RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
SPRED1-201ENST00000299084 IKBKGQ9Y6K9 419 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 KIF4AO95239 1232 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
SPRED1-201ENST00000299084 ZBTB24O43167 697 aaPredicted RBP16.67■□□□□ 0.26
SPRED1-201ENST00000299084 TMCO3Q6UWJ1 677 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.67■□□□□ 0.26
SPRED1-201ENST00000299084 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 PRC1O43663 620 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
SPRED1-201ENST00000299084 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 IDH1O75874 414 aaKnown RBP16.67■□□□□ 0.26
SPRED1-201ENST00000299084 STXBP4Q6ZWJ1 553 aa16.67■□□□□ 0.26
SPRED1-201ENST00000299084 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
SPRED1-201ENST00000299084 CEP126Q9P2H0 1117 aa16.66■□□□□ 0.26
SPRED1-201ENST00000299084 SHTN1A0MZ66 631 aa16.66■□□□□ 0.26
SPRED1-201ENST00000299084 SNX16P57768 344 aa16.66■□□□□ 0.26
SPRED1-201ENST00000299084 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
SPRED1-201ENST00000299084 IPO4Q8TEX9 1081 aaKnown RBP16.66■□□□□ 0.26
SPRED1-201ENST00000299084 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
SPRED1-201ENST00000299084 FIBPO43427 364 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 TNNT1P13805 278 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 ALS2CR12Q96Q35 445 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
SPRED1-201ENST00000299084 LUZP1Q86V48 1076 aa16.64■□□□□ 0.26
SPRED1-201ENST00000299084 THEMISQ8N1K5 641 aaPredicted RBP16.64■□□□□ 0.25
SPRED1-201ENST00000299084 FHOD3Q2V2M9 1422 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 MBD3O95983 291 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 MRE11P49959 708 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 METTL24Q5JXM2 366 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 JPH4Q96JJ6 628 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 KIF20AO95235 890 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 TRMT1LQ7Z2T5 733 aaKnown RBP16.64■□□□□ 0.25
SPRED1-201ENST00000299084 MPNDQ8N594 471 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 CABP5Q9NP86 173 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
SPRED1-201ENST00000299084 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
SPRED1-201ENST00000299084 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
SPRED1-201ENST00000299084 NLRP5P59047 1200 aa16.63■□□□□ 0.25
SPRED1-201ENST00000299084 RNF187Q5TA31 235 aaPredicted RBP16.63■□□□□ 0.25
SPRED1-201ENST00000299084 NEK4P51957 841 aa16.63■□□□□ 0.25
SPRED1-201ENST00000299084 BTBD11A6QL63 1104 aa16.63■□□□□ 0.25
SPRED1-201ENST00000299084 CCDC174Q6PII3 467 aa16.63■□□□□ 0.25
SPRED1-201ENST00000299084 ZNF622Q969S3 477 aaKnown RBP eCLIP16.63■□□□□ 0.25
SPRED1-201ENST00000299084 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
SPRED1-201ENST00000299084 C6orf163Q5TEZ5 329 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 PPP1R9BQ96SB3 815 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 ARHGAP29Q52LW3 1261 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
SPRED1-201ENST00000299084 L3MBTL2Q969R5 705 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
SPRED1-201ENST00000299084 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 DAAM2Q86T65 1068 aa16.62■□□□□ 0.25
SPRED1-201ENST00000299084 C6orf229H3BNL8 230 aa16.61■□□□□ 0.25
SPRED1-201ENST00000299084 APBB1IPQ7Z5R6 666 aaPredicted RBP16.61■□□□□ 0.25
SPRED1-201ENST00000299084 TMOD3Q9NYL9 352 aa16.61■□□□□ 0.25
SPRED1-201ENST00000299084 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
SPRED1-201ENST00000299084 PSMC4P43686 418 aa16.61■□□□□ 0.25
SPRED1-201ENST00000299084 CCDC14Q49A88 953 aa16.61■□□□□ 0.25
SPRED1-201ENST00000299084 MAP9Q49MG5 647 aa16.61■□□□□ 0.25
SPRED1-201ENST00000299084 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
SPRED1-201ENST00000299084 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
SPRED1-201ENST00000299084 B4DLN1 442 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 MRPL12P52815 198 aaKnown RBP16.6■□□□□ 0.25
SPRED1-201ENST00000299084 KRT85P78386 507 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 A0A087WZG4 1122 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
SPRED1-201ENST00000299084 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 MAP4K4O95819 1239 aaPredicted RBP16.6■□□□□ 0.25
SPRED1-201ENST00000299084 AACSQ86V21 672 aa16.6■□□□□ 0.25
SPRED1-201ENST00000299084 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 CCDC196A0A1B0GTZ2 297 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 MCM3P25205 808 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 ANKLE2Q86XL3 938 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 ST5P78524 1137 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 STX6O43752 255 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 LPXNO60711 386 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
SPRED1-201ENST00000299084 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
SPRED1-201ENST00000299084 DDX12PQ92771 950 aa16.59■□□□□ 0.25
SPRED1-201ENST00000299084 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.25
SPRED1-201ENST00000299084 CCDC85AQ96PX6 553 aaPredicted RBP16.58■□□□□ 0.25
SPRED1-201ENST00000299084 PLS1Q14651 629 aa16.58■□□□□ 0.25
SPRED1-201ENST00000299084 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.25
SPRED1-201ENST00000299084 CCDC160A6NGH7 325 aa16.58■□□□□ 0.24
SPRED1-201ENST00000299084 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
SPRED1-201ENST00000299084 DDX11Q96FC9 970 aa16.58■□□□□ 0.24
SPRED1-201ENST00000299084 GAS8O95995 478 aa16.58■□□□□ 0.24
SPRED1-201ENST00000299084 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
SPRED1-201ENST00000299084 RIOK3O14730 519 aaKnown RBP16.57■□□□□ 0.24
SPRED1-201ENST00000299084 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms