RNA–Protein interactions for RNA: ENST00000282077.7

PDK1-201, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 14,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-201ENST00000282077 DDX12PQ92771 950 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 CUL7Q14999 1698 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 LRP2BPQ9P2M1 347 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 ZSCAN30Q86W11 494 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 POLR3GO15318 223 aaPredicted RBP13.5□□□□□ -0.25
PDK1-201ENST00000282077 EHMT1Q9H9B1 1298 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 CCDC175P0C221 793 aa13.5□□□□□ -0.25
PDK1-201ENST00000282077 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
PDK1-201ENST00000282077 NEMFO60524 1076 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 BTBD11A6QL63 1104 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 EXOSC9Q06265 439 aaKnown RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 AIDAQ96BJ3 306 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 SREK1Q8WXA9 508 aaKnown RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 AKAP2Q9Y2D5 859 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 SYCE3A1L190 88 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 TOP1P11387 765 aaKnown RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 FERMT1Q9BQL6 677 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 DAPK1P53355 1430 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 MYL6BP14649 208 aa13.49□□□□□ -0.25
PDK1-201ENST00000282077 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
PDK1-201ENST00000282077 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
PDK1-201ENST00000282077 BACH2Q9BYV9 841 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 GOLGA6L9A6NEM1 432 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
PDK1-201ENST00000282077 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
PDK1-201ENST00000282077 PAFAH1B1P43034 410 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 NUP88Q99567 741 aaPredicted RBP13.48□□□□□ -0.25
PDK1-201ENST00000282077 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 KIF20AO95235 890 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 CETN1Q12798 172 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 ZSCAN29Q8IWY8 852 aaPredicted RBP13.48□□□□□ -0.25
PDK1-201ENST00000282077 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 GSDMDP57764 484 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 A0A087WZG4 1122 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
PDK1-201ENST00000282077 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 ZNF652Q9Y2D9 606 aa13.48□□□□□ -0.25
PDK1-201ENST00000282077 TMOD2Q9NZR1 351 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 PYM1Q9BRP8 204 aaKnown RBP13.47□□□□□ -0.25
PDK1-201ENST00000282077 USP5P45974 858 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 C6orf163Q5TEZ5 329 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 MCM4P33991 863 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDK1-201ENST00000282077 NKTRP30414 1462 aaKnown RBP13.47□□□□□ -0.25
PDK1-201ENST00000282077 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 FERP16591 822 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 CTR9Q6PD62 1173 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 CEP126Q9P2H0 1117 aa13.47□□□□□ -0.25
PDK1-201ENST00000282077 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
PDK1-201ENST00000282077 CTNNA2P26232 953 aa13.46□□□□□ -0.25
PDK1-201ENST00000282077 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
PDK1-201ENST00000282077 BCCIPQ9P287 314 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDK1-201ENST00000282077 DDX23Q9BUQ8 820 aaKnown RBP13.46□□□□□ -0.25
PDK1-201ENST00000282077 UBE4AQ14139 1066 aa13.46□□□□□ -0.25
PDK1-201ENST00000282077 FERMT2Q96AC1 680 aa13.46□□□□□ -0.25
PDK1-201ENST00000282077 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.26
PDK1-201ENST00000282077 YEATS4O95619 227 aa13.46□□□□□ -0.26
PDK1-201ENST00000282077 CUL5Q93034 780 aa13.46□□□□□ -0.26
PDK1-201ENST00000282077 CLIP2Q9UDT6 1046 aa13.46□□□□□ -0.26
PDK1-201ENST00000282077 EHBP1Q8NDI1 1231 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 CAMK4Q16566 473 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 RNF187Q5TA31 235 aaPredicted RBP13.45□□□□□ -0.26
PDK1-201ENST00000282077 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
PDK1-201ENST00000282077 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
PDK1-201ENST00000282077 PPP1R1BQ9UD71 204 aaPredicted RBP13.44□□□□□ -0.26
PDK1-201ENST00000282077 TOM1L2Q6ZVM7 507 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 TTC21AQ8NDW8 1320 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
PDK1-201ENST00000282077 STX1AQ16623 288 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 STARD3NLO95772 234 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 KIF1BPQ96EK5 621 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
PDK1-201ENST00000282077 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
PDK1-201ENST00000282077 AMPD3Q01432 767 aa13.43□□□□□ -0.26
PDK1-201ENST00000282077 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
PDK1-201ENST00000282077 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
PDK1-201ENST00000282077 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
PDK1-201ENST00000282077 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
PDK1-201ENST00000282077 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
PDK1-201ENST00000282077 BCAR3O75815 825 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms