RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 C1orf141Q5JVX7 400 aa10.16□□□□□ -0.78
TNPO3-201ENST00000265388 GAS2L3Q86XJ1 694 aa10.15□□□□□ -0.78
TNPO3-201ENST00000265388 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
TNPO3-201ENST00000265388 TTC21AQ8NDW8 1320 aa10.15□□□□□ -0.78
TNPO3-201ENST00000265388 KIAA0232Q92628 1395 aa10.15□□□□□ -0.78
TNPO3-201ENST00000265388 CPSF1Q10570 1443 aaKnown RBP10.15□□□□□ -0.78
TNPO3-201ENST00000265388 LTKP29376 864 aa10.15□□□□□ -0.78
TNPO3-201ENST00000265388 THEMISQ8N1K5 641 aaPredicted RBP10.15□□□□□ -0.78
TNPO3-201ENST00000265388 TMEM2Q9UHN6 1383 aa10.15□□□□□ -0.79
TNPO3-201ENST00000265388 TMX3Q96JJ7 454 aa10.15□□□□□ -0.79
TNPO3-201ENST00000265388 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.79
TNPO3-201ENST00000265388 SYCE3A1L190 88 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 IFIT2P09913 472 aaKnown RBP10.14□□□□□ -0.79
TNPO3-201ENST00000265388 CLCN1P35523 988 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 CNTROBQ8N137 903 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 MYO5BQ9ULV0 1848 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 MBD3O95983 291 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 PKP1Q13835 747 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 ZNF530Q6P9A1 599 aaPredicted RBP10.14□□□□□ -0.79
TNPO3-201ENST00000265388 SIRT1Q96EB6 747 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 CPS1P31327 1500 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 ANXA1P04083 346 aa10.14□□□□□ -0.79
TNPO3-201ENST00000265388 AIMP1Q12904 312 aaKnown RBP10.14□□□□□ -0.79
TNPO3-201ENST00000265388 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
TNPO3-201ENST00000265388 PNMA6EA0A0J9YXQ4 647 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
TNPO3-201ENST00000265388 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 ZSCAN23Q3MJ62 389 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 PHF14O94880 888 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 HSP90AA2PQ14568 343 aaPredicted RBP10.13□□□□□ -0.79
TNPO3-201ENST00000265388 HSP90AB4PQ58FF6 505 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 ESCO1Q5FWF5 840 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 PPP1R42Q7Z4L9 355 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 SMC3Q9UQE7 1217 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
TNPO3-201ENST00000265388 CLASRPQ8N2M8 674 aaKnown RBP10.13□□□□□ -0.79
TNPO3-201ENST00000265388 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
TNPO3-201ENST00000265388 LARP6Q9BRS8 491 aaKnown RBP10.12□□□□□ -0.79
TNPO3-201ENST00000265388 SBNO1A3KN83 1393 aa10.12□□□□□ -0.79
TNPO3-201ENST00000265388 FGD1P98174 961 aa10.12□□□□□ -0.79
TNPO3-201ENST00000265388 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
TNPO3-201ENST00000265388 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
TNPO3-201ENST00000265388 CHAMP1Q96JM3 812 aa10.12□□□□□ -0.79
TNPO3-201ENST00000265388 PHAXQ9H814 394 aaKnown RBP10.12□□□□□ -0.79
TNPO3-201ENST00000265388 HDAC5Q9UQL6 1122 aa10.12□□□□□ -0.79
TNPO3-201ENST00000265388 GOLGA6L4A6NEF3 574 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
TNPO3-201ENST00000265388 DLC1Q96QB1 1528 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 KIF20BQ96Q89 1820 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 ARHGEF10O15013 1369 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 VPS37CA5D8V6 355 aaPredicted RBP10.11□□□□□ -0.79
TNPO3-201ENST00000265388 KIF1BPQ96EK5 621 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 USP6P35125 1406 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 CHMLP26374 656 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 HOXC9P31274 260 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 ZSCAN30Q86W11 494 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 CLTCQ00610 1675 aaKnown RBP10.11□□□□□ -0.79
TNPO3-201ENST00000265388 PI4KAP2A4QPH2 592 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
TNPO3-201ENST00000265388 MPRIPQ6WCQ1 1025 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 PI4KAP1Q8N8J0 262 aa10.11□□□□□ -0.79
TNPO3-201ENST00000265388 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
TNPO3-201ENST00000265388 FIBPO43427 364 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 TSPY26PQ9H489 355 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 NAP1L2Q9ULW6 460 aaPredicted RBP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 RAB11FIP3O75154 756 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 ZKSCAN1P17029 563 aaPredicted RBP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 MPNDQ8N594 471 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 RHPN1Q8TCX5 695 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 ARID3AQ99856 593 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 CHPF2Q9P2E5 772 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 CHMP3Q9Y3E7 222 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 HTATSF1O43719 755 aaKnown RBP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
TNPO3-201ENST00000265388 LMBRD1Q9NUN5 540 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 PHF8Q9UPP1 1060 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
TNPO3-201ENST00000265388 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.09□□□□□ -0.79
TNPO3-201ENST00000265388 R3HCC1Q9Y3T6 440 aaKnown RBP10.09□□□□□ -0.79
TNPO3-201ENST00000265388 ATP6V1DQ9Y5K8 247 aa10.09□□□□□ -0.79
TNPO3-201ENST00000265388 KIAA2012Q0VF49 1180 aa10.09□□□□□ -0.79
TNPO3-201ENST00000265388 DDIT3P35638 169 aa10.09□□□□□ -0.79
TNPO3-201ENST00000265388 SIL1Q9H173 461 aa10.09□□□□□ -0.79
TNPO3-201ENST00000265388 PALD1Q9ULE6 856 aa10.09□□□□□ -0.79
TNPO3-201ENST00000265388 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
TNPO3-201ENST00000265388 CDC42BPGQ6DT37 1551 aa10.09□□□□□ -0.79
TNPO3-201ENST00000265388 DDX58O95786 925 aaKnown RBP10.08□□□□□ -0.8
TNPO3-201ENST00000265388 KCNA6P17658 529 aa10.08□□□□□ -0.8
TNPO3-201ENST00000265388 RICTORQ6R327 1708 aa10.08□□□□□ -0.8
TNPO3-201ENST00000265388 NCOA3Q9Y6Q9 1424 aa10.08□□□□□ -0.8
TNPO3-201ENST00000265388 CASTP20810 708 aaKnown RBP10.08□□□□□ -0.8
TNPO3-201ENST00000265388 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms