RNA–Protein interactions for RNA: ENST00000262942.9

ARPC1A-201, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1A, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-201ENST00000262942 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
ARPC1A-201ENST00000262942 COL5A3P25940 1745 aaPredicted RBP18.55■□□□□ 0.56
ARPC1A-201ENST00000262942 PTF1AQ7RTS3 328 aa18.55■□□□□ 0.56
ARPC1A-201ENST00000262942 ZNF831Q5JPB2 1677 aa18.55■□□□□ 0.56
ARPC1A-201ENST00000262942 KCNQ2O43526 872 aa18.55■□□□□ 0.56
ARPC1A-201ENST00000262942 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
ARPC1A-201ENST00000262942 ERVV-2B6SEH9 535 aa18.54■□□□□ 0.56
ARPC1A-201ENST00000262942 NGEFQ8N5V2 710 aa18.54■□□□□ 0.56
ARPC1A-201ENST00000262942 SLC52A2Q9HAB3 445 aa18.54■□□□□ 0.56
ARPC1A-201ENST00000262942 RREB1Q92766 1687 aa18.54■□□□□ 0.56
ARPC1A-201ENST00000262942 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
ARPC1A-201ENST00000262942 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
ARPC1A-201ENST00000262942 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.56
ARPC1A-201ENST00000262942 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.56
ARPC1A-201ENST00000262942 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
ARPC1A-201ENST00000262942 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
ARPC1A-201ENST00000262942 CABP4P57796 275 aa18.51■□□□□ 0.55
ARPC1A-201ENST00000262942 TEFQ10587 303 aa18.51■□□□□ 0.55
ARPC1A-201ENST00000262942 PIGBQ92521 554 aa18.51■□□□□ 0.55
ARPC1A-201ENST00000262942 ILDR2Q71H61 639 aa18.5■□□□□ 0.55
ARPC1A-201ENST00000262942 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
ARPC1A-201ENST00000262942 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
ARPC1A-201ENST00000262942 ZNF853P0CG23 659 aa18.49■□□□□ 0.55
ARPC1A-201ENST00000262942 WDR63Q8IWG1 891 aa18.49■□□□□ 0.55
ARPC1A-201ENST00000262942 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
ARPC1A-201ENST00000262942 TUBGCP6Q96RT7 1819 aa18.48■□□□□ 0.55
ARPC1A-201ENST00000262942 MIS18AQ9NYP9 233 aa18.48■□□□□ 0.55
ARPC1A-201ENST00000262942 IL16Q14005 1332 aa18.48■□□□□ 0.55
ARPC1A-201ENST00000262942 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 TRIM37O94972 964 aa18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 TAF7Q15545 349 aaPredicted RBP18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 KCNQ3O43525 872 aa18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 SLC39A6Q13433 755 aa18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 CDCA7LQ96GN5 454 aa18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
ARPC1A-201ENST00000262942 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
ARPC1A-201ENST00000262942 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
ARPC1A-201ENST00000262942 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
ARPC1A-201ENST00000262942 ASAP1Q9ULH1 1129 aa18.46■□□□□ 0.55
ARPC1A-201ENST00000262942 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
ARPC1A-201ENST00000262942 CHL1O00533 1208 aa18.45■□□□□ 0.54
ARPC1A-201ENST00000262942 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
ARPC1A-201ENST00000262942 ATG3Q9NT62 314 aa18.45■□□□□ 0.54
ARPC1A-201ENST00000262942 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
ARPC1A-201ENST00000262942 GNAI1P63096 354 aa18.44■□□□□ 0.54
ARPC1A-201ENST00000262942 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
ARPC1A-201ENST00000262942 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
ARPC1A-201ENST00000262942 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
ARPC1A-201ENST00000262942 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
ARPC1A-201ENST00000262942 SLFN5Q08AF3 891 aa18.43■□□□□ 0.54
ARPC1A-201ENST00000262942 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
ARPC1A-201ENST00000262942 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
ARPC1A-201ENST00000262942 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
ARPC1A-201ENST00000262942 BABAM1Q9NWV8 329 aa18.42■□□□□ 0.54
ARPC1A-201ENST00000262942 UBR3Q6ZT12 1888 aa18.42■□□□□ 0.54
ARPC1A-201ENST00000262942 C4BP0C0L5 1744 aa18.42■□□□□ 0.54
ARPC1A-201ENST00000262942 TRMT2AQ8IZ69 625 aaKnown RBP18.42■□□□□ 0.54
ARPC1A-201ENST00000262942 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
ARPC1A-201ENST00000262942 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
ARPC1A-201ENST00000262942 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
ARPC1A-201ENST00000262942 E9PSI1 815 aa18.39■□□□□ 0.53
ARPC1A-201ENST00000262942 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
ARPC1A-201ENST00000262942 DUSP27Q5VZP5 1158 aa18.39■□□□□ 0.53
ARPC1A-201ENST00000262942 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
ARPC1A-201ENST00000262942 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
ARPC1A-201ENST00000262942 C4AP0C0L4 1744 aa18.38■□□□□ 0.53
ARPC1A-201ENST00000262942 TTC5Q8N0Z6 440 aa18.38■□□□□ 0.53
ARPC1A-201ENST00000262942 PRAMEF22A3QJZ6 481 aa18.37■□□□□ 0.53
ARPC1A-201ENST00000262942 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
ARPC1A-201ENST00000262942 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
ARPC1A-201ENST00000262942 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
ARPC1A-201ENST00000262942 APBA3O96018 575 aa18.36■□□□□ 0.53
ARPC1A-201ENST00000262942 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
ARPC1A-201ENST00000262942 UPF1Q92900 1129 aaKnown RBP eCLIP18.35■□□□□ 0.53
ARPC1A-201ENST00000262942 FMNL2Q96PY5 1086 aa18.35■□□□□ 0.53
ARPC1A-201ENST00000262942 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
ARPC1A-201ENST00000262942 LOC102724428A0A0B4J2F2 783 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 PLSCR1O15162 318 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 SIK1P57059 783 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 KCNQ4P56696 695 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 ITPK1Q13572 414 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 PROM2Q8N271 834 aa18.34■□□□□ 0.53
ARPC1A-201ENST00000262942 BCORQ6W2J9 1755 aa18.33■□□□□ 0.53
ARPC1A-201ENST00000262942 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
ARPC1A-201ENST00000262942 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
ARPC1A-201ENST00000262942 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
ARPC1A-201ENST00000262942 EN1Q05925 392 aaPredicted RBP18.31■□□□□ 0.52
ARPC1A-201ENST00000262942 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
ARPC1A-201ENST00000262942 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
ARPC1A-201ENST00000262942 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
ARPC1A-201ENST00000262942 CAMKK2Q96RR4 588 aa18.31■□□□□ 0.52
ARPC1A-201ENST00000262942 ARFGEF2Q9Y6D5 1785 aa18.31■□□□□ 0.52
ARPC1A-201ENST00000262942 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 NUP98P52948 1817 aa18.3■□□□□ 0.52
ARPC1A-201ENST00000262942 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms