RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 YTHDC2Q9H6S0 1430 aaKnown RBP10.6□□□□□ -0.71
VAPB-201ENST00000265619 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
VAPB-201ENST00000265619 C16orf45Q96MC5 204 aaPredicted RBP10.6□□□□□ -0.71
VAPB-201ENST00000265619 IQSEC2Q5JU85 1478 aa10.6□□□□□ -0.71
VAPB-201ENST00000265619 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
VAPB-201ENST00000265619 DTNBO60941 627 aa10.6□□□□□ -0.71
VAPB-201ENST00000265619 GYS2P54840 703 aa10.6□□□□□ -0.71
VAPB-201ENST00000265619 LRMPQ12912 555 aa10.6□□□□□ -0.71
VAPB-201ENST00000265619 TERF2IPQ9NYB0 399 aa10.6□□□□□ -0.71
VAPB-201ENST00000265619 RBM6P78332 1123 aaKnown RBP10.59□□□□□ -0.71
VAPB-201ENST00000265619 NOL8Q76FK4 1167 aaKnown RBP10.59□□□□□ -0.71
VAPB-201ENST00000265619 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
VAPB-201ENST00000265619 ARHGEF40Q8TER5 1519 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 CCDC66A2RUB6 948 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 ATF7IPQ6VMQ6 1270 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
VAPB-201ENST00000265619 DIAPH3Q9NSV4 1193 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 DDX19BQ9UMR2 479 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 SIRT2Q8IXJ6 389 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
VAPB-201ENST00000265619 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
VAPB-201ENST00000265619 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 RAD51AP2Q09MP3 1159 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
VAPB-201ENST00000265619 RABEP1Q15276 862 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 EP400NLQ6ZTU2 488 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 A2ML1A8K2U0 1454 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 LAMC1P11047 1609 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 PTGS1P23219 599 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 KCNG1Q9UIX4 513 aa10.58□□□□□ -0.72
VAPB-201ENST00000265619 USP48Q86UV5 1035 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 NME9Q86XW9 330 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 OTUD7AQ8TE49 926 aaPredicted RBP10.57□□□□□ -0.72
VAPB-201ENST00000265619 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 PPLO60437 1756 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 KDM4AO75164 1064 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 MYCNP04198 464 aaPredicted RBP10.57□□□□□ -0.72
VAPB-201ENST00000265619 ZNF446Q9NWS9 450 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 THEMISQ8N1K5 641 aaPredicted RBP10.57□□□□□ -0.72
VAPB-201ENST00000265619 CFAP53Q96M91 514 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 NRBP1Q9UHY1 535 aa10.57□□□□□ -0.72
VAPB-201ENST00000265619 TRIM66O15016 1216 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 MBD3O95983 291 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 HSPA2P54652 639 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 CHAF1AQ13111 956 aaPredicted RBP10.56□□□□□ -0.72
VAPB-201ENST00000265619 RRS1Q15050 365 aaKnown RBP10.56□□□□□ -0.72
VAPB-201ENST00000265619 KRT222Q8N1A0 295 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
VAPB-201ENST00000265619 NUDT16Q96DE0 195 aaKnown RBP10.56□□□□□ -0.72
VAPB-201ENST00000265619 LCMT1Q9UIC8 334 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 IQGAP1P46940 1657 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 HMOX1P09601 288 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 WDR63Q8IWG1 891 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 ATAD2Q6PL18 1390 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 NPHP1O15259 732 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 CDC45O75419 566 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 FBXO38Q6PIJ6 1188 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
VAPB-201ENST00000265619 RSPH14Q9UHP6 348 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 A0A1W2PP64 1363 aa10.56□□□□□ -0.72
VAPB-201ENST00000265619 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
VAPB-201ENST00000265619 BRD1O95696 1058 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 PSEN1P49768 467 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 CALCOCO1Q9P1Z2 691 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 ERBB3P21860 1342 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 GIMAP6Q6P9H5 292 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 NEK11Q8NG66 645 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 GTF3C6Q969F1 213 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
VAPB-201ENST00000265619 TMEM2Q9UHN6 1383 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 SIRT1Q96EB6 747 aa10.55□□□□□ -0.72
VAPB-201ENST00000265619 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 TMEM131LA2VDJ0 1609 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
VAPB-201ENST00000265619 ANKRD36BQ8N2N9 1353 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 HMGB1P09429 215 aaKnown RBP10.54□□□□□ -0.72
VAPB-201ENST00000265619 KCNA6P17658 529 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 CYP2C19P33261 490 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 LTV1Q96GA3 475 aaPredicted RBP10.54□□□□□ -0.72
VAPB-201ENST00000265619 TMX3Q96JJ7 454 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 NOP2P46087 812 aaKnown RBP10.54□□□□□ -0.72
VAPB-201ENST00000265619 ZNF592Q92610 1267 aa10.54□□□□□ -0.72
VAPB-201ENST00000265619 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
VAPB-201ENST00000265619 TNNT1P13805 278 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 USP27XA6NNY8 438 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 FYB1O15117 783 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 ELF2Q15723 593 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 ALKQ9UM73 1620 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 ADGRB1O14514 1584 aa10.53□□□□□ -0.72
VAPB-201ENST00000265619 POLR3AO14802 1390 aaPredicted RBP10.53□□□□□ -0.72
VAPB-201ENST00000265619 LRRN4CLQ8ND94 238 aa10.52□□□□□ -0.72
VAPB-201ENST00000265619 CNPY2Q9Y2B0 182 aa10.52□□□□□ -0.72
VAPB-201ENST00000265619 SMTNL1A8MU46 457 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms