RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 RRP9O43818 475 aaKnown RBP17.58■□□□□ 0.4
NID1-201ENST00000264187 PRPF40BQ6NWY9 871 aaKnown RBP17.58■□□□□ 0.4
NID1-201ENST00000264187 PROSER2Q86WR7 435 aaPredicted RBP17.58■□□□□ 0.4
NID1-201ENST00000264187 TOP1P11387 765 aaKnown RBP17.58■□□□□ 0.4
NID1-201ENST00000264187 SLC12A5Q9H2X9 1139 aa17.58■□□□□ 0.4
NID1-201ENST00000264187 GTF2F1P35269 517 aaKnown RBP eCLIP17.57■□□□□ 0.4
NID1-201ENST00000264187 SPTY2D1Q68D10 685 aaPredicted RBP17.57■□□□□ 0.4
NID1-201ENST00000264187 ZSCAN30Q86W11 494 aa17.57■□□□□ 0.4
NID1-201ENST00000264187 NUP88Q99567 741 aaPredicted RBP17.57■□□□□ 0.4
NID1-201ENST00000264187 CEP131Q9UPN4 1083 aa17.57■□□□□ 0.4
NID1-201ENST00000264187 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
NID1-201ENST00000264187 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
NID1-201ENST00000264187 HOOK3Q86VS8 718 aa17.57■□□□□ 0.4
NID1-201ENST00000264187 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
NID1-201ENST00000264187 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
NID1-201ENST00000264187 HLTFQ14527 1009 aaKnown RBP eCLIP17.57■□□□□ 0.4
NID1-201ENST00000264187 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
NID1-201ENST00000264187 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
NID1-201ENST00000264187 SEC63Q9UGP8 760 aaKnown RBP17.57■□□□□ 0.4
NID1-201ENST00000264187 SMC1AQ14683 1233 aaKnown RBP17.56■□□□□ 0.4
NID1-201ENST00000264187 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
NID1-201ENST00000264187 PTPRGP23470 1445 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 CTNNA2P26232 953 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 C16orf45Q96MC5 204 aaPredicted RBP17.56■□□□□ 0.4
NID1-201ENST00000264187 FAM107BQ9H098 131 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 TRIM21P19474 475 aaKnown RBP17.56■□□□□ 0.4
NID1-201ENST00000264187 FAM69CQ0P6D2 419 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 KRT32Q14532 448 aa17.56■□□□□ 0.4
NID1-201ENST00000264187 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
NID1-201ENST00000264187 PRPF4BQ13523 1007 aaKnown RBP17.55■□□□□ 0.4
NID1-201ENST00000264187 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
NID1-201ENST00000264187 POLR3DP05423 398 aaPredicted RBP17.55■□□□□ 0.4
NID1-201ENST00000264187 TSG101Q99816 390 aa17.55■□□□□ 0.4
NID1-201ENST00000264187 WDR78Q5VTH9 848 aa17.55■□□□□ 0.4
NID1-201ENST00000264187 TMCO5BA8MYB1 307 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 ATP2C2O75185 946 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 RRS1Q15050 365 aaKnown RBP17.54■□□□□ 0.4
NID1-201ENST00000264187 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 CABP1Q9NZU7 370 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
NID1-201ENST00000264187 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 SRRTQ9BXP5 876 aaKnown RBP17.54■□□□□ 0.4
NID1-201ENST00000264187 MKNK2Q9HBH9 465 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 BIN1O00499 593 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 METTL24Q5JXM2 366 aa17.54■□□□□ 0.4
NID1-201ENST00000264187 CRACR2BQ8N4Y2 399 aaPredicted RBP17.54■□□□□ 0.4
NID1-201ENST00000264187 GCOM1H8Y6P7 765 aaPredicted RBP17.53■□□□□ 0.4
NID1-201ENST00000264187 CCDC175P0C221 793 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 MYZAPP0CAP1 466 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 PAFAH1B1P43034 410 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 VPS36Q86VN1 386 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 ZSWIM4Q9H7M6 989 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 TNIP1Q15025 636 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 ANO10Q9NW15 660 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
NID1-201ENST00000264187 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
NID1-201ENST00000264187 ISM2Q6H9L7 571 aa17.52■□□□□ 0.4
NID1-201ENST00000264187 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
NID1-201ENST00000264187 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.39
NID1-201ENST00000264187 PANK2Q9BZ23 570 aa17.52■□□□□ 0.39
NID1-201ENST00000264187 NBPF1Q3BBV0 1214 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 PPP4R3AQ6IN85 833 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 RANBP6O60518 1105 aaKnown RBP17.51■□□□□ 0.39
NID1-201ENST00000264187 MAATS1Q7Z4T9 603 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
NID1-201ENST00000264187 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 HOMER2Q9NSB8 354 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 TMOD2Q9NZR1 351 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 TCERG1LQ5VWI1 586 aa17.51■□□□□ 0.39
NID1-201ENST00000264187 ZHX1Q9UKY1 873 aaPredicted RBP17.51■□□□□ 0.39
NID1-201ENST00000264187 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
NID1-201ENST00000264187 C8orf76Q96K31 380 aa17.5■□□□□ 0.39
NID1-201ENST00000264187 GDPD2Q9HCC8 539 aa17.5■□□□□ 0.39
NID1-201ENST00000264187 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
NID1-201ENST00000264187 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
NID1-201ENST00000264187 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
NID1-201ENST00000264187 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
NID1-201ENST00000264187 CTR9Q6PD62 1173 aa17.49■□□□□ 0.39
NID1-201ENST00000264187 PPM1EQ8WY54 764 aa17.49■□□□□ 0.39
NID1-201ENST00000264187 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
NID1-201ENST00000264187 KIF2AO00139 706 aaPredicted RBP17.49■□□□□ 0.39
NID1-201ENST00000264187 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
NID1-201ENST00000264187 TMC6Q7Z403 805 aa17.49■□□□□ 0.39
NID1-201ENST00000264187 MTIF2P46199 727 aaKnown RBP17.49■□□□□ 0.39
NID1-201ENST00000264187 ZBTB9Q96C00 473 aa17.49■□□□□ 0.39
NID1-201ENST00000264187 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
NID1-201ENST00000264187 NOP2P46087 812 aaKnown RBP17.48■□□□□ 0.39
NID1-201ENST00000264187 NAPBQ9H115 298 aa17.48■□□□□ 0.39
NID1-201ENST00000264187 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
NID1-201ENST00000264187 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
NID1-201ENST00000264187 YEATS4O95619 227 aa17.48■□□□□ 0.39
NID1-201ENST00000264187 LMAN1P49257 510 aa17.48■□□□□ 0.39
NID1-201ENST00000264187 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
NID1-201ENST00000264187 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
NID1-201ENST00000264187 PUF60Q9UHX1 559 aaKnown RBP17.48■□□□□ 0.39
NID1-201ENST00000264187 MYO1BO43795 1136 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms