RNA–Protein interactions for RNA: ENST00000295925.5

CCNL1-201, Transcript of cyclin L1, humanhuman

TSL 1 (best) BASIC

Gene CCNL1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-201ENST00000295925 MCM10Q7L590 875 aa21.67■■□□□ 1.06
CCNL1-201ENST00000295925 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
CCNL1-201ENST00000295925 SMARCC1Q92922 1105 aaPredicted RBP21.67■■□□□ 1.06
CCNL1-201ENST00000295925 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
CCNL1-201ENST00000295925 LRRC4BQ9NT99 713 aa21.67■■□□□ 1.06
CCNL1-201ENST00000295925 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
CCNL1-201ENST00000295925 PAPPAQ13219 1627 aa21.66■■□□□ 1.06
CCNL1-201ENST00000295925 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
CCNL1-201ENST00000295925 RRP7AQ9Y3A4 280 aaKnown RBP21.66■■□□□ 1.06
CCNL1-201ENST00000295925 C5P01031 1676 aa21.66■■□□□ 1.06
CCNL1-201ENST00000295925 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
CCNL1-201ENST00000295925 TEFQ10587 303 aa21.65■■□□□ 1.06
CCNL1-201ENST00000295925 RUNDC1Q96C34 613 aa21.65■■□□□ 1.06
CCNL1-201ENST00000295925 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
CCNL1-201ENST00000295925 TAF1LQ8IZX4 1826 aa21.64■■□□□ 1.06
CCNL1-201ENST00000295925 CEMIPQ8WUJ3 1361 aa21.63■■□□□ 1.05
CCNL1-201ENST00000295925 R3HDM1Q15032 1099 aaKnown RBP21.63■■□□□ 1.05
CCNL1-201ENST00000295925 NEUROD2Q15784 382 aa21.63■■□□□ 1.05
CCNL1-201ENST00000295925 SLC27A3Q5K4L6 730 aa21.63■■□□□ 1.05
CCNL1-201ENST00000295925 NBPF14Q5TI25 921 aa21.63■■□□□ 1.05
CCNL1-201ENST00000295925 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
CCNL1-201ENST00000295925 TMPOP42166 694 aaKnown RBP21.62■■□□□ 1.05
CCNL1-201ENST00000295925 SLC39A6Q13433 755 aa21.62■■□□□ 1.05
CCNL1-201ENST00000295925 RBM42Q9BTD8 480 aaKnown RBP21.62■■□□□ 1.05
CCNL1-201ENST00000295925 THUMPD2Q9BTF0 503 aaKnown RBP21.62■■□□□ 1.05
CCNL1-201ENST00000295925 LOC102724428A0A0B4J2F2 783 aa21.61■■□□□ 1.05
CCNL1-201ENST00000295925 PTCD1O75127 700 aaKnown RBP21.61■■□□□ 1.05
CCNL1-201ENST00000295925 SIK1P57059 783 aa21.61■■□□□ 1.05
CCNL1-201ENST00000295925 RIPK4P57078 832 aa21.61■■□□□ 1.05
CCNL1-201ENST00000295925 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
CCNL1-201ENST00000295925 HTATSF1O43719 755 aaKnown RBP21.6■■□□□ 1.05
CCNL1-201ENST00000295925 STK32BQ9NY57 414 aa21.6■■□□□ 1.05
CCNL1-201ENST00000295925 TUBGCP6Q96RT7 1819 aa21.59■■□□□ 1.05
CCNL1-201ENST00000295925 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
CCNL1-201ENST00000295925 UBR2Q8IWV8 1755 aa21.59■■□□□ 1.05
CCNL1-201ENST00000295925 ATP6V1AP38606 617 aa21.58■■□□□ 1.05
CCNL1-201ENST00000295925 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.05
CCNL1-201ENST00000295925 C4BP0C0L5 1744 aa21.58■■□□□ 1.04
CCNL1-201ENST00000295925 TJP1Q07157 1748 aa21.58■■□□□ 1.04
CCNL1-201ENST00000295925 KCPQ6ZWJ8 1503 aa21.57■■□□□ 1.04
CCNL1-201ENST00000295925 APAF1O14727 1248 aa21.57■■□□□ 1.04
CCNL1-201ENST00000295925 ITPK1Q13572 414 aa21.57■■□□□ 1.04
CCNL1-201ENST00000295925 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
CCNL1-201ENST00000295925 COL5A3P25940 1745 aaPredicted RBP21.56■■□□□ 1.04
CCNL1-201ENST00000295925 SLC15A2Q16348 729 aa21.56■■□□□ 1.04
CCNL1-201ENST00000295925 TTC5Q8N0Z6 440 aa21.56■■□□□ 1.04
CCNL1-201ENST00000295925 ZNF831Q5JPB2 1677 aa21.56■■□□□ 1.04
CCNL1-201ENST00000295925 BTBD11A6QL63 1104 aa21.55■■□□□ 1.04
CCNL1-201ENST00000295925 LINC00116Q8NCU8 138 aa21.55■■□□□ 1.04
CCNL1-201ENST00000295925 LMOD3Q0VAK6 560 aa21.54■■□□□ 1.04
CCNL1-201ENST00000295925 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
CCNL1-201ENST00000295925 KCNQ3O43525 872 aa21.53■■□□□ 1.04
CCNL1-201ENST00000295925 ZNF790Q6PG37 636 aa21.53■■□□□ 1.04
CCNL1-201ENST00000295925 MIER1Q8N108 512 aa21.53■■□□□ 1.04
CCNL1-201ENST00000295925 MIS18AQ9NYP9 233 aa21.53■■□□□ 1.04
CCNL1-201ENST00000295925 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
CCNL1-201ENST00000295925 CASZ1Q86V15 1759 aa21.52■■□□□ 1.04
CCNL1-201ENST00000295925 TRIM35Q9UPQ4 493 aa21.52■■□□□ 1.04
CCNL1-201ENST00000295925 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.03
CCNL1-201ENST00000295925 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
CCNL1-201ENST00000295925 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
CCNL1-201ENST00000295925 PDGFDQ9GZP0 370 aaPredicted RBP21.51■■□□□ 1.03
CCNL1-201ENST00000295925 TFCP2L1Q9NZI6 479 aa21.51■■□□□ 1.03
CCNL1-201ENST00000295925 UBR3Q6ZT12 1888 aa21.51■■□□□ 1.03
CCNL1-201ENST00000295925 CCER2I3L3R5 266 aa21.5■■□□□ 1.03
CCNL1-201ENST00000295925 ZNF496Q96IT1 587 aaPredicted RBP21.5■■□□□ 1.03
CCNL1-201ENST00000295925 AK7Q96M32 723 aa21.5■■□□□ 1.03
CCNL1-201ENST00000295925 MYH14Q7Z406 1995 aaKnown RBP21.49■■□□□ 1.03
CCNL1-201ENST00000295925 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
CCNL1-201ENST00000295925 SMIM5Q71RC9 77 aa21.48■■□□□ 1.03
CCNL1-201ENST00000295925 GNPATO15228 680 aa21.47■■□□□ 1.03
CCNL1-201ENST00000295925 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
CCNL1-201ENST00000295925 PNPLA7Q6ZV29 1317 aa21.47■■□□□ 1.03
CCNL1-201ENST00000295925 HEG1Q9ULI3 1381 aa21.47■■□□□ 1.03
CCNL1-201ENST00000295925 PHF14O94880 888 aa21.46■■□□□ 1.03
CCNL1-201ENST00000295925 AMIGO3Q86WK7 504 aa21.46■■□□□ 1.03
CCNL1-201ENST00000295925 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
CCNL1-201ENST00000295925 LAS1LQ9Y4W2 734 aaKnown RBP21.46■■□□□ 1.03
CCNL1-201ENST00000295925 MSH5O43196 834 aa21.45■■□□□ 1.02
CCNL1-201ENST00000295925 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.02
CCNL1-201ENST00000295925 CRKLP46109 303 aaKnown RBP21.45■■□□□ 1.02
CCNL1-201ENST00000295925 TSPYL4Q9UJ04 414 aa21.45■■□□□ 1.02
CCNL1-201ENST00000295925 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
CCNL1-201ENST00000295925 ZBTB7AO95365 584 aa21.43■■□□□ 1.02
CCNL1-201ENST00000295925 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
CCNL1-201ENST00000295925 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
CCNL1-201ENST00000295925 LAMB4A4D0S4 1761 aa21.42■■□□□ 1.02
CCNL1-201ENST00000295925 COL23A1Q86Y22 540 aaPredicted RBP21.42■■□□□ 1.02
CCNL1-201ENST00000295925 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.41■■□□□ 1.02
CCNL1-201ENST00000295925 CYP19A1P11511 503 aaPredicted RBP21.41■■□□□ 1.02
CCNL1-201ENST00000295925 CCDC87Q9NVE4 849 aa21.41■■□□□ 1.02
CCNL1-201ENST00000295925 C4AP0C0L4 1744 aa21.41■■□□□ 1.02
CCNL1-201ENST00000295925 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
CCNL1-201ENST00000295925 RTCBQ9Y3I0 505 aaKnown RBP21.4■■□□□ 1.02
CCNL1-201ENST00000295925 EIF4A1P60842 406 aaKnown RBP21.39■■□□□ 1.01
CCNL1-201ENST00000295925 INTS5Q6P9B9 1019 aaKnown RBP21.39■■□□□ 1.01
CCNL1-201ENST00000295925 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
CCNL1-201ENST00000295925 LRP5O75197 1615 aa21.38■■□□□ 1.01
CCNL1-201ENST00000295925 STARD3NLO95772 234 aa21.38■■□□□ 1.01
CCNL1-201ENST00000295925 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms