C8orf58Q8NAV2 365 aa19.94■□□□□ 0.78
PIKFYVE-202ENST00000308862 RGS17Q9UGC6 210 aaPredicted RBP19.94■□□□□ 0.78
PIKFYVE-202ENST00000308862 BCL9O00512 1426 aa19.93■□□□□ 0.78
PIKFYVE-202ENST00000308862 NHSQ6T4R5 1651 aa19.93■□□□□ 0.78
PIKFYVE-202ENST00000308862 KCNQ3O43525 872 aa19.93■□□□□ 0.78
PIKFYVE-202ENST00000308862 C5P01031 1676 aa19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 ELL2O00472 640 aaPredicted RBP19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 SLC39A6Q13433 755 aa19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 SUPT16HQ9Y5B9 1047 aaKnown RBP19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 KCPQ6ZWJ8 1503 aa19.92■□□□□ 0.78
PIKFYVE-202ENST00000308862 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
PIKFYVE-202ENST00000308862 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
PIKFYVE-202ENST00000308862 RGS12O14924 1447 aa19.91■□□□□ 0.78
PIKFYVE-202ENST00000308862 RXRBP28702 533 aa19.91■□□□□ 0.78
PIKFYVE-202ENST00000308862 LAMB4A4D0S4 1761 aa19.9■□□□□ 0.78
PIKFYVE-202ENST00000308862 VAMP4O75379 141 aa19.9■□□□□ 0.78
PIKFYVE-202ENST00000308862 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
PIKFYVE-202ENST00000308862 RARSP54136 660 aaKnown RBP19.9■□□□□ 0.78
PIKFYVE-202ENST00000308862 PIGBQ92521 554 aa19.9■□□□□ 0.78
PIKFYVE-202ENST00000308862 ACSBG1Q96GR2 724 aa19.9■□□□□ 0.78
PIKFYVE-202ENST00000308862 POTEAQ6S8J7 498 aa19.89■□□□□ 0.77
PIKFYVE-202ENST00000308862 ZNF428Q96B54 188 aa19.89■□□□□ 0.77
PIKFYVE-202ENST00000308862 SOS1Q07889 1333 aaPredicted RBP19.89■□□□□ 0.77
PIKFYVE-202ENST00000308862 HEG1Q9ULI3 1381 aa19.88■□□□□ 0.77
PIKFYVE-202ENST00000308862 SBF2Q86WG5 1849 aa19.88■□□□□ 0.77
PIKFYVE-202ENST00000308862 FAM182BQ5T319 152 aa19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 BCL2L13Q9BXK5 485 aa19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 BCAR3O75815 825 aa19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 KRT27Q7Z3Y8 459 aa19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 ZNF496Q96IT1 587 aaPredicted RBP19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 SMC4Q9NTJ3 1288 aa19.87■□□□□ 0.77
PIKFYVE-202ENST00000308862 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
PIKFYVE-202ENST00000308862 HOXB7P09629 217 aa19.86■□□□□ 0.77
PIKFYVE-202ENST00000308862 RRP1P56182 461 aaKnown RBP19.86■□□□□ 0.77
PIKFYVE-202ENST00000308862 ALDH1L2Q3SY69 923 aa19.86■□□□□ 0.77
PIKFYVE-202ENST00000308862 SSH1Q8WYL5 1049 aa19.86■□□□□ 0.77
PIKFYVE-202ENST00000308862 BTAF1O14981 1849 aa19.85■□□□□ 0.77
PIKFYVE-202ENST00000308862 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
PIKFYVE-202ENST00000308862 ASAP1Q9ULH1 1129 aa19.85■□□□□ 0.77
PIKFYVE-202ENST00000308862 KCNQ2O43526 872 aa19.84■□□□□ 0.77
PIKFYVE-202ENST00000308862 GIGYF1O75420 1035 aaPredicted RBP19.84■□□□□ 0.77
PIKFYVE-202ENST00000308862 ATG3Q9NT62 314 aa19.84■□□□□ 0.77
PIKFYVE-202ENST00000308862 HDGFL1Q5TGJ6 251 aa19.83■□□□□ 0.76
PIKFYVE-202ENST00000308862 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
PIKFYVE-202ENST00000308862 PTCD1O75127 700 aaKnown RBP19.82■□□□□ 0.76
PIKFYVE-202ENST00000308862 PRAMEF22A3QJZ6 481 aa19.81■□□□□ 0.76
PIKFYVE-202ENST00000308862 CCDC30Q5VVM6 783 aa19.81■□□□□ 0.76
PIKFYVE-202ENST00000308862 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.81■□□□□ 0.76
PIKFYVE-202ENST00000308862 KIF16BQ96L93 1317 aa19.81■□□□□ 0.76
PIKFYVE-202ENST00000308862 CICQ96RK0 1608 aaPredicted RBP19.81■□□□□ 0.76
PIKFYVE-202ENST00000308862 TJP1Q07157 1748 aa19.81■□□□□ 0.76
PIKFYVE-202ENST00000308862 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 NECTIN2Q92692 538 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 PALLDQ8WX93 1383 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 PLIN1O60240 522 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 NEFLP07196 543 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 EIF2S2P20042 333 aaKnown RBP19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 MRPL50Q8N5N7 158 aaKnown RBP19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 CHMP4AQ9BY43 222 aa19.8■□□□□ 0.76
PIKFYVE-202ENST00000308862 FRAT1Q92837 279 aaPredicted RBP19.79■□□□□ 0.76
PIKFYVE-202ENST00000308862 BRPF1P55201 1214 aaPredicted RBP19.78■□□□□ 0.76
PIKFYVE-202ENST00000308862 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
PIKFYVE-202ENST00000308862 ZNF831Q5JPB2 1677 aa19.77■□□□□ 0.76
PIKFYVE-202ENST00000308862 CACNA1FO60840 1977 aa19.77■□□□□ 0.76
PIKFYVE-202ENST00000308862 PTF1AQ7RTS3 328 aa19.77■□□□□ 0.76
PIKFYVE-202ENST00000308862 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.76
PIKFYVE-202ENST00000308862 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
PIKFYVE-202ENST00000308862 IRX6P78412 446 aaPredicted RBP19.76■□□□□ 0.75
PIKFYVE-202ENST00000308862 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
PIKFYVE-202ENST00000308862 LY75O60449 1722 aa19.75■□□□□ 0.75
PIKFYVE-202ENST00000308862 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
PIKFYVE-202ENST00000308862 NOB1Q9ULX3 412 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms