RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 SETBP1Q9Y6X0 1596 aa21.9■■□□□ 1.1
CNNM3-201ENST00000305510 IBTKQ9P2D0 1353 aaPredicted RBP21.9■■□□□ 1.1
CNNM3-201ENST00000305510 KIF2CQ99661 725 aa21.9■■□□□ 1.1
CNNM3-201ENST00000305510 PTPRMP28827 1452 aa21.89■■□□□ 1.09
CNNM3-201ENST00000305510 DDX54Q8TDD1 881 aaKnown RBP21.89■■□□□ 1.09
CNNM3-201ENST00000305510 AMOTL2Q9Y2J4 779 aa21.89■■□□□ 1.09
CNNM3-201ENST00000305510 MSH6P52701 1360 aa21.89■■□□□ 1.09
CNNM3-201ENST00000305510 C17orf53Q8N3J3 647 aaPredicted RBP21.88■■□□□ 1.09
CNNM3-201ENST00000305510 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.88■■□□□ 1.09
CNNM3-201ENST00000305510 LTKP29376 864 aa21.88■■□□□ 1.09
CNNM3-201ENST00000305510 ANKRD44Q8N8A2 993 aa21.88■■□□□ 1.09
CNNM3-201ENST00000305510 HAP1P54257 671 aaPredicted RBP21.87■■□□□ 1.09
CNNM3-201ENST00000305510 LMBRD1Q9NUN5 540 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 LMTK2Q8IWU2 1503 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 ABCC4O15439 1325 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 CD163L1Q9NR16 1453 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 IPO4Q8TEX9 1081 aaKnown RBP21.87■■□□□ 1.09
CNNM3-201ENST00000305510 KIF3AQ9Y496 699 aa21.87■■□□□ 1.09
CNNM3-201ENST00000305510 LRRC7Q96NW7 1537 aa21.86■■□□□ 1.09
CNNM3-201ENST00000305510 PDCL2Q8N4E4 241 aa21.86■■□□□ 1.09
CNNM3-201ENST00000305510 GDPD2Q9HCC8 539 aa21.86■■□□□ 1.09
CNNM3-201ENST00000305510 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
CNNM3-201ENST00000305510 RPAP2Q8IXW5 612 aaPredicted RBP21.86■■□□□ 1.09
CNNM3-201ENST00000305510 PNPLA6Q8IY17 1366 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 SURF6O75683 361 aaKnown RBP21.85■■□□□ 1.09
CNNM3-201ENST00000305510 RABEP1Q15276 862 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 EYA1Q99502 592 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 LRRFIP2Q9Y608 721 aaKnown RBP21.85■■□□□ 1.09
CNNM3-201ENST00000305510 FAM135BQ49AJ0 1406 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 PPLO60437 1756 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 REC8O95072 547 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 GNAI2P04899 355 aa21.85■■□□□ 1.09
CNNM3-201ENST00000305510 CCDC9Q9Y3X0 531 aaKnown RBP21.85■■□□□ 1.09
CNNM3-201ENST00000305510 U2AF2P26368 475 aaKnown RBP eCLIP21.84■■□□□ 1.098e-18■■■□□ 15.4
CNNM3-201ENST00000305510 CHL1O00533 1208 aa21.84■■□□□ 1.09
CNNM3-201ENST00000305510 HMGN5P82970 282 aaKnown RBP21.84■■□□□ 1.09
CNNM3-201ENST00000305510 USP26Q9BXU7 913 aa21.83■■□□□ 1.09
CNNM3-201ENST00000305510 ZFYVE9O95405 1425 aa21.83■■□□□ 1.08
CNNM3-201ENST00000305510 PNMA6EA0A0J9YXQ4 647 aa21.83■■□□□ 1.08
CNNM3-201ENST00000305510 FLIIQ13045 1269 aa21.82■■□□□ 1.08
CNNM3-201ENST00000305510 GPT2Q8TD30 523 aa21.82■■□□□ 1.08
CNNM3-201ENST00000305510 ERC2O15083 957 aa21.82■■□□□ 1.08
CNNM3-201ENST00000305510 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
CNNM3-201ENST00000305510 LRSAM1Q6UWE0 723 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 TMEM63CQ9P1W3 806 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 PIK3C2BO00750 1634 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 PRIMPOLQ96LW4 560 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 PHAXQ9H814 394 aaKnown RBP21.81■■□□□ 1.08
CNNM3-201ENST00000305510 BCL2L12Q9HB09 334 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 TSPOAP1O95153 1857 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 SIGLEC1Q9BZZ2 1709 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 NUCB2P80303 420 aa21.81■■□□□ 1.08
CNNM3-201ENST00000305510 AIMP1Q12904 312 aaKnown RBP21.8■■□□□ 1.08
CNNM3-201ENST00000305510 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
CNNM3-201ENST00000305510 PDE1AP54750 535 aa21.8■■□□□ 1.08
CNNM3-201ENST00000305510 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
CNNM3-201ENST00000305510 LRRCC1Q9C099 1032 aa21.8■■□□□ 1.08
CNNM3-201ENST00000305510 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
CNNM3-201ENST00000305510 PAXIP1Q6ZW49 1069 aaPredicted RBP21.8■■□□□ 1.08
CNNM3-201ENST00000305510 TAOK2Q9UL54 1235 aa21.8■■□□□ 1.08
CNNM3-201ENST00000305510 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
CNNM3-201ENST00000305510 ROBO2Q9HCK4 1378 aa21.79■■□□□ 1.08
CNNM3-201ENST00000305510 ARHGEF40Q8TER5 1519 aa21.79■■□□□ 1.08
CNNM3-201ENST00000305510 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
CNNM3-201ENST00000305510 TTC12Q9H892 705 aaPredicted RBP21.79■■□□□ 1.08
CNNM3-201ENST00000305510 COL3A1P02461 1466 aaPredicted RBP21.79■■□□□ 1.08
CNNM3-201ENST00000305510 NSFL1CQ9UNZ2 370 aaKnown RBP21.78■■□□□ 1.08
CNNM3-201ENST00000305510 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
CNNM3-201ENST00000305510 NEO1Q92859 1461 aa21.78■■□□□ 1.08
CNNM3-201ENST00000305510 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
CNNM3-201ENST00000305510 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
CNNM3-201ENST00000305510 ARHGEF28Q8N1W1 1705 aaKnown RBP21.77■■□□□ 1.08
CNNM3-201ENST00000305510 MCCP23508 829 aa21.77■■□□□ 1.08
CNNM3-201ENST00000305510 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
CNNM3-201ENST00000305510 KCNJ4P48050 445 aa21.77■■□□□ 1.07
CNNM3-201ENST00000305510 CLEC17AQ6ZS10 378 aa21.77■■□□□ 1.07
CNNM3-201ENST00000305510 DIP2CQ9Y2E4 1556 aa21.76■■□□□ 1.07
CNNM3-201ENST00000305510 MX1P20591 662 aa21.76■■□□□ 1.07
CNNM3-201ENST00000305510 SRGAP3O43295 1099 aa21.76■■□□□ 1.07
CNNM3-201ENST00000305510 TAF7LQ5H9L4 462 aa21.76■■□□□ 1.07
CNNM3-201ENST00000305510 TAF3Q5VWG9 929 aa21.75■■□□□ 1.07
CNNM3-201ENST00000305510 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
CNNM3-201ENST00000305510 CCT4P50991 539 aaKnown RBP21.75■■□□□ 1.07
CNNM3-201ENST00000305510 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
CNNM3-201ENST00000305510 PALD1Q9ULE6 856 aa21.75■■□□□ 1.07
CNNM3-201ENST00000305510 RTL1A6NKG5 1358 aa21.75■■□□□ 1.07
CNNM3-201ENST00000305510 AK9Q5TCS8 1911 aa21.74■■□□□ 1.07
CNNM3-201ENST00000305510 TEFQ10587 303 aa21.74■■□□□ 1.07
CNNM3-201ENST00000305510 UNC5CLQ8IV45 518 aa21.74■■□□□ 1.07
CNNM3-201ENST00000305510 CPS1P31327 1500 aa21.74■■□□□ 1.07
CNNM3-201ENST00000305510 CWC27Q6UX04 472 aaKnown RBP21.74■■□□□ 1.07
CNNM3-201ENST00000305510 MYO3AQ8NEV4 1616 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 ARHGAP31Q2M1Z3 1444 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 CHMP4AQ9BY43 222 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 IFT172Q9UG01 1749 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 CPA1P15085 419 aa21.73■■□□□ 1.07
CNNM3-201ENST00000305510 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms