RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 AK7Q96M32 723 aa39.23■■■■□ 3.87
H2AFV-202ENST00000308153 UBR3Q6ZT12 1888 aa39.23■■■■□ 3.87
H2AFV-202ENST00000308153 ITPK1Q13572 414 aa39.22■■■■□ 3.87
H2AFV-202ENST00000308153 MSL1Q68DK7 614 aa39.2■■■■□ 3.87
H2AFV-202ENST00000308153 ATP6V1AP38606 617 aa39.17■■■■□ 3.86
H2AFV-202ENST00000308153 SMIM5Q71RC9 77 aa39.17■■■■□ 3.86
H2AFV-202ENST00000308153 KLHL34Q8N239 644 aa39.17■■■■□ 3.86
H2AFV-202ENST00000308153 C1orf141Q5JVX7 400 aa39.16■■■■□ 3.86
H2AFV-202ENST00000308153 SLC4A9Q96Q91 983 aa39.15■■■■□ 3.86
H2AFV-202ENST00000308153 ZNF831Q5JPB2 1677 aa39.14■■■■□ 3.86
H2AFV-202ENST00000308153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP39.14■■■■□ 3.86
H2AFV-202ENST00000308153 PHF14O94880 888 aa39.13■■■■□ 3.85
H2AFV-202ENST00000308153 SSFA2P28290 1259 aa39.13■■■■□ 3.85
H2AFV-202ENST00000308153 CABP4P57796 275 aa39.12■■■■□ 3.85
H2AFV-202ENST00000308153 NLGN2Q8NFZ4 835 aa39.11■■■■□ 3.85
H2AFV-202ENST00000308153 GOLGB1Q14789 3259 aaKnown RBP39.11■■■■□ 3.85
H2AFV-202ENST00000308153 COL3A1P02461 1466 aaPredicted RBP39.11■■■■□ 3.85
H2AFV-202ENST00000308153 HMOX1P09601 288 aa39.1■■■■□ 3.85
H2AFV-202ENST00000308153 DIAPH1O60610 1272 aaKnown RBP39.09■■■■□ 3.85
H2AFV-202ENST00000308153 GNPATO15228 680 aa39.07■■■■□ 3.85
H2AFV-202ENST00000308153 CNGB1Q14028 1251 aaPredicted RBP39.07■■■■□ 3.85
H2AFV-202ENST00000308153 RBM42Q9BTD8 480 aaKnown RBP39.07■■■■□ 3.85
H2AFV-202ENST00000308153 SCN11AQ9UI33 1791 aa39.07■■■■□ 3.84
H2AFV-202ENST00000308153 AKAP4Q5JQC9 854 aa39.06■■■■□ 3.84
H2AFV-202ENST00000308153 NFATC2IPQ8NCF5 419 aa39.06■■■■□ 3.84
H2AFV-202ENST00000308153 COL5A3P25940 1745 aaPredicted RBP39.05■■■■□ 3.84
H2AFV-202ENST00000308153 GPR162Q16538 588 aa39.01■■■■□ 3.84
H2AFV-202ENST00000308153 CNTNAP4Q9C0A0 1308 aa38.98■■■■□ 3.83
H2AFV-202ENST00000308153 MTHFSDQ2M296 383 aaKnown RBP38.98■■■■□ 3.83
H2AFV-202ENST00000308153 RC3H1Q5TC82 1133 aaKnown RBP38.98■■■■□ 3.83
H2AFV-202ENST00000308153 LGR6Q9HBX8 967 aa38.98■■■■□ 3.83
H2AFV-202ENST00000308153 MRC1P22897 1456 aa38.98■■■■□ 3.83
H2AFV-202ENST00000308153 PTCD1O75127 700 aaKnown RBP38.97■■■■□ 3.83
H2AFV-202ENST00000308153 CD2APQ9Y5K6 639 aa38.97■■■■□ 3.83
H2AFV-202ENST00000308153 CHD4Q14839 1912 aa38.97■■■■□ 3.83
H2AFV-202ENST00000308153 SLC52A2Q9HAB3 445 aa38.96■■■■□ 3.83
H2AFV-202ENST00000308153 RTCBQ9Y3I0 505 aaKnown RBP38.96■■■■□ 3.83
H2AFV-202ENST00000308153 ADAMTS7Q9UKP4 1686 aa38.96■■■■□ 3.83
H2AFV-202ENST00000308153 CICQ96RK0 1608 aaPredicted RBP38.95■■■■□ 3.83
H2AFV-202ENST00000308153 RNMTO43148 476 aaKnown RBP38.94■■■■□ 3.82
H2AFV-202ENST00000308153 MYH14Q7Z406 1995 aaKnown RBP38.93■■■■□ 3.82
H2AFV-202ENST00000308153 TJP1Q07157 1748 aa38.92■■■■□ 3.82
H2AFV-202ENST00000308153 VIRMAQ69YN4 1812 aaKnown RBP38.92■■■■□ 3.82
H2AFV-202ENST00000308153 PELP1Q8IZL8 1130 aaKnown RBP38.92■■■■□ 3.82
H2AFV-202ENST00000308153 TRAPPC3LQ5T215 181 aa38.91■■■■□ 3.82
H2AFV-202ENST00000308153 U2SURPO15042 1029 aaKnown RBP38.9■■■■□ 3.82
H2AFV-202ENST00000308153 RPS6KA4O75676 772 aa38.9■■■■□ 3.82
H2AFV-202ENST00000308153 YBX3P16989 372 aaKnown RBP eCLIP38.89■■■■□ 3.82
H2AFV-202ENST00000308153 ADRA2BP18089 450 aa38.89■■■■□ 3.82
H2AFV-202ENST00000308153 ARHGEF1Q92888 912 aaKnown RBP38.89■■■■□ 3.82
H2AFV-202ENST00000308153 CRKLP46109 303 aaKnown RBP38.86■■■■□ 3.81
H2AFV-202ENST00000308153 ZNF784Q8NCA9 323 aaPredicted RBP38.85■■■■□ 3.81
H2AFV-202ENST00000308153 C4AP0C0L4 1744 aa38.84■■■■□ 3.81
H2AFV-202ENST00000308153 MMP10P09238 476 aa38.83■■■■□ 3.81
H2AFV-202ENST00000308153 SLC39A6Q13433 755 aa38.83■■■■□ 3.81
H2AFV-202ENST00000308153 KCPQ6ZWJ8 1503 aa38.83■■■■□ 3.81
H2AFV-202ENST00000308153 PPP2R1AP30153 589 aa38.81■■■■□ 3.8
H2AFV-202ENST00000308153 GYS1P13807 737 aa38.8■■■■□ 3.8
H2AFV-202ENST00000308153 NLGN1Q8N2Q7 840 aa38.8■■■■□ 3.8
H2AFV-202ENST00000308153 CFAP53Q96M91 514 aa38.8■■■■□ 3.8
H2AFV-202ENST00000308153 GRIN3BO60391 1043 aa38.79■■■■□ 3.8
H2AFV-202ENST00000308153 RFC4P35249 363 aa38.79■■■■□ 3.8
H2AFV-202ENST00000308153 INTS5Q6P9B9 1019 aaKnown RBP38.78■■■■□ 3.8
H2AFV-202ENST00000308153 DNAJC10Q8IXB1 793 aa38.78■■■■□ 3.8
H2AFV-202ENST00000308153 GAS2L2Q8NHY3 880 aa38.78■■■■□ 3.8
H2AFV-202ENST00000308153 RSPH6AQ9H0K4 717 aa38.76■■■■□ 3.8
H2AFV-202ENST00000308153 GNAT3A8MTJ3 354 aa38.74■■■■□ 3.79
H2AFV-202ENST00000308153 IL17REQ8NFR9 667 aa38.74■■■■□ 3.79
H2AFV-202ENST00000308153 UBR2Q8IWV8 1755 aa38.74■■■■□ 3.79
H2AFV-202ENST00000308153 KIF13BQ9NQT8 1826 aa38.73■■■■□ 3.79
H2AFV-202ENST00000308153 PHACTR3Q96KR7 559 aa38.73■■■■□ 3.79
H2AFV-202ENST00000308153 PRKAR2BP31323 418 aa38.72■■■■□ 3.79
H2AFV-202ENST00000308153 USP42Q9H9J4 1324 aaKnown RBP38.71■■■■□ 3.79
H2AFV-202ENST00000308153 CYP19A1P11511 503 aaPredicted RBP38.71■■■■□ 3.79
H2AFV-202ENST00000308153 CCDC87Q9NVE4 849 aa38.71■■■■□ 3.79
H2AFV-202ENST00000308153 SRP68Q9UHB9 627 aaKnown RBP38.71■■■■□ 3.79
H2AFV-202ENST00000308153 NUDCQ9Y266 331 aa38.7■■■■□ 3.79
H2AFV-202ENST00000308153 C10orf71Q711Q0 1435 aa38.7■■■■□ 3.79
H2AFV-202ENST00000308153 KIAA1551Q9HCM1 1747 aa38.69■■■■□ 3.78
H2AFV-202ENST00000308153 SIPA1L3O60292 1781 aaPredicted RBP38.69■■■■□ 3.78
H2AFV-202ENST00000308153 VSIG10Q8N0Z9 540 aa38.68■■■■□ 3.78
H2AFV-202ENST00000308153 PXDNLA1KZ92 1463 aa38.67■■■■□ 3.78
H2AFV-202ENST00000308153 SOS1Q07889 1333 aaPredicted RBP38.67■■■■□ 3.78
H2AFV-202ENST00000308153 CEMIPQ8WUJ3 1361 aa38.67■■■■□ 3.78
H2AFV-202ENST00000308153 WWC3Q9ULE0 1092 aa38.66■■■■□ 3.78
H2AFV-202ENST00000308153 U2AF1L5P0DN76 240 aaPredicted RBP38.65■■■■□ 3.78
H2AFV-202ENST00000308153 U2AF1Q01081 240 aaKnown RBP eCLIP38.65■■■■□ 3.788e-7■□□□□ 8.6
H2AFV-202ENST00000308153 TEFQ10587 303 aa38.65■■■■□ 3.78
H2AFV-202ENST00000308153 FKBP8Q14318 412 aa38.65■■■■□ 3.78
H2AFV-202ENST00000308153 ZBTB1Q9Y2K1 713 aa38.63■■■■□ 3.77
H2AFV-202ENST00000308153 PARP3Q9Y6F1 533 aa38.63■■■■□ 3.77
H2AFV-202ENST00000308153 TTC5Q8N0Z6 440 aa38.62■■■■□ 3.77
H2AFV-202ENST00000308153 ZNF790Q6PG37 636 aa38.61■■■■□ 3.77
H2AFV-202ENST00000308153 FCHSD2O94868 740 aa38.6■■■■□ 3.77
H2AFV-202ENST00000308153 TGFB2P61812 414 aa38.6■■■■□ 3.77
H2AFV-202ENST00000308153 ZNF496Q96IT1 587 aaPredicted RBP38.6■■■■□ 3.77
H2AFV-202ENST00000308153 N4BP2Q86UW6 1770 aaPredicted RBP38.59■■■■□ 3.77
H2AFV-202ENST00000308153 DDR1Q08345 913 aa38.59■■■■□ 3.77
H2AFV-202ENST00000308153 COL15A1P39059 1388 aa38.58■■■■□ 3.77
H2AFV-202ENST00000308153 HEG1Q9ULI3 1381 aa38.57■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms