RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 BACH2Q9BYV9 841 aa28.2■■■□□ 2.1
SMAD1-201ENST00000302085 ADAMTS7Q9UKP4 1686 aa28.2■■■□□ 2.1
SMAD1-201ENST00000302085 PHKG2P15735 406 aa28.19■■■□□ 2.1
SMAD1-201ENST00000302085 PDZRN3Q9UPQ7 1066 aa28.19■■■□□ 2.1
SMAD1-201ENST00000302085 PLEKHG2Q9H7P9 1386 aa28.18■■■□□ 2.1
SMAD1-201ENST00000302085 COL5A2P05997 1499 aaPredicted RBP28.16■■■□□ 2.1
SMAD1-201ENST00000302085 C1orf115Q9H7X2 142 aa28.16■■■□□ 2.1
SMAD1-201ENST00000302085 TOM1L2Q6ZVM7 507 aa28.15■■■□□ 2.1
SMAD1-201ENST00000302085 IFNL2Q8IZJ0 200 aa28.15■■■□□ 2.1
SMAD1-201ENST00000302085 ROBO1Q9Y6N7 1651 aa28.15■■■□□ 2.1
SMAD1-201ENST00000302085 KDM6AO15550 1401 aaPredicted RBP28.15■■■□□ 2.1
SMAD1-201ENST00000302085 HOXB7P09629 217 aa28.15■■■□□ 2.1
SMAD1-201ENST00000302085 HDGFL1Q5TGJ6 251 aa28.15■■■□□ 2.1
SMAD1-201ENST00000302085 SIPA1L3O60292 1781 aaPredicted RBP28.14■■■□□ 2.1
SMAD1-201ENST00000302085 CYP27B1O15528 508 aa28.14■■■□□ 2.1
SMAD1-201ENST00000302085 FLIIQ13045 1269 aa28.13■■■□□ 2.09
SMAD1-201ENST00000302085 SMC5Q8IY18 1101 aa28.13■■■□□ 2.09
SMAD1-201ENST00000302085 F6X3S4 739 aa28.13■■■□□ 2.09
SMAD1-201ENST00000302085 PKD1L3Q7Z443 1732 aa28.11■■■□□ 2.09
SMAD1-201ENST00000302085 CACNA1FO60840 1977 aa28.11■■■□□ 2.09
SMAD1-201ENST00000302085 EIF2S2P20042 333 aaKnown RBP28.11■■■□□ 2.09
SMAD1-201ENST00000302085 CARD10Q9BWT7 1032 aa28.11■■■□□ 2.09
SMAD1-201ENST00000302085 SLC52A2Q9HAB3 445 aa28.11■■■□□ 2.09
SMAD1-201ENST00000302085 SCN11AQ9UI33 1791 aa28.11■■■□□ 2.09
SMAD1-201ENST00000302085 HEG1Q9ULI3 1381 aa28.11■■■□□ 2.09
SMAD1-201ENST00000302085 SIRT2Q8IXJ6 389 aa28.1■■■□□ 2.09
SMAD1-201ENST00000302085 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
SMAD1-201ENST00000302085 LARP1Q6PKG0 1096 aaKnown RBP28.1■■■□□ 2.09
SMAD1-201ENST00000302085 EVA1CP58658 441 aa28.09■■■□□ 2.09
SMAD1-201ENST00000302085 DCAF5Q96JK2 942 aa28.09■■■□□ 2.09
SMAD1-201ENST00000302085 STRN4Q9NRL3 753 aa28.09■■■□□ 2.09
SMAD1-201ENST00000302085 FKBP5Q13451 457 aaPredicted RBP28.08■■■□□ 2.09
SMAD1-201ENST00000302085 SLC4A10Q6U841 1118 aa28.08■■■□□ 2.09
SMAD1-201ENST00000302085 GIGYF1O75420 1035 aaPredicted RBP28.08■■■□□ 2.09
SMAD1-201ENST00000302085 CCT4P50991 539 aaKnown RBP28.08■■■□□ 2.09
SMAD1-201ENST00000302085 NFATC2IPQ8NCF5 419 aa28.07■■■□□ 2.08
SMAD1-201ENST00000302085 CHMP4AQ9BY43 222 aa28.07■■■□□ 2.08
SMAD1-201ENST00000302085 PHAXQ9H814 394 aaKnown RBP28.07■■■□□ 2.08
SMAD1-201ENST00000302085 FAM161AQ3B820 660 aa28.06■■■□□ 2.08
SMAD1-201ENST00000302085 C8orf34Q49A92 452 aa28.06■■■□□ 2.08
SMAD1-201ENST00000302085 HSP90AB1P08238 724 aaKnown RBP28.05■■■□□ 2.08
SMAD1-201ENST00000302085 ZCRB1Q8TBF4 217 aaKnown RBP28.05■■■□□ 2.08
SMAD1-201ENST00000302085 MEIS3Q99687 375 aa28.05■■■□□ 2.08
SMAD1-201ENST00000302085 CHPF2Q9P2E5 772 aa28.05■■■□□ 2.08
SMAD1-201ENST00000302085 SLC39A6Q13433 755 aa28.04■■■□□ 2.08
SMAD1-201ENST00000302085 IL2RBP14784 551 aa28.03■■■□□ 2.08
SMAD1-201ENST00000302085 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
SMAD1-201ENST00000302085 PARP4Q9UKK3 1724 aaKnown RBP28.03■■■□□ 2.08
SMAD1-201ENST00000302085 PRAMEF22A3QJZ6 481 aa28.02■■■□□ 2.08
SMAD1-201ENST00000302085 NUCB1Q02818 461 aa28.02■■■□□ 2.08
SMAD1-201ENST00000302085 BTG4Q9NY30 223 aa28.01■■■□□ 2.07
SMAD1-201ENST00000302085 MRC1P22897 1456 aa28.01■■■□□ 2.07
SMAD1-201ENST00000302085 GCC1Q96CN9 775 aa28■■■□□ 2.07
SMAD1-201ENST00000302085 COL22A1Q8NFW1 1626 aaPredicted RBP28■■■□□ 2.07
SMAD1-201ENST00000302085 ANKRD44Q8N8A2 993 aa28■■■□□ 2.07
SMAD1-201ENST00000302085 PCDH11XQ9BZA7 1347 aa28■■■□□ 2.07
SMAD1-201ENST00000302085 PCDH11YQ9BZA8 1340 aa28■■■□□ 2.07
SMAD1-201ENST00000302085 ANXA1P04083 346 aa27.99■■■□□ 2.07
SMAD1-201ENST00000302085 RPAP2Q8IXW5 612 aaPredicted RBP27.99■■■□□ 2.07
SMAD1-201ENST00000302085 ATP10DQ9P241 1426 aa27.99■■■□□ 2.07
SMAD1-201ENST00000302085 DBF4Q9UBU7 674 aaPredicted RBP27.99■■■□□ 2.07
SMAD1-201ENST00000302085 CABP4P57796 275 aa27.97■■■□□ 2.07
SMAD1-201ENST00000302085 CEP85Q6P2H3 762 aa27.97■■■□□ 2.07
SMAD1-201ENST00000302085 NKX1-1Q15270 411 aaPredicted RBP27.96■■■□□ 2.07
SMAD1-201ENST00000302085 CHD1LQ86WJ1 897 aa27.96■■■□□ 2.07
SMAD1-201ENST00000302085 COL14A1Q05707 1796 aaKnown RBP27.95■■■□□ 2.07
SMAD1-201ENST00000302085 PXDNLA1KZ92 1463 aa27.95■■■□□ 2.07
SMAD1-201ENST00000302085 PROSER3Q2NL68 480 aa27.95■■■□□ 2.06
SMAD1-201ENST00000302085 ZNF496Q96IT1 587 aaPredicted RBP27.95■■■□□ 2.06
SMAD1-201ENST00000302085 ANKRD45Q5TZF3 282 aa27.94■■■□□ 2.06
SMAD1-201ENST00000302085 DCTPP1Q9H773 170 aa27.94■■■□□ 2.06
SMAD1-201ENST00000302085 USP35Q9P2H5 1018 aa27.94■■■□□ 2.06
SMAD1-201ENST00000302085 LNPKQ9C0E8 428 aa27.93■■■□□ 2.06
SMAD1-201ENST00000302085 DDX54Q8TDD1 881 aaKnown RBP27.93■■■□□ 2.06
SMAD1-201ENST00000302085 COL16A1Q07092 1604 aaPredicted RBP27.92■■■□□ 2.06
SMAD1-201ENST00000302085 PHLPP1O60346 1717 aa27.92■■■□□ 2.06
SMAD1-201ENST00000302085 PI4KAP2A4QPH2 592 aa27.91■■■□□ 2.06
SMAD1-201ENST00000302085 TOM1O60784 492 aa27.91■■■□□ 2.06
SMAD1-201ENST00000302085 PDIA6Q15084 440 aa27.91■■■□□ 2.06
SMAD1-201ENST00000302085 PI4KAP1Q8N8J0 262 aa27.91■■■□□ 2.06
SMAD1-201ENST00000302085 N4BP2Q86UW6 1770 aaPredicted RBP27.91■■■□□ 2.06
SMAD1-201ENST00000302085 ERVV-2B6SEH9 535 aa27.91■■■□□ 2.06
SMAD1-201ENST00000302085 TTC5Q8N0Z6 440 aa27.91■■■□□ 2.06
SMAD1-201ENST00000302085 SHANK3Q9BYB0 1731 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 GNAI2P04899 355 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 GNAI3P08754 354 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 DNAAF4Q8WXU2 420 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 USP44Q9H0E7 712 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 DDX21Q9NR30 783 aaKnown RBP eCLIP27.9■■■□□ 2.067e-6■■■■■ 43.5
SMAD1-201ENST00000302085 HYPKQ9NX55 129 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 ADCY9O60503 1353 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 PIP4K2BP78356 416 aa27.9■■■□□ 2.06
SMAD1-201ENST00000302085 MSH5O43196 834 aa27.89■■■□□ 2.06
SMAD1-201ENST00000302085 ANP32AP39687 249 aaKnown RBP27.89■■■□□ 2.06
SMAD1-201ENST00000302085 NPM2Q86SE8 214 aaKnown RBP27.89■■■□□ 2.06
SMAD1-201ENST00000302085 C5P01031 1676 aa27.89■■■□□ 2.05
SMAD1-201ENST00000302085 SNRPA1P09661 255 aaKnown RBP27.88■■■□□ 2.05
SMAD1-201ENST00000302085 BEND3Q5T5X7 828 aa27.88■■■□□ 2.05
SMAD1-201ENST00000302085 FMNL2Q96PY5 1086 aa27.88■■■□□ 2.05
SMAD1-201ENST00000302085 SRCIN1Q9C0H9 1055 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms