RNA–Protein interactions for RNA: ENST00000290317.9

SLC13A3-202, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-202ENST00000290317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.871e-9■□□□□ 8.3
SLC13A3-202ENST00000290317 KIF1AQ12756 1690 aa9.59□□□□□ -0.87
SLC13A3-202ENST00000290317 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 RNMTO43148 476 aaKnown RBP9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 VAMP4O75379 141 aa9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 DDX58O95786 925 aaKnown RBP9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 RNF123Q5XPI4 1314 aa9.58□□□□□ -0.88
SLC13A3-202ENST00000290317 CENPQQ7L2Z9 268 aaPredicted RBP9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 C8orf58Q8NAV2 365 aa9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 CARD10Q9BWT7 1032 aa9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 WDR17Q8IZU2 1322 aa9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 ANKRD26Q9UPS8 1709 aa9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 SOS1Q07889 1333 aaPredicted RBP9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 KDRP35968 1356 aa9.57□□□□□ -0.88
SLC13A3-202ENST00000290317 MVPQ14764 893 aaKnown RBP9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 IL17REQ8NFR9 667 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 C20orf194Q5TEA3 1177 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 ARHGAP45Q92619 1136 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 RGPD8O14715 1765 aaPredicted RBP9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 TSPYL6Q8N831 410 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 CERKQ8TCT0 537 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 C8orf37Q96NL8 207 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 LGR6Q9HBX8 967 aa9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
SLC13A3-202ENST00000290317 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 HMMRO75330 724 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 TMOD3Q9NYL9 352 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 NEXNQ0ZGT2 675 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 CPDO75976 1380 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 TPM2P07951 284 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 TRIM27P14373 513 aa9.55□□□□□ -0.88
SLC13A3-202ENST00000290317 PTPRCP08575 1304 aa9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 PDE4AP27815 886 aa9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 TRIM44Q96DX7 344 aaPredicted RBP9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 FMNL2Q96PY5 1086 aa9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 CCT4P50991 539 aaKnown RBP9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 MRPL50Q8N5N7 158 aaKnown RBP9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 PHKG2P15735 406 aa9.54□□□□□ -0.88
SLC13A3-202ENST00000290317 SLC4A3P48751 1232 aa9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 TMEM57Q8N5G2 664 aa9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 DBF4Q9UBU7 674 aaPredicted RBP9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 DDB1Q16531 1140 aa9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
SLC13A3-202ENST00000290317 HOXB7P09629 217 aa9.52□□□□□ -0.88
SLC13A3-202ENST00000290317 AIMP1Q12904 312 aaKnown RBP9.52□□□□□ -0.88
SLC13A3-202ENST00000290317 KRT24Q2M2I5 525 aa9.52□□□□□ -0.88
SLC13A3-202ENST00000290317 SLC52A2Q9HAB3 445 aa9.52□□□□□ -0.88
SLC13A3-202ENST00000290317 GNAI3P08754 354 aa9.52□□□□□ -0.89
SLC13A3-202ENST00000290317 SNRPA1P09661 255 aaKnown RBP9.52□□□□□ -0.89
SLC13A3-202ENST00000290317 CLCN1P35523 988 aa9.52□□□□□ -0.89
SLC13A3-202ENST00000290317 C9orf78Q9NZ63 289 aaPredicted RBP9.52□□□□□ -0.89
SLC13A3-202ENST00000290317 PIK3C2AO00443 1686 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 PTCD1O75127 700 aaKnown RBP9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 ARID3AQ99856 593 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 HYPKQ9NX55 129 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 FRAT2O75474 233 aaPredicted RBP9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 FLIIQ13045 1269 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 SLC39A6Q13433 755 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 ZNF790Q6PG37 636 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 ZHX1Q9UKY1 873 aaPredicted RBP9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 ERVV-2B6SEH9 535 aa9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
SLC13A3-202ENST00000290317 ANP32BQ92688 251 aaKnown RBP9.5□□□□□ -0.89
SLC13A3-202ENST00000290317 STARD3NLO95772 234 aa9.5□□□□□ -0.89
SLC13A3-202ENST00000290317 OS9Q13438 667 aaPredicted RBP9.5□□□□□ -0.89
SLC13A3-202ENST00000290317 IPO4Q8TEX9 1081 aaKnown RBP9.5□□□□□ -0.89
SLC13A3-202ENST00000290317 SRCIN1Q9C0H9 1055 aa9.5□□□□□ -0.89
SLC13A3-202ENST00000290317 EIF4A1P60842 406 aaKnown RBP9.5□□□□□ -0.89
SLC13A3-202ENST00000290317 MYL6BP14649 208 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 JCADQ9P266 1359 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 PXDNQ92626 1479 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 UBTFL1P0CB47 393 aaPredicted RBP9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 BRPF1P55201 1214 aaPredicted RBP9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 SHPRHQ149N8 1683 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 STRCQ7RTU9 1775 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 NRKQ7Z2Y5 1582 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 MAP7D2Q96T17 732 aa9.49□□□□□ -0.89
SLC13A3-202ENST00000290317 USP21Q9UK80 565 aa9.48□□□□□ -0.89
SLC13A3-202ENST00000290317 GNAI2P04899 355 aa9.48□□□□□ -0.89
SLC13A3-202ENST00000290317 SLIT3O75094 1523 aa9.48□□□□□ -0.89
SLC13A3-202ENST00000290317 CHPF2Q9P2E5 772 aa9.48□□□□□ -0.89
SLC13A3-202ENST00000290317 CRB1P82279 1406 aa9.48□□□□□ -0.89
SLC13A3-202ENST00000290317 CYP27B1O15528 508 aa9.48□□□□□ -0.89
SLC13A3-202ENST00000290317 RLBP1P12271 317 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms