RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 SHTN1A0MZ66 631 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 CABP1Q9NZU7 370 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 RAPGEF3O95398 923 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 ISM2Q6H9L7 571 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 UBA5Q9GZZ9 404 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 C16orf45Q96MC5 204 aaPredicted RBP18.84■□□□□ 0.61
SSRP1-202ENST00000293880 SERPINA10Q9UK55 444 aa18.84■□□□□ 0.61
SSRP1-202ENST00000293880 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.61
SSRP1-202ENST00000293880 CRACR2AQ9BSW2 395 aa18.83■□□□□ 0.6
SSRP1-202ENST00000293880 CCDC82Q8N4S0 544 aa18.83■□□□□ 0.6
SSRP1-202ENST00000293880 GDPD2Q9HCC8 539 aa18.83■□□□□ 0.6
SSRP1-202ENST00000293880 EZRP15311 586 aaKnown RBP18.83■□□□□ 0.6
SSRP1-202ENST00000293880 PPP4R3BQ5MIZ7 849 aa18.83■□□□□ 0.6
SSRP1-202ENST00000293880 C20orf194Q5TEA3 1177 aa18.83■□□□□ 0.6
SSRP1-202ENST00000293880 ZSCAN30Q86W11 494 aa18.82■□□□□ 0.6
SSRP1-202ENST00000293880 TXLNBQ8N3L3 684 aa18.82■□□□□ 0.6
SSRP1-202ENST00000293880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.82■□□□□ 0.6
SSRP1-202ENST00000293880 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
SSRP1-202ENST00000293880 ZNF397Q8NF99 534 aaPredicted RBP18.82■□□□□ 0.6
SSRP1-202ENST00000293880 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
SSRP1-202ENST00000293880 GPRASP1Q5JY77 1395 aa18.82■□□□□ 0.6
SSRP1-202ENST00000293880 CDKL5O76039 1030 aa18.82■□□□□ 0.6
SSRP1-202ENST00000293880 CTNNBL1Q8WYA6 563 aaPredicted RBP18.81■□□□□ 0.6
SSRP1-202ENST00000293880 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
SSRP1-202ENST00000293880 ZNF530Q6P9A1 599 aaPredicted RBP18.81■□□□□ 0.6
SSRP1-202ENST00000293880 USP25Q9UHP3 1055 aa18.81■□□□□ 0.6
SSRP1-202ENST00000293880 GTF2A1P52655 376 aaPredicted RBP18.81■□□□□ 0.6
SSRP1-202ENST00000293880 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
SSRP1-202ENST00000293880 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
SSRP1-202ENST00000293880 SPA17Q15506 151 aa18.8■□□□□ 0.6
SSRP1-202ENST00000293880 ZSCAN31Q96LW9 406 aaPredicted RBP18.8■□□□□ 0.6
SSRP1-202ENST00000293880 ANKRD50Q9ULJ7 1429 aa18.8■□□□□ 0.6
SSRP1-202ENST00000293880 CEP63Q96MT8 703 aa18.8■□□□□ 0.6
SSRP1-202ENST00000293880 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 NUP88Q99567 741 aaPredicted RBP18.79■□□□□ 0.6
SSRP1-202ENST00000293880 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 SLC26A8Q96RN1 970 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 KIF21BO75037 1637 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 LIG1P18858 919 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 BIN1O00499 593 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 IFFO1Q0D2I5 559 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 KIF4BQ2VIQ3 1234 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 CLGNO14967 610 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 CCDC183Q5T5S1 534 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 ZSCAN25Q6NSZ9 544 aa18.79■□□□□ 0.6
SSRP1-202ENST00000293880 KIF5CO60282 957 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
SSRP1-202ENST00000293880 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 MINDY4BA8MYZ0 360 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 AIDAQ96BJ3 306 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 BOLA2Q9H3K6 86 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 BMP2KQ9NSY1 1161 aaPredicted RBP18.78■□□□□ 0.6
SSRP1-202ENST00000293880 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
SSRP1-202ENST00000293880 NCOA2Q15596 1464 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
SSRP1-202ENST00000293880 MCM10Q7L590 875 aa18.77■□□□□ 0.6
SSRP1-202ENST00000293880 TOP1P11387 765 aaKnown RBP18.77■□□□□ 0.6
SSRP1-202ENST00000293880 NBPF8Q3BBV2 869 aa18.77■□□□□ 0.6
SSRP1-202ENST00000293880 ATP2C2O75185 946 aa18.77■□□□□ 0.6
SSRP1-202ENST00000293880 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
SSRP1-202ENST00000293880 CCT2P78371 535 aaKnown RBP18.77■□□□□ 0.6
SSRP1-202ENST00000293880 PUS7Q96PZ0 661 aaKnown RBP18.77■□□□□ 0.6
SSRP1-202ENST00000293880 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.59
SSRP1-202ENST00000293880 CALCOCO1Q9P1Z2 691 aa18.77■□□□□ 0.59
SSRP1-202ENST00000293880 TTC16Q8NEE8 873 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 TMC6Q7Z403 805 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 CCDC91Q7Z6B0 441 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 ABCF2Q9UG63 623 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 ERBINQ96RT1 1412 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 TRMT1LQ7Z2T5 733 aaKnown RBP18.76■□□□□ 0.59
SSRP1-202ENST00000293880 CACNA2D4Q7Z3S7 1137 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
SSRP1-202ENST00000293880 LUZP1Q86V48 1076 aa18.75■□□□□ 0.59
SSRP1-202ENST00000293880 TNPO1Q92973 898 aaKnown RBP18.75■□□□□ 0.59
SSRP1-202ENST00000293880 CEP131Q9UPN4 1083 aa18.75■□□□□ 0.59
SSRP1-202ENST00000293880 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
SSRP1-202ENST00000293880 MNAT1P51948 309 aa18.75■□□□□ 0.59
SSRP1-202ENST00000293880 WDR63Q8IWG1 891 aa18.74■□□□□ 0.59
SSRP1-202ENST00000293880 TERF1P54274 439 aa18.74■□□□□ 0.59
SSRP1-202ENST00000293880 PSMD1Q99460 953 aa18.74■□□□□ 0.59
SSRP1-202ENST00000293880 MX1P20591 662 aa18.74■□□□□ 0.59
SSRP1-202ENST00000293880 ZSCAN12O43309 604 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 SCAPERQ9BY12 1400 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 ANAPC15P60006 121 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
SSRP1-202ENST00000293880 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 IRX3P78415 501 aaPredicted RBP18.73■□□□□ 0.59
SSRP1-202ENST00000293880 FAM107BQ9H098 131 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 CCDC8Q9H0W5 538 aaPredicted RBP18.73■□□□□ 0.59
SSRP1-202ENST00000293880 FKBP15Q5T1M5 1219 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 WASF1Q92558 559 aa18.73■□□□□ 0.59
SSRP1-202ENST00000293880 SPTY2D1Q68D10 685 aaPredicted RBP18.72■□□□□ 0.59
SSRP1-202ENST00000293880 MYD88Q99836 296 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms