RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 DDX11L8A8MPP1 907 aa23.53■■□□□ 1.36
CPNE7-201ENST00000268720 K7ELQ4 463 aaPredicted RBP23.53■■□□□ 1.36
CPNE7-201ENST00000268720 HTATSF1O43719 755 aaKnown RBP23.53■■□□□ 1.36
CPNE7-201ENST00000268720 STK31Q9BXU1 1019 aa23.53■■□□□ 1.36
CPNE7-201ENST00000268720 FLIIQ13045 1269 aa23.53■■□□□ 1.36
CPNE7-201ENST00000268720 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
CPNE7-201ENST00000268720 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.36
CPNE7-201ENST00000268720 FKBP5Q13451 457 aaPredicted RBP23.52■■□□□ 1.36
CPNE7-201ENST00000268720 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
CPNE7-201ENST00000268720 FOXD4L6Q3SYB3 417 aaPredicted RBP23.52■■□□□ 1.36
CPNE7-201ENST00000268720 NBPF6Q5VWK0 638 aa23.52■■□□□ 1.36
CPNE7-201ENST00000268720 FOXD4L3Q6VB84 417 aaPredicted RBP23.52■■□□□ 1.36
CPNE7-201ENST00000268720 ZGPATQ8N5A5 531 aaKnown RBP23.52■■□□□ 1.36
CPNE7-201ENST00000268720 NBPF4Q96M43 638 aa23.52■■□□□ 1.36
CPNE7-201ENST00000268720 NCLP19338 710 aaKnown RBP23.51■■□□□ 1.35
CPNE7-201ENST00000268720 CCT4P50991 539 aaKnown RBP23.5■■□□□ 1.35
CPNE7-201ENST00000268720 XPCQ01831 940 aaPredicted RBP23.5■■□□□ 1.35
CPNE7-201ENST00000268720 GRPEL1Q9HAV7 217 aa23.5■■□□□ 1.35
CPNE7-201ENST00000268720 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
CPNE7-201ENST00000268720 LRRC37A3O60309 1634 aa23.49■■□□□ 1.35
CPNE7-201ENST00000268720 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
CPNE7-201ENST00000268720 PSME1Q06323 249 aa23.49■■□□□ 1.35
CPNE7-201ENST00000268720 CCDC30Q5VVM6 783 aa23.49■■□□□ 1.35
CPNE7-201ENST00000268720 RAB3GAP1Q15042 981 aa23.48■■□□□ 1.35
CPNE7-201ENST00000268720 IP6K1Q92551 441 aa23.48■■□□□ 1.35
CPNE7-201ENST00000268720 MAP4K4O95819 1239 aaPredicted RBP23.47■■□□□ 1.35
CPNE7-201ENST00000268720 MRE11P49959 708 aa23.47■■□□□ 1.35
CPNE7-201ENST00000268720 LRRC59Q96AG4 307 aaKnown RBP23.47■■□□□ 1.35
CPNE7-201ENST00000268720 LGR6Q9HBX8 967 aa23.47■■□□□ 1.35
CPNE7-201ENST00000268720 ORAI2Q96SN7 254 aa23.46■■□□□ 1.35
CPNE7-201ENST00000268720 LTN1O94822 1766 aa23.46■■□□□ 1.35
CPNE7-201ENST00000268720 GNAI2P04899 355 aa23.46■■□□□ 1.35
CPNE7-201ENST00000268720 MCTP1Q6DN14 999 aa23.46■■□□□ 1.35
CPNE7-201ENST00000268720 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
CPNE7-201ENST00000268720 PNMA6EA0A0J9YXQ4 647 aa23.45■■□□□ 1.34
CPNE7-201ENST00000268720 USP54Q70EL1 1684 aa23.45■■□□□ 1.34
CPNE7-201ENST00000268720 HMMRO75330 724 aa23.45■■□□□ 1.34
CPNE7-201ENST00000268720 GBP4Q96PP9 640 aa23.45■■□□□ 1.34
CPNE7-201ENST00000268720 ANXA1P04083 346 aa23.44■■□□□ 1.34
CPNE7-201ENST00000268720 USP26Q9BXU7 913 aa23.44■■□□□ 1.34
CPNE7-201ENST00000268720 IL1RAPL2Q9NP60 686 aa23.43■■□□□ 1.34
CPNE7-201ENST00000268720 NFAT5O94916 1531 aa23.43■■□□□ 1.34
CPNE7-201ENST00000268720 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
CPNE7-201ENST00000268720 HDGFL1Q5TGJ6 251 aa23.42■■□□□ 1.34
CPNE7-201ENST00000268720 RILPL2Q969X0 211 aa23.42■■□□□ 1.34
CPNE7-201ENST00000268720 KCNQ3O43525 872 aa23.42■■□□□ 1.34
CPNE7-201ENST00000268720 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
CPNE7-201ENST00000268720 CIZ1Q9ULV3 898 aaPredicted RBP23.42■■□□□ 1.34
CPNE7-201ENST00000268720 ERBB4Q15303 1308 aa23.41■■□□□ 1.34
CPNE7-201ENST00000268720 EIF2S2P20042 333 aaKnown RBP23.41■■□□□ 1.34
CPNE7-201ENST00000268720 LARP6Q9BRS8 491 aaKnown RBP23.41■■□□□ 1.34
CPNE7-201ENST00000268720 LMOD2Q6P5Q4 547 aa23.4■■□□□ 1.34
CPNE7-201ENST00000268720 LRRFIP2Q9Y608 721 aaKnown RBP23.4■■□□□ 1.34
CPNE7-201ENST00000268720 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
CPNE7-201ENST00000268720 PDE1AP54750 535 aa23.4■■□□□ 1.34
CPNE7-201ENST00000268720 USP44Q9H0E7 712 aa23.4■■□□□ 1.34
CPNE7-201ENST00000268720 RBM27Q9P2N5 1060 aaKnown RBP23.4■■□□□ 1.34
CPNE7-201ENST00000268720 DDX49Q9Y6V7 483 aaKnown RBP23.4■■□□□ 1.34
CPNE7-201ENST00000268720 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.34
CPNE7-201ENST00000268720 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.33
CPNE7-201ENST00000268720 NAP1L5Q96NT1 182 aaPredicted RBP23.39■■□□□ 1.33
CPNE7-201ENST00000268720 BAG4O95429 457 aaKnown RBP23.38■■□□□ 1.33
CPNE7-201ENST00000268720 GCP02774 474 aa23.38■■□□□ 1.33
CPNE7-201ENST00000268720 GNAI3P08754 354 aa23.38■■□□□ 1.33
CPNE7-201ENST00000268720 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
CPNE7-201ENST00000268720 PALD1Q9ULE6 856 aa23.37■■□□□ 1.33
CPNE7-201ENST00000268720 RGPD2P0DJD1 1756 aa23.37■■□□□ 1.33
CPNE7-201ENST00000268720 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
CPNE7-201ENST00000268720 IL25Q9H293 177 aa23.37■■□□□ 1.33
CPNE7-201ENST00000268720 BABAM1Q9NWV8 329 aa23.37■■□□□ 1.33
CPNE7-201ENST00000268720 CAVIN1Q6NZI2 390 aaKnown RBP23.36■■□□□ 1.33
CPNE7-201ENST00000268720 KCNH5Q8NCM2 988 aa23.36■■□□□ 1.33
CPNE7-201ENST00000268720 ATP8B2P98198 1209 aa23.36■■□□□ 1.33
CPNE7-201ENST00000268720 NUTM1Q86Y26 1132 aa23.36■■□□□ 1.33
CPNE7-201ENST00000268720 UPF3BQ9BZI7 483 aaKnown RBP23.36■■□□□ 1.33
CPNE7-201ENST00000268720 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
CPNE7-201ENST00000268720 LRRCC1Q9C099 1032 aa23.35■■□□□ 1.33
CPNE7-201ENST00000268720 OSBPL3Q9H4L5 887 aa23.35■■□□□ 1.33
CPNE7-201ENST00000268720 CHPF2Q9P2E5 772 aa23.35■■□□□ 1.33
CPNE7-201ENST00000268720 SALL3Q9BXA9 1300 aa23.34■■□□□ 1.33
CPNE7-201ENST00000268720 CLCN1P35523 988 aa23.34■■□□□ 1.33
CPNE7-201ENST00000268720 ARHGEF25Q86VW2 580 aa23.34■■□□□ 1.33
CPNE7-201ENST00000268720 ZNF142P52746 1687 aaPredicted RBP23.33■■□□□ 1.33
CPNE7-201ENST00000268720 NEK4P51957 841 aa23.33■■□□□ 1.33
CPNE7-201ENST00000268720 AXIN2Q9Y2T1 843 aa23.33■■□□□ 1.33
CPNE7-201ENST00000268720 NPHP4O75161 1426 aaPredicted RBP23.33■■□□□ 1.32
CPNE7-201ENST00000268720 PRPF40AO75400 957 aaKnown RBP23.33■■□□□ 1.32
CPNE7-201ENST00000268720 ANO2Q9NQ90 1003 aa23.33■■□□□ 1.32
CPNE7-201ENST00000268720 NSFL1CQ9UNZ2 370 aaKnown RBP23.33■■□□□ 1.32
CPNE7-201ENST00000268720 SOS1Q07889 1333 aaPredicted RBP23.32■■□□□ 1.32
CPNE7-201ENST00000268720 UBTFL1P0CB47 393 aaPredicted RBP23.32■■□□□ 1.32
CPNE7-201ENST00000268720 TEFQ10587 303 aa23.31■■□□□ 1.32
CPNE7-201ENST00000268720 RABEP1Q15276 862 aa23.31■■□□□ 1.32
CPNE7-201ENST00000268720 CASC1Q6TDU7 716 aa23.31■■□□□ 1.32
CPNE7-201ENST00000268720 IBTKQ9P2D0 1353 aaPredicted RBP23.31■■□□□ 1.32
CPNE7-201ENST00000268720 BTBD11A6QL63 1104 aa23.31■■□□□ 1.32
CPNE7-201ENST00000268720 SKOR2Q2VWA4 1001 aaPredicted RBP23.31■■□□□ 1.32
CPNE7-201ENST00000268720 PXDNQ92626 1479 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 ESPNB1AK53 854 aa23.3■■□□□ 1.32
CPNE7-201ENST00000268720 NBPF7P0C2Y1 421 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms