RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 ZBED9Q6R2W3 1325 aa36.28■■■■□ 3.4
CHCHD4-201ENST00000295767 TMOD3Q9NYL9 352 aa36.27■■■■□ 3.4
CHCHD4-201ENST00000295767 PAPPAQ13219 1627 aa36.27■■■■□ 3.4
CHCHD4-201ENST00000295767 KDM3BQ7LBC6 1761 aa36.26■■■■□ 3.4
CHCHD4-201ENST00000295767 WDR63Q8IWG1 891 aa36.26■■■■□ 3.39
CHCHD4-201ENST00000295767 CALD1Q05682 793 aaKnown RBP36.25■■■■□ 3.39
CHCHD4-201ENST00000295767 PTF1AQ7RTS3 328 aa36.24■■■■□ 3.39
CHCHD4-201ENST00000295767 PIGBQ92521 554 aa36.24■■■■□ 3.39
CHCHD4-201ENST00000295767 TAF7Q15545 349 aaPredicted RBP36.23■■■■□ 3.39
CHCHD4-201ENST00000295767 TNS1Q9HBL0 1735 aaKnown RBP36.22■■■■□ 3.39
CHCHD4-201ENST00000295767 IL16Q14005 1332 aa36.21■■■■□ 3.39
CHCHD4-201ENST00000295767 TRIM37O94972 964 aa36.2■■■■□ 3.39
CHCHD4-201ENST00000295767 LAS1LQ9Y4W2 734 aaKnown RBP36.2■■■■□ 3.39
CHCHD4-201ENST00000295767 MIS18AQ9NYP9 233 aa36.19■■■■□ 3.38
CHCHD4-201ENST00000295767 GOLGA2Q08379 1002 aa36.19■■■■□ 3.38
CHCHD4-201ENST00000295767 IFT57Q9NWB7 429 aa36.19■■■■□ 3.38
CHCHD4-201ENST00000295767 UBR2Q8IWV8 1755 aa36.18■■■■□ 3.38
CHCHD4-201ENST00000295767 BTBD11A6QL63 1104 aa36.18■■■■□ 3.38
CHCHD4-201ENST00000295767 ZNF853P0CG23 659 aa36.18■■■■□ 3.38
CHCHD4-201ENST00000295767 CFAP44Q96MT7 982 aa36.18■■■■□ 3.38
CHCHD4-201ENST00000295767 BCL11BQ9C0K0 894 aaPredicted RBP36.18■■■■□ 3.38
CHCHD4-201ENST00000295767 SPINK5Q9NQ38 1064 aaPredicted RBP36.18■■■■□ 3.38
CHCHD4-201ENST00000295767 GNAI1P63096 354 aa36.16■■■■□ 3.38
CHCHD4-201ENST00000295767 CHL1O00533 1208 aa36.16■■■■□ 3.38
CHCHD4-201ENST00000295767 SLC39A6Q13433 755 aa36.15■■■■□ 3.38
CHCHD4-201ENST00000295767 CDCA7LQ96GN5 454 aa36.15■■■■□ 3.38
CHCHD4-201ENST00000295767 TSPYL4Q9UJ04 414 aa36.14■■■■□ 3.38
CHCHD4-201ENST00000295767 ASAP1Q9ULH1 1129 aa36.14■■■■□ 3.38
CHCHD4-201ENST00000295767 BABAM1Q9NWV8 329 aa36.13■■■■□ 3.37
CHCHD4-201ENST00000295767 ILDR2Q71H61 639 aa36.12■■■■□ 3.37
CHCHD4-201ENST00000295767 MBIPQ9NS73 344 aa36.12■■■■□ 3.37
CHCHD4-201ENST00000295767 ATG3Q9NT62 314 aa36.12■■■■□ 3.37
CHCHD4-201ENST00000295767 KCNQ3O43525 872 aa36.12■■■■□ 3.37
CHCHD4-201ENST00000295767 ZNF790Q6PG37 636 aa36.11■■■■□ 3.37
CHCHD4-201ENST00000295767 TSR2Q969E8 191 aaKnown RBP36.1■■■■□ 3.37
CHCHD4-201ENST00000295767 KCPQ6ZWJ8 1503 aa36.1■■■■□ 3.37
CHCHD4-201ENST00000295767 LY75O60449 1722 aa36.1■■■■□ 3.37
CHCHD4-201ENST00000295767 SLFN5Q08AF3 891 aa36.09■■■■□ 3.37
CHCHD4-201ENST00000295767 E9PSI1 815 aa36.08■■■■□ 3.37
CHCHD4-201ENST00000295767 TTC5Q8N0Z6 440 aa36.08■■■■□ 3.37
CHCHD4-201ENST00000295767 FANCIQ9NVI1 1328 aa36.07■■■■□ 3.37
CHCHD4-201ENST00000295767 MYH16Q9H6N6 1097 aa36.07■■■■□ 3.36
CHCHD4-201ENST00000295767 PALLDQ8WX93 1383 aa36.06■■■■□ 3.36
CHCHD4-201ENST00000295767 SMARCC1Q92922 1105 aaPredicted RBP36.04■■■■□ 3.36
CHCHD4-201ENST00000295767 TRMT2AQ8IZ69 625 aaKnown RBP36.03■■■■□ 3.36
CHCHD4-201ENST00000295767 RGPD3A6NKT7 1758 aaPredicted RBP36.03■■■■□ 3.36
CHCHD4-201ENST00000295767 RGPD4Q7Z3J3 1758 aa36.03■■■■□ 3.36
CHCHD4-201ENST00000295767 ZNF496Q96IT1 587 aaPredicted RBP36.02■■■■□ 3.36
CHCHD4-201ENST00000295767 C5P01031 1676 aa36.02■■■■□ 3.36
CHCHD4-201ENST00000295767 PTCD1O75127 700 aaKnown RBP36.01■■■■□ 3.36
CHCHD4-201ENST00000295767 EIF4A1P60842 406 aaKnown RBP36.01■■■■□ 3.36
CHCHD4-201ENST00000295767 APBA3O96018 575 aa36.01■■■■□ 3.35
CHCHD4-201ENST00000295767 DUSP27Q5VZP5 1158 aa36■■■■□ 3.35
CHCHD4-201ENST00000295767 ZNF831Q5JPB2 1677 aa36■■■■□ 3.35
CHCHD4-201ENST00000295767 TJP1Q07157 1748 aa35.99■■■■□ 3.35
CHCHD4-201ENST00000295767 KRT24Q2M2I5 525 aa35.98■■■■□ 3.35
CHCHD4-201ENST00000295767 FMNL2Q96PY5 1086 aa35.98■■■■□ 3.35
CHCHD4-201ENST00000295767 RBM42Q9BTD8 480 aaKnown RBP35.98■■■■□ 3.35
CHCHD4-201ENST00000295767 CICQ96RK0 1608 aaPredicted RBP35.98■■■■□ 3.35
CHCHD4-201ENST00000295767 HEG1Q9ULI3 1381 aa35.97■■■■□ 3.35
CHCHD4-201ENST00000295767 LAMB4A4D0S4 1761 aa35.96■■■■□ 3.35
CHCHD4-201ENST00000295767 SLC4A9Q96Q91 983 aa35.95■■■■□ 3.35
CHCHD4-201ENST00000295767 LOC102724428A0A0B4J2F2 783 aa35.94■■■■□ 3.34
CHCHD4-201ENST00000295767 SIK1P57059 783 aa35.94■■■■□ 3.34
CHCHD4-201ENST00000295767 EXOSC9Q06265 439 aaKnown RBP35.94■■■■□ 3.34
CHCHD4-201ENST00000295767 SF3B2Q13435 895 aaKnown RBP35.94■■■■□ 3.34
CHCHD4-201ENST00000295767 TAF1LQ8IZX4 1826 aa35.94■■■■□ 3.34
CHCHD4-201ENST00000295767 PLSCR1O15162 318 aa35.94■■■■□ 3.34
CHCHD4-201ENST00000295767 C8orf58Q8NAV2 365 aa35.93■■■■□ 3.34
CHCHD4-201ENST00000295767 COL5A3P25940 1745 aaPredicted RBP35.92■■■■□ 3.34
CHCHD4-201ENST00000295767 CCDC125Q86Z20 511 aa35.92■■■■□ 3.34
CHCHD4-201ENST00000295767 PRAMEF22A3QJZ6 481 aa35.9■■■■□ 3.34
CHCHD4-201ENST00000295767 UPF1Q92900 1129 aaKnown RBP eCLIP35.9■■■■□ 3.34
CHCHD4-201ENST00000295767 ELL2O00472 640 aaPredicted RBP35.9■■■■□ 3.34
CHCHD4-201ENST00000295767 GIGYF1O75420 1035 aaPredicted RBP35.9■■■■□ 3.34
CHCHD4-201ENST00000295767 VSIG10Q8N0Z9 540 aa35.9■■■■□ 3.34
CHCHD4-201ENST00000295767 TSPYL6Q8N831 410 aa35.9■■■■□ 3.34
CHCHD4-201ENST00000295767 SNRPA1P09661 255 aaKnown RBP35.88■■■■□ 3.33
CHCHD4-201ENST00000295767 ATP6V1AP38606 617 aa35.88■■■■□ 3.33
CHCHD4-201ENST00000295767 KCNQ4P56696 695 aa35.88■■■■□ 3.33
CHCHD4-201ENST00000295767 BAG6P46379 1132 aa35.87■■■■□ 3.33
CHCHD4-201ENST00000295767 CCNL1Q9UK58 526 aaPredicted RBP35.87■■■■□ 3.33
CHCHD4-201ENST00000295767 RREB1Q92766 1687 aa35.87■■■■□ 3.33
CHCHD4-201ENST00000295767 EN1Q05925 392 aaPredicted RBP35.86■■■■□ 3.33
CHCHD4-201ENST00000295767 ITPK1Q13572 414 aa35.86■■■■□ 3.33
CHCHD4-201ENST00000295767 TXNRD1Q16881 649 aa35.86■■■■□ 3.33
CHCHD4-201ENST00000295767 TWISTNBQ3B726 338 aaPredicted RBP35.86■■■■□ 3.33
CHCHD4-201ENST00000295767 DNAJC10Q8IXB1 793 aa35.86■■■■□ 3.33
CHCHD4-201ENST00000295767 PROM2Q8N271 834 aa35.86■■■■□ 3.33
CHCHD4-201ENST00000295767 DEFB132Q7Z7B7 95 aa35.85■■■■□ 3.33
CHCHD4-201ENST00000295767 CAMKK2Q96RR4 588 aa35.83■■■■□ 3.33
CHCHD4-201ENST00000295767 LRRC4BQ9NT99 713 aa35.83■■■■□ 3.33
CHCHD4-201ENST00000295767 HOXB7P09629 217 aa35.83■■■■□ 3.33
CHCHD4-201ENST00000295767 SLC27A3Q5K4L6 730 aa35.83■■■■□ 3.33
CHCHD4-201ENST00000295767 USP16Q9Y5T5 823 aa35.83■■■■□ 3.33
CHCHD4-201ENST00000295767 EZH2Q15910 746 aaKnown RBP35.82■■■■□ 3.32
CHCHD4-201ENST00000295767 MYH14Q7Z406 1995 aaKnown RBP35.81■■■■□ 3.32
CHCHD4-201ENST00000295767 SOS1Q07889 1333 aaPredicted RBP35.8■■■■□ 3.32
CHCHD4-201ENST00000295767 NUP188Q5SRE5 1749 aa35.8■■■■□ 3.32
CHCHD4-201ENST00000295767 VAMP4O75379 141 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms