RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 NUP160Q12769 1436 aa13.36□□□□□ -0.27
USP6NL-201ENST00000277575 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
USP6NL-201ENST00000277575 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
USP6NL-201ENST00000277575 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
USP6NL-201ENST00000277575 OFD1O75665 1012 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 IMMTQ16891 758 aaKnown RBP13.35□□□□□ -0.27
USP6NL-201ENST00000277575 CDK5RAP3Q96JB5 506 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 TESK2Q96S53 571 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
USP6NL-201ENST00000277575 GPTP24298 496 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
USP6NL-201ENST00000277575 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 ANXA1P04083 346 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
USP6NL-201ENST00000277575 ADAMTS12P58397 1594 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
USP6NL-201ENST00000277575 CDKL5O76039 1030 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
USP6NL-201ENST00000277575 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
USP6NL-201ENST00000277575 MAP3K2Q9Y2U5 619 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 PDILTQ8N807 584 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 TSPY26PQ9H489 355 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 MSH6P52701 1360 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 CAVIN4Q5BKX8 364 aa13.34□□□□□ -0.27
USP6NL-201ENST00000277575 PRPF40BQ6NWY9 871 aaKnown RBP13.33□□□□□ -0.27
USP6NL-201ENST00000277575 POLKQ9UBT6 870 aa13.33□□□□□ -0.27
USP6NL-201ENST00000277575 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
USP6NL-201ENST00000277575 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
USP6NL-201ENST00000277575 SOGA3Q5TF21 947 aa13.33□□□□□ -0.28
USP6NL-201ENST00000277575 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
USP6NL-201ENST00000277575 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
USP6NL-201ENST00000277575 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
USP6NL-201ENST00000277575 EPS15P42566 896 aa13.33□□□□□ -0.28
USP6NL-201ENST00000277575 R3HCC1Q9Y3T6 440 aaKnown RBP13.33□□□□□ -0.28
USP6NL-201ENST00000277575 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
USP6NL-201ENST00000277575 NAP1L1P55209 391 aaKnown RBP13.32□□□□□ -0.28
USP6NL-201ENST00000277575 PRM3Q9NNZ6 103 aa13.32□□□□□ -0.28
USP6NL-201ENST00000277575 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
USP6NL-201ENST00000277575 WDR62O43379 1518 aa13.32□□□□□ -0.28
USP6NL-201ENST00000277575 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
USP6NL-201ENST00000277575 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
USP6NL-201ENST00000277575 PPP1R42Q7Z4L9 355 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 SMC2O95347 1197 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
USP6NL-201ENST00000277575 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 ASXL1Q8IXJ9 1541 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 KRT18P05783 430 aaKnown RBP13.31□□□□□ -0.28
USP6NL-201ENST00000277575 CCDC192P0DO97 292 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 MCM4P33991 863 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
USP6NL-201ENST00000277575 TNMDQ9H2S6 317 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 MAP3K12Q12852 859 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 LDHAL6AQ6ZMR3 332 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
USP6NL-201ENST00000277575 NOL7Q9UMY1 257 aaKnown RBP13.31□□□□□ -0.28
USP6NL-201ENST00000277575 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
USP6NL-201ENST00000277575 GPS2Q13227 327 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-201ENST00000277575 SPATA32Q96LK8 384 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 NAPBQ9H115 298 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 CWC25Q9NXE8 425 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-201ENST00000277575 FERMT3Q86UX7 667 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 ANKIB1Q9P2G1 1089 aa13.3□□□□□ -0.28
USP6NL-201ENST00000277575 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
USP6NL-201ENST00000277575 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 HSP90AA2PQ14568 343 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-201ENST00000277575 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 SLC5A1P13866 664 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 KCNA6P17658 529 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 CT47A1Q5JQC4 288 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-201ENST00000277575 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 MNS1Q8NEH6 495 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 ABCC2Q92887 1545 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 PARD3Q8TEW0 1356 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 BRPF1P55201 1214 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-201ENST00000277575 CARD14Q9BXL6 1004 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
USP6NL-201ENST00000277575 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
USP6NL-201ENST00000277575 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
USP6NL-201ENST00000277575 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
USP6NL-201ENST00000277575 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
USP6NL-201ENST00000277575 USP5P45974 858 aa13.28□□□□□ -0.28
USP6NL-201ENST00000277575 BMP2KLQ5H9B9 411 aa13.28□□□□□ -0.28
USP6NL-201ENST00000277575 C8orf58Q8NAV2 365 aa13.28□□□□□ -0.28
USP6NL-201ENST00000277575 MEIS3Q99687 375 aa13.28□□□□□ -0.28
USP6NL-201ENST00000277575 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms