RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 MCM10Q7L590 875 aa12.97□□□□□ -0.33
SEC24D-201ENST00000280551 PKNOX2Q96KN3 472 aa12.97□□□□□ -0.33
SEC24D-201ENST00000280551 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
SEC24D-201ENST00000280551 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
SEC24D-201ENST00000280551 DISP2A7MBM2 1401 aa12.96□□□□□ -0.33
SEC24D-201ENST00000280551 NBR1Q14596 966 aa12.96□□□□□ -0.33
SEC24D-201ENST00000280551 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
SEC24D-201ENST00000280551 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.33
SEC24D-201ENST00000280551 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
SEC24D-201ENST00000280551 KCPQ6ZWJ8 1503 aa12.96□□□□□ -0.34
SEC24D-201ENST00000280551 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
SEC24D-201ENST00000280551 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
SEC24D-201ENST00000280551 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
SEC24D-201ENST00000280551 TNS2Q63HR2 1409 aa12.94□□□□□ -0.34
SEC24D-201ENST00000280551 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
SEC24D-201ENST00000280551 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
SEC24D-201ENST00000280551 TJP1Q07157 1748 aa12.94□□□□□ -0.34
SEC24D-201ENST00000280551 FRAT1Q92837 279 aaPredicted RBP12.93□□□□□ -0.34
SEC24D-201ENST00000280551 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
SEC24D-201ENST00000280551 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
SEC24D-201ENST00000280551 PDE4AP27815 886 aa12.91□□□□□ -0.34
SEC24D-201ENST00000280551 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
SEC24D-201ENST00000280551 C14orf37Q86TY3 774 aa12.91□□□□□ -0.34
SEC24D-201ENST00000280551 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
SEC24D-201ENST00000280551 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
SEC24D-201ENST00000280551 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
SEC24D-201ENST00000280551 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
SEC24D-201ENST00000280551 WDR17Q8IZU2 1322 aa12.9□□□□□ -0.34
SEC24D-201ENST00000280551 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
SEC24D-201ENST00000280551 FTSJ3Q8IY81 847 aaKnown RBP12.9□□□□□ -0.34
SEC24D-201ENST00000280551 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
SEC24D-201ENST00000280551 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.35
SEC24D-201ENST00000280551 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
SEC24D-201ENST00000280551 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
SEC24D-201ENST00000280551 NUCB1Q02818 461 aa12.89□□□□□ -0.35
SEC24D-201ENST00000280551 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
SEC24D-201ENST00000280551 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
SEC24D-201ENST00000280551 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
SEC24D-201ENST00000280551 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
SEC24D-201ENST00000280551 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
SEC24D-201ENST00000280551 GCC1Q96CN9 775 aa12.87□□□□□ -0.35
SEC24D-201ENST00000280551 SOX12O15370 315 aa12.87□□□□□ -0.35
SEC24D-201ENST00000280551 COL15A1P39059 1388 aa12.87□□□□□ -0.35
SEC24D-201ENST00000280551 PHKG2P15735 406 aa12.87□□□□□ -0.35
SEC24D-201ENST00000280551 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
SEC24D-201ENST00000280551 DDX17Q92841 729 aaKnown RBP12.86□□□□□ -0.35
SEC24D-201ENST00000280551 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
SEC24D-201ENST00000280551 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
SEC24D-201ENST00000280551 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
SEC24D-201ENST00000280551 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
SEC24D-201ENST00000280551 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
SEC24D-201ENST00000280551 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
SEC24D-201ENST00000280551 LRP10Q7Z4F1 713 aa12.85□□□□□ -0.35
SEC24D-201ENST00000280551 ANKRD44Q8N8A2 993 aa12.85□□□□□ -0.35
SEC24D-201ENST00000280551 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
SEC24D-201ENST00000280551 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
SEC24D-201ENST00000280551 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
SEC24D-201ENST00000280551 UTYO14607 1347 aa12.84□□□□□ -0.35
SEC24D-201ENST00000280551 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
SEC24D-201ENST00000280551 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
SEC24D-201ENST00000280551 ADCY9O60503 1353 aa12.84□□□□□ -0.35
SEC24D-201ENST00000280551 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
SEC24D-201ENST00000280551 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
SEC24D-201ENST00000280551 G2E3Q7L622 706 aa12.83□□□□□ -0.36
SEC24D-201ENST00000280551 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
SEC24D-201ENST00000280551 SLIT2O94813 1529 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 AK9Q5TCS8 1911 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 DAXXQ9UER7 740 aaPredicted RBP12.82□□□□□ -0.36
SEC24D-201ENST00000280551 LAMB2P55268 1798 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 SALL3Q9BXA9 1300 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 CYP27B1O15528 508 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 FLIIQ13045 1269 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 CEP85Q6P2H3 762 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
SEC24D-201ENST00000280551 PDIA6Q15084 440 aa12.81□□□□□ -0.36
SEC24D-201ENST00000280551 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
SEC24D-201ENST00000280551 BCORQ6W2J9 1755 aa12.81□□□□□ -0.36
SEC24D-201ENST00000280551 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
SEC24D-201ENST00000280551 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
SEC24D-201ENST00000280551 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
SEC24D-201ENST00000280551 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
SEC24D-201ENST00000280551 ZC3H6P61129 1189 aaKnown RBP12.79□□□□□ -0.36
SEC24D-201ENST00000280551 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
SEC24D-201ENST00000280551 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
SEC24D-201ENST00000280551 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
SEC24D-201ENST00000280551 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
SEC24D-201ENST00000280551 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
SEC24D-201ENST00000280551 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 MTX1Q13505 466 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 DEKP35659 375 aaKnown RBP12.78□□□□□ -0.36
SEC24D-201ENST00000280551 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 KCNQ3O43525 872 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
SEC24D-201ENST00000280551 POLA2Q14181 598 aa12.77□□□□□ -0.36
SEC24D-201ENST00000280551 BMP2KLQ5H9B9 411 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms