RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
C9orf3-201ENST00000277198 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
C9orf3-201ENST00000277198 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
C9orf3-201ENST00000277198 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
C9orf3-201ENST00000277198 TMEM57Q8N5G2 664 aa16.23■□□□□ 0.19
C9orf3-201ENST00000277198 ERBB3P21860 1342 aa16.23■□□□□ 0.19
C9orf3-201ENST00000277198 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
C9orf3-201ENST00000277198 DEFB132Q7Z7B7 95 aa16.22■□□□□ 0.19
C9orf3-201ENST00000277198 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-201ENST00000277198 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
C9orf3-201ENST00000277198 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
C9orf3-201ENST00000277198 PRKAR2BP31323 418 aa16.21■□□□□ 0.19
C9orf3-201ENST00000277198 NUCB1Q02818 461 aa16.21■□□□□ 0.19
C9orf3-201ENST00000277198 C22orf23Q9BZE7 217 aa16.21■□□□□ 0.19
C9orf3-201ENST00000277198 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
C9orf3-201ENST00000277198 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
C9orf3-201ENST00000277198 CARD10Q9BWT7 1032 aa16.2■□□□□ 0.18
C9orf3-201ENST00000277198 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
C9orf3-201ENST00000277198 ABCC6O95255 1503 aa16.2■□□□□ 0.18
C9orf3-201ENST00000277198 GNAI1P63096 354 aa16.2■□□□□ 0.18
C9orf3-201ENST00000277198 IP6K1Q92551 441 aa16.2■□□□□ 0.18
C9orf3-201ENST00000277198 HOXC9P31274 260 aa16.19■□□□□ 0.18
C9orf3-201ENST00000277198 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
C9orf3-201ENST00000277198 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
C9orf3-201ENST00000277198 DISP2A7MBM2 1401 aa16.18■□□□□ 0.18
C9orf3-201ENST00000277198 IL27Q8NEV9 243 aa16.18■□□□□ 0.18
C9orf3-201ENST00000277198 GCC1Q96CN9 775 aa16.18■□□□□ 0.18
C9orf3-201ENST00000277198 ZNF853P0CG23 659 aa16.18■□□□□ 0.18
C9orf3-201ENST00000277198 IL13P35225 146 aa16.18■□□□□ 0.18
C9orf3-201ENST00000277198 PEAK1Q9H792 1746 aa16.18■□□□□ 0.18
C9orf3-201ENST00000277198 PARP4Q9UKK3 1724 aaKnown RBP16.18■□□□□ 0.18
C9orf3-201ENST00000277198 VAMP4O75379 141 aa16.17■□□□□ 0.18
C9orf3-201ENST00000277198 AMPHP49418 695 aa16.17■□□□□ 0.18
C9orf3-201ENST00000277198 EMILIN1Q9Y6C2 1016 aa16.17■□□□□ 0.18
C9orf3-201ENST00000277198 TRIM37O94972 964 aa16.17■□□□□ 0.18
C9orf3-201ENST00000277198 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-201ENST00000277198 WNK3Q9BYP7 1800 aa16.16■□□□□ 0.18
C9orf3-201ENST00000277198 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-201ENST00000277198 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
C9orf3-201ENST00000277198 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
C9orf3-201ENST00000277198 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
C9orf3-201ENST00000277198 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
C9orf3-201ENST00000277198 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
C9orf3-201ENST00000277198 DDB1Q16531 1140 aa16.15■□□□□ 0.18
C9orf3-201ENST00000277198 HSP90AB2PQ58FF8 381 aa16.15■□□□□ 0.18
C9orf3-201ENST00000277198 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
C9orf3-201ENST00000277198 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
C9orf3-201ENST00000277198 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
C9orf3-201ENST00000277198 MARCH10Q8NA82 808 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-201ENST00000277198 CHMP5Q9NZZ3 219 aa16.15■□□□□ 0.18
C9orf3-201ENST00000277198 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
C9orf3-201ENST00000277198 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.17
C9orf3-201ENST00000277198 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
C9orf3-201ENST00000277198 ABCC4O15439 1325 aa16.13■□□□□ 0.17
C9orf3-201ENST00000277198 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
C9orf3-201ENST00000277198 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
C9orf3-201ENST00000277198 SNX21Q969T3 373 aa16.13■□□□□ 0.17
C9orf3-201ENST00000277198 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
C9orf3-201ENST00000277198 EN1Q05925 392 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-201ENST00000277198 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
C9orf3-201ENST00000277198 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
C9orf3-201ENST00000277198 L1TD1Q5T7N2 865 aaKnown RBP16.12■□□□□ 0.17
C9orf3-201ENST00000277198 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
C9orf3-201ENST00000277198 RTL1A6NKG5 1358 aa16.11■□□□□ 0.17
C9orf3-201ENST00000277198 NBPF6Q5VWK0 638 aa16.11■□□□□ 0.17
C9orf3-201ENST00000277198 HSCBQ8IWL3 235 aa16.11■□□□□ 0.17
C9orf3-201ENST00000277198 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
C9orf3-201ENST00000277198 BRPF3Q9ULD4 1205 aa16.11■□□□□ 0.17
C9orf3-201ENST00000277198 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
C9orf3-201ENST00000277198 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
C9orf3-201ENST00000277198 HMOX1P09601 288 aa16.1■□□□□ 0.17
C9orf3-201ENST00000277198 IL2RBP14784 551 aa16.1■□□□□ 0.17
C9orf3-201ENST00000277198 FAM208AQ9UK61 1670 aaKnown RBP16.1■□□□□ 0.17
C9orf3-201ENST00000277198 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
C9orf3-201ENST00000277198 FLT4P35916 1363 aa16.1■□□□□ 0.17
C9orf3-201ENST00000277198 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-201ENST00000277198 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
C9orf3-201ENST00000277198 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
C9orf3-201ENST00000277198 MCM4P33991 863 aa16.09■□□□□ 0.17
C9orf3-201ENST00000277198 CDCA7Q9BWT1 371 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-201ENST00000277198 RGPD1P0DJD0 1748 aa16.09■□□□□ 0.17
C9orf3-201ENST00000277198 MEGF6O75095 1541 aa16.08■□□□□ 0.17
C9orf3-201ENST00000277198 EXOC5O00471 708 aa16.08■□□□□ 0.16
C9orf3-201ENST00000277198 BAG6P46379 1132 aa16.08■□□□□ 0.16
C9orf3-201ENST00000277198 EZH2Q15910 746 aaKnown RBP16.08■□□□□ 0.16
C9orf3-201ENST00000277198 APBA3O96018 575 aa16.07■□□□□ 0.16
C9orf3-201ENST00000277198 TSPYL6Q8N831 410 aa16.07■□□□□ 0.16
C9orf3-201ENST00000277198 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-201ENST00000277198 ANKRD45Q5TZF3 282 aa16.06■□□□□ 0.16
C9orf3-201ENST00000277198 DDIT3P35638 169 aa16.06■□□□□ 0.16
C9orf3-201ENST00000277198 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
C9orf3-201ENST00000277198 KCNQ2O43526 872 aa16.05■□□□□ 0.16
C9orf3-201ENST00000277198 ACSBG1Q96GR2 724 aa16.05■□□□□ 0.16
C9orf3-201ENST00000277198 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
C9orf3-201ENST00000277198 THUMPD2Q9BTF0 503 aaKnown RBP16.05■□□□□ 0.16
C9orf3-201ENST00000277198 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
C9orf3-201ENST00000277198 INTS3Q68E01 1043 aaKnown RBP16.04■□□□□ 0.16
C9orf3-201ENST00000277198 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
C9orf3-201ENST00000277198 DDX54Q8TDD1 881 aaKnown RBP16.04■□□□□ 0.16
C9orf3-201ENST00000277198 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms