RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.53
TIMP3-201ENST00000266085 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.52
TIMP3-201ENST00000266085 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.52
TIMP3-201ENST00000266085 PER1O15534 1290 aaPredicted RBP18.33■□□□□ 0.52
TIMP3-201ENST00000266085 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.52
TIMP3-201ENST00000266085 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
TIMP3-201ENST00000266085 IFIT5Q13325 482 aaKnown RBP18.32■□□□□ 0.52
TIMP3-201ENST00000266085 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
TIMP3-201ENST00000266085 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
TIMP3-201ENST00000266085 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
TIMP3-201ENST00000266085 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
TIMP3-201ENST00000266085 ZNF592Q92610 1267 aa18.32■□□□□ 0.52
TIMP3-201ENST00000266085 NPATQ14207 1427 aa18.32■□□□□ 0.52
TIMP3-201ENST00000266085 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
TIMP3-201ENST00000266085 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
TIMP3-201ENST00000266085 KAT6BQ8WYB5 2073 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 ARHGEF12Q9NZN5 1544 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 PDE4CQ08493 712 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 KRT32Q14532 448 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 HSP90AB3PQ58FF7 597 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 GOLGA6L1Q8N7Z2 621 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
TIMP3-201ENST00000266085 LRRC59Q96AG4 307 aaKnown RBP18.31■□□□□ 0.52
TIMP3-201ENST00000266085 ZNF396Q96N95 335 aaPredicted RBP18.31■□□□□ 0.52
TIMP3-201ENST00000266085 AKAP2Q9Y2D5 859 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 ATP7AQ04656 1500 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 STK38Q15208 465 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 ATP10AO60312 1499 aa18.31■□□□□ 0.52
TIMP3-201ENST00000266085 TDO2P48775 406 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 LETM1O95202 739 aaPredicted RBP18.3■□□□□ 0.52
TIMP3-201ENST00000266085 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 GCP02774 474 aa18.3■□□□□ 0.52
TIMP3-201ENST00000266085 CEBPZQ03701 1054 aaKnown RBP18.3■□□□□ 0.52
TIMP3-201ENST00000266085 LARP1BQ659C4 914 aaKnown RBP18.3■□□□□ 0.52
TIMP3-201ENST00000266085 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
TIMP3-201ENST00000266085 ZCRB1Q8TBF4 217 aaKnown RBP18.29■□□□□ 0.52
TIMP3-201ENST00000266085 TEX13AQ9BXU3 409 aaPredicted RBP18.29■□□□□ 0.52
TIMP3-201ENST00000266085 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
TIMP3-201ENST00000266085 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
TIMP3-201ENST00000266085 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
TIMP3-201ENST00000266085 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
TIMP3-201ENST00000266085 FLT4P35916 1363 aa18.29■□□□□ 0.52
TIMP3-201ENST00000266085 JMYQ8N9B5 988 aa18.29■□□□□ 0.52
TIMP3-201ENST00000266085 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
TIMP3-201ENST00000266085 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
TIMP3-201ENST00000266085 PDRG1Q9NUG6 133 aa18.28■□□□□ 0.52
TIMP3-201ENST00000266085 PIK3R4Q99570 1358 aa18.28■□□□□ 0.52
TIMP3-201ENST00000266085 TOM1O60784 492 aa18.28■□□□□ 0.52
TIMP3-201ENST00000266085 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
TIMP3-201ENST00000266085 KRT85P78386 507 aa18.28■□□□□ 0.52
TIMP3-201ENST00000266085 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
TIMP3-201ENST00000266085 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
TIMP3-201ENST00000266085 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
TIMP3-201ENST00000266085 NUP133Q8WUM0 1156 aa18.27■□□□□ 0.52
TIMP3-201ENST00000266085 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
TIMP3-201ENST00000266085 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
TIMP3-201ENST00000266085 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.51
TIMP3-201ENST00000266085 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.51
TIMP3-201ENST00000266085 A0A0U1RQG5 324 aaPredicted RBP18.27■□□□□ 0.51
TIMP3-201ENST00000266085 RBM5P52756 815 aaKnown RBP eCLIP18.27■□□□□ 0.51
TIMP3-201ENST00000266085 EYA1Q99502 592 aa18.27■□□□□ 0.51
TIMP3-201ENST00000266085 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
TIMP3-201ENST00000266085 ARHGAP45Q92619 1136 aa18.26■□□□□ 0.51
TIMP3-201ENST00000266085 ABCC1P33527 1531 aa18.26■□□□□ 0.51
TIMP3-201ENST00000266085 CHPF2Q9P2E5 772 aa18.26■□□□□ 0.51
TIMP3-201ENST00000266085 AKAP4Q5JQC9 854 aa18.26■□□□□ 0.51
TIMP3-201ENST00000266085 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
TIMP3-201ENST00000266085 CCDC69A6NI79 296 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 UHRF1BP1Q6BDS2 1440 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 MEIS3Q99687 375 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 IGHDP01880 384 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 UBAC1Q9BSL1 405 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
TIMP3-201ENST00000266085 CWC25Q9NXE8 425 aaPredicted RBP18.24■□□□□ 0.51
TIMP3-201ENST00000266085 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
TIMP3-201ENST00000266085 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
TIMP3-201ENST00000266085 TXLNAP40222 546 aa18.24■□□□□ 0.51
TIMP3-201ENST00000266085 CCDC70Q6NSX1 233 aa18.24■□□□□ 0.51
TIMP3-201ENST00000266085 CAVIN4Q5BKX8 364 aa18.24■□□□□ 0.51
TIMP3-201ENST00000266085 LDHAL6AQ6ZMR3 332 aa18.24■□□□□ 0.51
TIMP3-201ENST00000266085 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
TIMP3-201ENST00000266085 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
TIMP3-201ENST00000266085 ME1P48163 572 aa18.23■□□□□ 0.51
TIMP3-201ENST00000266085 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
TIMP3-201ENST00000266085 TSPY26PQ9H489 355 aa18.23■□□□□ 0.51
TIMP3-201ENST00000266085 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
TIMP3-201ENST00000266085 IMMTQ16891 758 aaKnown RBP18.23■□□□□ 0.51
TIMP3-201ENST00000266085 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
TIMP3-201ENST00000266085 PDIA4P13667 645 aaKnown RBP18.22■□□□□ 0.51
TIMP3-201ENST00000266085 CDKL5O76039 1030 aa18.22■□□□□ 0.51
TIMP3-201ENST00000266085 MCM4P33991 863 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms