RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
CDH20-201ENST00000262717 PHF8Q9UPP1 1060 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 ARHGEF28Q8N1W1 1705 aaKnown RBP17.85■□□□□ 0.45
CDH20-201ENST00000262717 SIGLEC1Q9BZZ2 1709 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 CHPF2Q9P2E5 772 aa17.85■□□□□ 0.45
CDH20-201ENST00000262717 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
CDH20-201ENST00000262717 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 FGD1P98174 961 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
CDH20-201ENST00000262717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.83■□□□□ 0.45
CDH20-201ENST00000262717 HOXC9P31274 260 aa17.83■□□□□ 0.45
CDH20-201ENST00000262717 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.45
CDH20-201ENST00000262717 ATP7BP35670 1465 aa17.83■□□□□ 0.45
CDH20-201ENST00000262717 CPS1P31327 1500 aa17.83■□□□□ 0.45
CDH20-201ENST00000262717 FLT4P35916 1363 aa17.83■□□□□ 0.44
CDH20-201ENST00000262717 KCNQ3O43525 872 aa17.83■□□□□ 0.44
CDH20-201ENST00000262717 PTMSP20962 102 aa17.82■□□□□ 0.44
CDH20-201ENST00000262717 DNTTIP2Q5QJE6 756 aaKnown RBP17.82■□□□□ 0.44
CDH20-201ENST00000262717 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
CDH20-201ENST00000262717 IL17REQ8NFR9 667 aa17.82■□□□□ 0.44
CDH20-201ENST00000262717 PIK3R4Q99570 1358 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 GAS2L3Q86XJ1 694 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 MYO5BQ9ULV0 1848 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 RIC3Q7Z5B4 369 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 KIF2CQ99661 725 aa17.81■□□□□ 0.44
CDH20-201ENST00000262717 SYCE3A1L190 88 aa17.8■□□□□ 0.44
CDH20-201ENST00000262717 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
CDH20-201ENST00000262717 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
CDH20-201ENST00000262717 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
CDH20-201ENST00000262717 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
CDH20-201ENST00000262717 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
CDH20-201ENST00000262717 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
CDH20-201ENST00000262717 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
CDH20-201ENST00000262717 FOSBP53539 338 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 CPA1P15085 419 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
CDH20-201ENST00000262717 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 ESPNB1AK53 854 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
CDH20-201ENST00000262717 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
CDH20-201ENST00000262717 FIBPO43427 364 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 UNC5CLQ8IV45 518 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 PALD1Q9ULE6 856 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 NEURL4Q96JN8 1562 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDH20-201ENST00000262717 GPATCH3Q96I76 525 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 CCDC8Q9H0W5 538 aaPredicted RBP17.77■□□□□ 0.44
CDH20-201ENST00000262717 PTCH1Q13635 1447 aa17.77■□□□□ 0.44
CDH20-201ENST00000262717 SETD1BQ9UPS6 1966 aaKnown RBP17.77■□□□□ 0.43
CDH20-201ENST00000262717 ATP8B2P98198 1209 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.43
CDH20-201ENST00000262717 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 CNTROBQ8N137 903 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 NBPF4Q96M43 638 aa17.77■□□□□ 0.43
CDH20-201ENST00000262717 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.43
CDH20-201ENST00000262717 AACSQ86V21 672 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 CPSF1Q10570 1443 aaKnown RBP17.76■□□□□ 0.43
CDH20-201ENST00000262717 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 RAPGEF4Q8WZA2 1011 aa17.76■□□□□ 0.43
CDH20-201ENST00000262717 PREX1Q8TCU6 1659 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
CDH20-201ENST00000262717 RHPN1Q8TCX5 695 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 USP6P35125 1406 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
CDH20-201ENST00000262717 CLTCQ00610 1675 aaKnown RBP17.74■□□□□ 0.43
CDH20-201ENST00000262717 TCEANC2Q96MN5 208 aa17.74■□□□□ 0.43
CDH20-201ENST00000262717 MAP2P11137 1827 aaKnown RBP17.74■□□□□ 0.43
CDH20-201ENST00000262717 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
CDH20-201ENST00000262717 CWC22Q9HCG8 908 aaKnown RBP17.74■□□□□ 0.43
CDH20-201ENST00000262717 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
CDH20-201ENST00000262717 GOLGA6L4A6NEF3 574 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 CHMLP26374 656 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 STK3Q13188 491 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 MED14O60244 1454 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
CDH20-201ENST00000262717 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
CDH20-201ENST00000262717 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 BOLA2Q9H3K6 86 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
CDH20-201ENST00000262717 JAKMIP1Q96N16 626 aaKnown RBP17.73■□□□□ 0.43
CDH20-201ENST00000262717 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
CDH20-201ENST00000262717 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
CDH20-201ENST00000262717 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
CDH20-201ENST00000262717 ZSCAN23Q3MJ62 389 aa17.72■□□□□ 0.43
CDH20-201ENST00000262717 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
CDH20-201ENST00000262717 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
CDH20-201ENST00000262717 DNAJC2Q99543 621 aaKnown RBP17.71■□□□□ 0.43
CDH20-201ENST00000262717 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms