RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 FKBP8Q14318 412 aa29.26■■■□□ 2.27
UFD1-201ENST00000263202 SLC52A2Q9HAB3 445 aa29.26■■■□□ 2.27
UFD1-201ENST00000263202 BTBD11A6QL63 1104 aa29.25■■■□□ 2.27
UFD1-201ENST00000263202 ELL2O00472 640 aaPredicted RBP29.25■■■□□ 2.27
UFD1-201ENST00000263202 KRT24Q2M2I5 525 aa29.25■■■□□ 2.27
UFD1-201ENST00000263202 TOGARAM1Q9Y4F4 1720 aa29.25■■■□□ 2.27
UFD1-201ENST00000263202 ZNF428Q96B54 188 aa29.24■■■□□ 2.27
UFD1-201ENST00000263202 PLIN1O60240 522 aa29.23■■■□□ 2.27
UFD1-201ENST00000263202 FBXO41Q8TF61 875 aa29.22■■■□□ 2.27
UFD1-201ENST00000263202 NFATC2IPQ8NCF5 419 aa29.22■■■□□ 2.27
UFD1-201ENST00000263202 BCL2L13Q9BXK5 485 aa29.22■■■□□ 2.27
UFD1-201ENST00000263202 SSH1Q8WYL5 1049 aa29.21■■■□□ 2.27
UFD1-201ENST00000263202 GLI3P10071 1580 aa29.21■■■□□ 2.27
UFD1-201ENST00000263202 DDB1Q16531 1140 aa29.2■■■□□ 2.27
UFD1-201ENST00000263202 ALDH1L2Q3SY69 923 aa29.2■■■□□ 2.27
UFD1-201ENST00000263202 FAM98CQ17RN3 349 aaKnown RBP29.2■■■□□ 2.26
UFD1-201ENST00000263202 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.2■■■□□ 2.26
UFD1-201ENST00000263202 ATRNO75882 1429 aa29.19■■■□□ 2.26
UFD1-201ENST00000263202 ERVV-2B6SEH9 535 aa29.19■■■□□ 2.26
UFD1-201ENST00000263202 KCNQ3O43525 872 aa29.19■■■□□ 2.26
UFD1-201ENST00000263202 CABP4P57796 275 aa29.19■■■□□ 2.26
UFD1-201ENST00000263202 SMC4Q9NTJ3 1288 aa29.18■■■□□ 2.26
UFD1-201ENST00000263202 ITGB4P16144 1822 aa29.18■■■□□ 2.26
UFD1-201ENST00000263202 EIF4A1P60842 406 aaKnown RBP29.17■■■□□ 2.26
UFD1-201ENST00000263202 THSD7AQ9UPZ6 1657 aa29.17■■■□□ 2.26
UFD1-201ENST00000263202 GJD4Q96KN9 370 aaPredicted RBP29.15■■■□□ 2.26
UFD1-201ENST00000263202 TRPC5Q9UL62 973 aaPredicted RBP29.15■■■□□ 2.26
UFD1-201ENST00000263202 SOS1Q07889 1333 aaPredicted RBP29.14■■■□□ 2.26
UFD1-201ENST00000263202 PAPPAQ13219 1627 aa29.14■■■□□ 2.26
UFD1-201ENST00000263202 ZNF790Q6PG37 636 aa29.13■■■□□ 2.25
UFD1-201ENST00000263202 DOT1LQ8TEK3 1739 aa29.13■■■□□ 2.25
UFD1-201ENST00000263202 BRPF1P55201 1214 aaPredicted RBP29.13■■■□□ 2.25
UFD1-201ENST00000263202 FRAT1Q92837 279 aaPredicted RBP29.13■■■□□ 2.25
UFD1-201ENST00000263202 SLC39A6Q13433 755 aa29.12■■■□□ 2.25
UFD1-201ENST00000263202 HEG1Q9ULI3 1381 aa29.11■■■□□ 2.25
UFD1-201ENST00000263202 MRPL50Q8N5N7 158 aaKnown RBP29.11■■■□□ 2.25
UFD1-201ENST00000263202 UBR2Q8IWV8 1755 aa29.11■■■□□ 2.25
UFD1-201ENST00000263202 C20orf194Q5TEA3 1177 aa29.1■■■□□ 2.25
UFD1-201ENST00000263202 MARCH10Q8NA82 808 aaPredicted RBP29.1■■■□□ 2.25
UFD1-201ENST00000263202 TCERG1O14776 1098 aaKnown RBP29.1■■■□□ 2.25
UFD1-201ENST00000263202 CANXP27824 592 aaKnown RBP29.09■■■□□ 2.25
UFD1-201ENST00000263202 HOXB7P09629 217 aa29.08■■■□□ 2.25
UFD1-201ENST00000263202 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
UFD1-201ENST00000263202 KIF16BQ96L93 1317 aa29.08■■■□□ 2.25
UFD1-201ENST00000263202 CACNA1FO60840 1977 aa29.08■■■□□ 2.25
UFD1-201ENST00000263202 ERICH6BQ5W0A0 696 aa29.08■■■□□ 2.25
UFD1-201ENST00000263202 C5P01031 1676 aa29.07■■■□□ 2.24
UFD1-201ENST00000263202 NOB1Q9ULX3 412 aaKnown RBP29.07■■■□□ 2.24
UFD1-201ENST00000263202 TMOD3Q9NYL9 352 aa29.06■■■□□ 2.24
UFD1-201ENST00000263202 KAT6BQ8WYB5 2073 aa29.06■■■□□ 2.24
UFD1-201ENST00000263202 ZKSCAN2Q63HK3 967 aa29.06■■■□□ 2.24
UFD1-201ENST00000263202 TTC5Q8N0Z6 440 aa29.06■■■□□ 2.24
UFD1-201ENST00000263202 ONECUT3O60422 494 aaPredicted RBP29.05■■■□□ 2.24
UFD1-201ENST00000263202 GIGYF1O75420 1035 aaPredicted RBP29.05■■■□□ 2.24
UFD1-201ENST00000263202 PDE3AQ14432 1141 aa29.05■■■□□ 2.24
UFD1-201ENST00000263202 A0A0G2JS52 829 aa29.04■■■□□ 2.24
UFD1-201ENST00000263202 MYT1Q01538 1121 aa29.04■■■□□ 2.24
UFD1-201ENST00000263202 CCDC30Q5VVM6 783 aa29.04■■■□□ 2.24
UFD1-201ENST00000263202 ZNF496Q96IT1 587 aaPredicted RBP29.04■■■□□ 2.24
UFD1-201ENST00000263202 BCL9O00512 1426 aa29.03■■■□□ 2.24
UFD1-201ENST00000263202 PIGBQ92521 554 aa29.03■■■□□ 2.24
UFD1-201ENST00000263202 TNNQ9UQP3 1299 aa29.03■■■□□ 2.24
UFD1-201ENST00000263202 KCPQ6ZWJ8 1503 aa29.02■■■□□ 2.24
UFD1-201ENST00000263202 HDGFL1Q5TGJ6 251 aa29.02■■■□□ 2.24
UFD1-201ENST00000263202 IPO8O15397 1037 aaKnown RBP29.01■■■□□ 2.24
UFD1-201ENST00000263202 ATF7IPQ6VMQ6 1270 aa29.01■■■□□ 2.24
UFD1-201ENST00000263202 CRBNQ96SW2 442 aa29.01■■■□□ 2.24
UFD1-201ENST00000263202 EXOC6Q8TAG9 804 aa29.01■■■□□ 2.23
UFD1-201ENST00000263202 NECTIN2Q92692 538 aa29.01■■■□□ 2.23
UFD1-201ENST00000263202 FMNL2Q96PY5 1086 aa29.01■■■□□ 2.23
UFD1-201ENST00000263202 TRIM27P14373 513 aa29■■■□□ 2.23
UFD1-201ENST00000263202 LAMB4A4D0S4 1761 aa29■■■□□ 2.23
UFD1-201ENST00000263202 PRAMEF22A3QJZ6 481 aa28.99■■■□□ 2.23
UFD1-201ENST00000263202 SLC4A2P04920 1241 aa28.99■■■□□ 2.23
UFD1-201ENST00000263202 ZNF772Q68DY9 489 aaPredicted RBP28.99■■■□□ 2.23
UFD1-201ENST00000263202 ARHGAP45Q92619 1136 aa28.99■■■□□ 2.23
UFD1-201ENST00000263202 STK31Q9BXU1 1019 aa28.99■■■□□ 2.23
UFD1-201ENST00000263202 EIF2S2P20042 333 aaKnown RBP28.99■■■□□ 2.23
UFD1-201ENST00000263202 PRIM1P49642 420 aaKnown RBP28.99■■■□□ 2.23
UFD1-201ENST00000263202 PANK1Q8TE04 598 aa28.99■■■□□ 2.23
UFD1-201ENST00000263202 CHMP4AQ9BY43 222 aa28.99■■■□□ 2.23
UFD1-201ENST00000263202 RLBP1P12271 317 aa28.98■■■□□ 2.23
UFD1-201ENST00000263202 CLUAP1Q96AJ1 413 aa28.97■■■□□ 2.23
UFD1-201ENST00000263202 MS4A1P11836 297 aa28.97■■■□□ 2.23
UFD1-201ENST00000263202 SEPT12Q8IYM1 358 aa28.97■■■□□ 2.23
UFD1-201ENST00000263202 DZIP1LQ8IYY4 767 aaKnown RBP28.97■■■□□ 2.23
UFD1-201ENST00000263202 SYTL4Q96C24 671 aaPredicted RBP28.97■■■□□ 2.23
UFD1-201ENST00000263202 SNRPA1P09661 255 aaKnown RBP28.96■■■□□ 2.23
UFD1-201ENST00000263202 ACSBG1Q96GR2 724 aa28.96■■■□□ 2.23
UFD1-201ENST00000263202 ASAP1Q9ULH1 1129 aa28.96■■■□□ 2.23
UFD1-201ENST00000263202 ATG3Q9NT62 314 aa28.95■■■□□ 2.23
UFD1-201ENST00000263202 BRWD3Q6RI45 1802 aa28.94■■■□□ 2.22
UFD1-201ENST00000263202 FTSJ3Q8IY81 847 aaKnown RBP28.94■■■□□ 2.22
UFD1-201ENST00000263202 G2E3Q7L622 706 aa28.93■■■□□ 2.22
UFD1-201ENST00000263202 PTPRCP08575 1304 aa28.93■■■□□ 2.22
UFD1-201ENST00000263202 CHPF2Q9P2E5 772 aa28.92■■■□□ 2.22
UFD1-201ENST00000263202 COG6Q9Y2V7 657 aa28.92■■■□□ 2.22
UFD1-201ENST00000263202 PTCD1O75127 700 aaKnown RBP28.92■■■□□ 2.22
UFD1-201ENST00000263202 API5Q9BZZ5 524 aaKnown RBP28.92■■■□□ 2.22
UFD1-201ENST00000263202 PPP4R2Q9NY27 417 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms