RNA–Protein interactions for RNA: ENST00000299714.7

SEC11C-201, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 5

Gene SEC11C, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-201ENST00000299714 SYT17Q9BSW7 474 aa17.83■□□□□ 0.44
SEC11C-201ENST00000299714 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
SEC11C-201ENST00000299714 KDRP35968 1356 aa17.82■□□□□ 0.44
SEC11C-201ENST00000299714 HSP90AB1P08238 724 aaKnown RBP17.82■□□□□ 0.44
SEC11C-201ENST00000299714 AMOTQ4VCS5 1084 aa17.82■□□□□ 0.44
SEC11C-201ENST00000299714 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
SEC11C-201ENST00000299714 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
SEC11C-201ENST00000299714 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
SEC11C-201ENST00000299714 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
SEC11C-201ENST00000299714 AK7Q96M32 723 aa17.81■□□□□ 0.44
SEC11C-201ENST00000299714 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
SEC11C-201ENST00000299714 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
SEC11C-201ENST00000299714 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
SEC11C-201ENST00000299714 COL23A1Q86Y22 540 aaPredicted RBP17.8■□□□□ 0.44
SEC11C-201ENST00000299714 FLAD1Q8NFF5 587 aa17.8■□□□□ 0.44
SEC11C-201ENST00000299714 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
SEC11C-201ENST00000299714 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
SEC11C-201ENST00000299714 LOC102724428A0A0B4J2F2 783 aa17.79■□□□□ 0.44
SEC11C-201ENST00000299714 IL13P35225 146 aa17.79■□□□□ 0.44
SEC11C-201ENST00000299714 SIK1P57059 783 aa17.79■□□□□ 0.44
SEC11C-201ENST00000299714 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
SEC11C-201ENST00000299714 CC2D1BQ5T0F9 858 aaKnown RBP17.79■□□□□ 0.44
SEC11C-201ENST00000299714 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
SEC11C-201ENST00000299714 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
SEC11C-201ENST00000299714 YY1P25490 414 aa17.78■□□□□ 0.44
SEC11C-201ENST00000299714 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
SEC11C-201ENST00000299714 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
SEC11C-201ENST00000299714 CHD4Q14839 1912 aa17.78■□□□□ 0.44
SEC11C-201ENST00000299714 MTHFSP49914 203 aa17.77■□□□□ 0.44
SEC11C-201ENST00000299714 ATG3Q9NT62 314 aa17.76■□□□□ 0.43
SEC11C-201ENST00000299714 CICQ96RK0 1608 aaPredicted RBP17.76■□□□□ 0.43
SEC11C-201ENST00000299714 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
SEC11C-201ENST00000299714 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
SEC11C-201ENST00000299714 LINC00116Q8NCU8 138 aa17.75■□□□□ 0.43
SEC11C-201ENST00000299714 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
SEC11C-201ENST00000299714 PHF14O94880 888 aa17.74■□□□□ 0.43
SEC11C-201ENST00000299714 SSFA2P28290 1259 aa17.74■□□□□ 0.43
SEC11C-201ENST00000299714 CABP4P57796 275 aa17.74■□□□□ 0.43
SEC11C-201ENST00000299714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
SEC11C-201ENST00000299714 ITPK1Q13572 414 aa17.73■□□□□ 0.43
SEC11C-201ENST00000299714 MRC1P22897 1456 aa17.73■□□□□ 0.43
SEC11C-201ENST00000299714 ADAMTS7Q9UKP4 1686 aa17.73■□□□□ 0.43
SEC11C-201ENST00000299714 TJP1Q07157 1748 aa17.72■□□□□ 0.43
SEC11C-201ENST00000299714 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
SEC11C-201ENST00000299714 GNPATO15228 680 aa17.71■□□□□ 0.43
SEC11C-201ENST00000299714 HMOX1P09601 288 aa17.71■□□□□ 0.43
SEC11C-201ENST00000299714 CNGB1Q14028 1251 aaPredicted RBP17.71■□□□□ 0.43
SEC11C-201ENST00000299714 AKAP4Q5JQC9 854 aa17.71■□□□□ 0.43
SEC11C-201ENST00000299714 AMIGO3Q86WK7 504 aa17.71■□□□□ 0.43
SEC11C-201ENST00000299714 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
SEC11C-201ENST00000299714 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
SEC11C-201ENST00000299714 NLGN2Q8NFZ4 835 aa17.69■□□□□ 0.42
SEC11C-201ENST00000299714 GPR162Q16538 588 aa17.68■□□□□ 0.42
SEC11C-201ENST00000299714 CNTNAP4Q9C0A0 1308 aa17.68■□□□□ 0.42
SEC11C-201ENST00000299714 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
SEC11C-201ENST00000299714 SMIM5Q71RC9 77 aa17.67■□□□□ 0.42
SEC11C-201ENST00000299714 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
SEC11C-201ENST00000299714 SLC4A9Q96Q91 983 aa17.67■□□□□ 0.42
SEC11C-201ENST00000299714 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
SEC11C-201ENST00000299714 RTCBQ9Y3I0 505 aaKnown RBP17.66■□□□□ 0.42
SEC11C-201ENST00000299714 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
SEC11C-201ENST00000299714 UTRNP46939 3433 aa17.65■□□□□ 0.42
SEC11C-201ENST00000299714 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
SEC11C-201ENST00000299714 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
SEC11C-201ENST00000299714 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
SEC11C-201ENST00000299714 SLC52A2Q9HAB3 445 aa17.65■□□□□ 0.42
SEC11C-201ENST00000299714 CD2APQ9Y5K6 639 aa17.65■□□□□ 0.42
SEC11C-201ENST00000299714 KIF13BQ9NQT8 1826 aa17.64■□□□□ 0.41
SEC11C-201ENST00000299714 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
SEC11C-201ENST00000299714 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
SEC11C-201ENST00000299714 SIPA1L3O60292 1781 aaPredicted RBP17.63■□□□□ 0.41
SEC11C-201ENST00000299714 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
SEC11C-201ENST00000299714 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
SEC11C-201ENST00000299714 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
SEC11C-201ENST00000299714 LGR6Q9HBX8 967 aa17.62■□□□□ 0.41
SEC11C-201ENST00000299714 ABCB7O75027 752 aa17.61■□□□□ 0.41
SEC11C-201ENST00000299714 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
SEC11C-201ENST00000299714 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
SEC11C-201ENST00000299714 CRKLP46109 303 aaKnown RBP17.6■□□□□ 0.41
SEC11C-201ENST00000299714 POLA2Q14181 598 aa17.6■□□□□ 0.41
SEC11C-201ENST00000299714 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
SEC11C-201ENST00000299714 KIAA1551Q9HCM1 1747 aa17.59■□□□□ 0.41
SEC11C-201ENST00000299714 MMP10P09238 476 aa17.59■□□□□ 0.41
SEC11C-201ENST00000299714 RFC4P35249 363 aa17.59■□□□□ 0.41
SEC11C-201ENST00000299714 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
SEC11C-201ENST00000299714 YBX3P16989 372 aaKnown RBP eCLIP17.58■□□□□ 0.4
SEC11C-201ENST00000299714 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
SEC11C-201ENST00000299714 NLGN1Q8N2Q7 840 aa17.58■□□□□ 0.4
SEC11C-201ENST00000299714 ARHGEF1Q92888 912 aaKnown RBP17.58■□□□□ 0.4
SEC11C-201ENST00000299714 NUDCQ9Y266 331 aa17.58■□□□□ 0.4
SEC11C-201ENST00000299714 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
SEC11C-201ENST00000299714 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
SEC11C-201ENST00000299714 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
SEC11C-201ENST00000299714 C10orf71Q711Q0 1435 aa17.56■□□□□ 0.4
SEC11C-201ENST00000299714 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
SEC11C-201ENST00000299714 GYS1P13807 737 aa17.56■□□□□ 0.4
SEC11C-201ENST00000299714 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
SEC11C-201ENST00000299714 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
SEC11C-201ENST00000299714 PRKAR2BP31323 418 aa17.55■□□□□ 0.4
SEC11C-201ENST00000299714 TEFQ10587 303 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms