RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 PXDNQ92626 1479 aa22.45■■□□□ 1.18
CAPN1-201ENST00000279247 C16orf71Q8IYS4 520 aaPredicted RBP22.44■■□□□ 1.18
CAPN1-201ENST00000279247 USP54Q70EL1 1684 aa22.44■■□□□ 1.18
CAPN1-201ENST00000279247 PIP4K2BP78356 416 aa22.44■■□□□ 1.18
CAPN1-201ENST00000279247 CEP85Q6P2H3 762 aa22.43■■□□□ 1.18
CAPN1-201ENST00000279247 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
CAPN1-201ENST00000279247 PRAMEF22A3QJZ6 481 aa22.43■■□□□ 1.18
CAPN1-201ENST00000279247 CHPF2Q9P2E5 772 aa22.43■■□□□ 1.18
CAPN1-201ENST00000279247 RGPD5Q99666 1765 aa22.43■■□□□ 1.18
CAPN1-201ENST00000279247 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
CAPN1-201ENST00000279247 MED1Q15648 1581 aaPredicted RBP22.42■■□□□ 1.18
CAPN1-201ENST00000279247 EIF4A1P60842 406 aaKnown RBP22.42■■□□□ 1.18
CAPN1-201ENST00000279247 AMOTQ4VCS5 1084 aa22.42■■□□□ 1.18
CAPN1-201ENST00000279247 SLC39A6Q13433 755 aa22.41■■□□□ 1.18
CAPN1-201ENST00000279247 ANKRD44Q8N8A2 993 aa22.4■■□□□ 1.18
CAPN1-201ENST00000279247 OTUD7AQ8TE49 926 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-201ENST00000279247 TNS3Q68CZ2 1445 aa22.4■■□□□ 1.18
CAPN1-201ENST00000279247 CEMIPQ8WUJ3 1361 aa22.39■■□□□ 1.18
CAPN1-201ENST00000279247 CCT4P50991 539 aaKnown RBP22.39■■□□□ 1.18
CAPN1-201ENST00000279247 SLIT3O75094 1523 aa22.39■■□□□ 1.17
CAPN1-201ENST00000279247 KIF1AQ12756 1690 aa22.39■■□□□ 1.17
CAPN1-201ENST00000279247 EXOC6BQ9Y2D4 811 aa22.38■■□□□ 1.17
CAPN1-201ENST00000279247 SPRYD3Q8NCJ5 442 aa22.37■■□□□ 1.17
CAPN1-201ENST00000279247 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
CAPN1-201ENST00000279247 RPAP2Q8IXW5 612 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-201ENST00000279247 TATP17735 454 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-201ENST00000279247 PRDM11Q9NQV5 511 aa22.36■■□□□ 1.17
CAPN1-201ENST00000279247 SOS2Q07890 1332 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-201ENST00000279247 ATP10DQ9P241 1426 aa22.36■■□□□ 1.17
CAPN1-201ENST00000279247 GNAI2P04899 355 aa22.35■■□□□ 1.17
CAPN1-201ENST00000279247 USP35Q9P2H5 1018 aa22.35■■□□□ 1.17
CAPN1-201ENST00000279247 VIRMAQ69YN4 1812 aaKnown RBP22.35■■□□□ 1.17
CAPN1-201ENST00000279247 PI4KAP2A4QPH2 592 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 PI4KAP1Q8N8J0 262 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 TBC1D32Q96NH3 1257 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 LRRFIP2Q9Y608 721 aaKnown RBP22.34■■□□□ 1.17
CAPN1-201ENST00000279247 ALS2Q96Q42 1657 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 AIMP1Q12904 312 aaKnown RBP22.34■■□□□ 1.17
CAPN1-201ENST00000279247 PROSER3Q2NL68 480 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 NFATC2IPQ8NCF5 419 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 C22orf23Q9BZE7 217 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 STRN4Q9NRL3 753 aa22.34■■□□□ 1.17
CAPN1-201ENST00000279247 SLKQ9H2G2 1235 aaPredicted RBP22.33■■□□□ 1.17
CAPN1-201ENST00000279247 PNMA6EA0A0J9YXQ4 647 aa22.33■■□□□ 1.16
CAPN1-201ENST00000279247 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-201ENST00000279247 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-201ENST00000279247 TSHZ3Q63HK5 1081 aa22.32■■□□□ 1.16
CAPN1-201ENST00000279247 BABAM1Q9NWV8 329 aa22.32■■□□□ 1.16
CAPN1-201ENST00000279247 HMMRO75330 724 aa22.31■■□□□ 1.16
CAPN1-201ENST00000279247 PLEKHM2Q8IWE5 1019 aa22.31■■□□□ 1.16
CAPN1-201ENST00000279247 UBTFL1P0CB47 393 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-201ENST00000279247 TOM1L2Q6ZVM7 507 aa22.31■■□□□ 1.16
CAPN1-201ENST00000279247 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
CAPN1-201ENST00000279247 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
CAPN1-201ENST00000279247 USP44Q9H0E7 712 aa22.29■■□□□ 1.16
CAPN1-201ENST00000279247 GIGYF1O75420 1035 aaPredicted RBP22.29■■□□□ 1.16
CAPN1-201ENST00000279247 GNAI3P08754 354 aa22.29■■□□□ 1.16
CAPN1-201ENST00000279247 GSPT1P15170 499 aaKnown RBP22.29■■□□□ 1.16
CAPN1-201ENST00000279247 MYL6BP14649 208 aa22.28■■□□□ 1.16
CAPN1-201ENST00000279247 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
CAPN1-201ENST00000279247 SPG7Q9UQ90 795 aa22.28■■□□□ 1.16
CAPN1-201ENST00000279247 MEGF6O75095 1541 aa22.28■■□□□ 1.16
CAPN1-201ENST00000279247 PHKG2P15735 406 aa22.28■■□□□ 1.16
CAPN1-201ENST00000279247 TBC1D9Q6ZT07 1266 aa22.28■■□□□ 1.16
CAPN1-201ENST00000279247 FAM208AQ9UK61 1670 aaKnown RBP22.27■■□□□ 1.16
CAPN1-201ENST00000279247 DNAAF4Q8WXU2 420 aa22.27■■□□□ 1.16
CAPN1-201ENST00000279247 NBPF7P0C2Y1 421 aaPredicted RBP22.27■■□□□ 1.16
CAPN1-201ENST00000279247 CYP27B1O15528 508 aa22.26■■□□□ 1.15
CAPN1-201ENST00000279247 BECN1Q14457 450 aa22.26■■□□□ 1.15
CAPN1-201ENST00000279247 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
CAPN1-201ENST00000279247 IFNL2Q8IZJ0 200 aa22.25■■□□□ 1.15
CAPN1-201ENST00000279247 DBF4Q9UBU7 674 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-201ENST00000279247 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
CAPN1-201ENST00000279247 NUTM2BA6NNL0 878 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-201ENST00000279247 NUTM2EB1AL46 878 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-201ENST00000279247 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
CAPN1-201ENST00000279247 NUTM2AQ8IVF1 878 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-201ENST00000279247 IL1RAPL2Q9NP60 686 aa22.25■■□□□ 1.15
CAPN1-201ENST00000279247 MAP3K2Q9Y2U5 619 aa22.25■■□□□ 1.15
CAPN1-201ENST00000279247 DDX54Q8TDD1 881 aaKnown RBP22.24■■□□□ 1.15
CAPN1-201ENST00000279247 SLC52A2Q9HAB3 445 aa22.24■■□□□ 1.15
CAPN1-201ENST00000279247 CWF19L2Q2TBE0 894 aaKnown RBP22.23■■□□□ 1.15
CAPN1-201ENST00000279247 TBC1D2Q9BYX2 928 aa22.23■■□□□ 1.15
CAPN1-201ENST00000279247 LARP1Q6PKG0 1096 aaKnown RBP22.23■■□□□ 1.15
CAPN1-201ENST00000279247 LTBP4Q8N2S1 1624 aa22.23■■□□□ 1.15
CAPN1-201ENST00000279247 ZNF496Q96IT1 587 aaPredicted RBP22.23■■□□□ 1.15
CAPN1-201ENST00000279247 EVA1CP58658 441 aa22.22■■□□□ 1.15
CAPN1-201ENST00000279247 TTC22Q5TAA0 569 aa22.22■■□□□ 1.15
CAPN1-201ENST00000279247 SOS1Q07889 1333 aaPredicted RBP22.22■■□□□ 1.15
CAPN1-201ENST00000279247 UBAP1LF5GYI3 381 aa22.22■■□□□ 1.15
CAPN1-201ENST00000279247 LMO7Q8WWI1 1683 aa22.21■■□□□ 1.15
CAPN1-201ENST00000279247 PPP1R42Q7Z4L9 355 aa22.21■■□□□ 1.15
CAPN1-201ENST00000279247 TTC5Q8N0Z6 440 aa22.21■■□□□ 1.15
CAPN1-201ENST00000279247 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
CAPN1-201ENST00000279247 ATP8B2P98198 1209 aa22.21■■□□□ 1.15
CAPN1-201ENST00000279247 NCAPD2Q15021 1401 aa22.2■■□□□ 1.15
CAPN1-201ENST00000279247 SRGAP3O43295 1099 aa22.2■■□□□ 1.15
CAPN1-201ENST00000279247 C9orf78Q9NZ63 289 aaPredicted RBP22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms