RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 KRT32Q14532 448 aa20.33■□□□□ 0.85
KLF3-201ENST00000261438 ZFP91Q96JP5 570 aaPredicted RBP20.33■□□□□ 0.85
KLF3-201ENST00000261438 IPO4Q8TEX9 1081 aaKnown RBP20.33■□□□□ 0.84
KLF3-201ENST00000261438 ZNHIT6Q9NWK9 470 aaKnown RBP20.33■□□□□ 0.84
KLF3-201ENST00000261438 EPB41L2O43491 1005 aaKnown RBP20.33■□□□□ 0.84
KLF3-201ENST00000261438 TMC6Q7Z403 805 aa20.33■□□□□ 0.84
KLF3-201ENST00000261438 TOP1P11387 765 aaKnown RBP20.32■□□□□ 0.84
KLF3-201ENST00000261438 STX1AQ16623 288 aa20.32■□□□□ 0.84
KLF3-201ENST00000261438 SDSP20132 328 aa20.32■□□□□ 0.84
KLF3-201ENST00000261438 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
KLF3-201ENST00000261438 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
KLF3-201ENST00000261438 ZNF500O60304 480 aaPredicted RBP20.32■□□□□ 0.84
KLF3-201ENST00000261438 KIF4BQ2VIQ3 1234 aa20.32■□□□□ 0.84
KLF3-201ENST00000261438 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
KLF3-201ENST00000261438 AIMP1Q12904 312 aaKnown RBP20.32■□□□□ 0.84
KLF3-201ENST00000261438 DDX54Q8TDD1 881 aaKnown RBP20.31■□□□□ 0.84
KLF3-201ENST00000261438 TRIM34Q9BYJ4 488 aa20.31■□□□□ 0.84
KLF3-201ENST00000261438 GABPB1Q06547 395 aaPredicted RBP20.31■□□□□ 0.84
KLF3-201ENST00000261438 KIF5CO60282 957 aa20.31■□□□□ 0.84
KLF3-201ENST00000261438 PTGS1P23219 599 aa20.31■□□□□ 0.84
KLF3-201ENST00000261438 RIOK3O14730 519 aaKnown RBP20.31■□□□□ 0.84
KLF3-201ENST00000261438 CCDC181Q5TID7 509 aa20.31■□□□□ 0.84
KLF3-201ENST00000261438 ANO6Q4KMQ2 910 aa20.3■□□□□ 0.84
KLF3-201ENST00000261438 IQCEQ6IPM2 695 aa20.3■□□□□ 0.84
KLF3-201ENST00000261438 MAP9Q49MG5 647 aa20.3■□□□□ 0.84
KLF3-201ENST00000261438 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
KLF3-201ENST00000261438 RAB11FIP3O75154 756 aa20.3■□□□□ 0.84
KLF3-201ENST00000261438 PLCD4Q9BRC7 762 aa20.3■□□□□ 0.84
KLF3-201ENST00000261438 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
KLF3-201ENST00000261438 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
KLF3-201ENST00000261438 AACSQ86V21 672 aa20.29■□□□□ 0.84
KLF3-201ENST00000261438 MAGEC2Q9UBF1 373 aaPredicted RBP20.29■□□□□ 0.84
KLF3-201ENST00000261438 XBP1P17861 261 aa20.29■□□□□ 0.84
KLF3-201ENST00000261438 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
KLF3-201ENST00000261438 POTEB2H3BUK9 544 aa20.28■□□□□ 0.84
KLF3-201ENST00000261438 CCDC150Q8NCX0 1101 aa20.28■□□□□ 0.84
KLF3-201ENST00000261438 IVLP07476 585 aa20.28■□□□□ 0.84
KLF3-201ENST00000261438 ARFGAP3Q9NP61 516 aa20.28■□□□□ 0.84
KLF3-201ENST00000261438 LRRFIP2Q9Y608 721 aaKnown RBP20.28■□□□□ 0.84
KLF3-201ENST00000261438 VGLL3A8MV65 326 aa20.28■□□□□ 0.84
KLF3-201ENST00000261438 GLRX3O76003 335 aaKnown RBP20.28■□□□□ 0.84
KLF3-201ENST00000261438 TMX1Q9H3N1 280 aa20.28■□□□□ 0.84
KLF3-201ENST00000261438 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.84
KLF3-201ENST00000261438 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
KLF3-201ENST00000261438 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.84
KLF3-201ENST00000261438 KIF1BPQ96EK5 621 aa20.27■□□□□ 0.84
KLF3-201ENST00000261438 MNAT1P51948 309 aa20.27■□□□□ 0.83
KLF3-201ENST00000261438 C17orf53Q8N3J3 647 aaPredicted RBP20.26■□□□□ 0.83
KLF3-201ENST00000261438 DNAAF4Q8WXU2 420 aa20.26■□□□□ 0.83
KLF3-201ENST00000261438 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
KLF3-201ENST00000261438 GOLGA6L7A0A1B0GV03 622 aa20.26■□□□□ 0.83
KLF3-201ENST00000261438 TTC5Q8N0Z6 440 aa20.26■□□□□ 0.83
KLF3-201ENST00000261438 IBSPP21815 317 aaPredicted RBP20.26■□□□□ 0.83
KLF3-201ENST00000261438 RASSF4Q9H2L5 321 aa20.26■□□□□ 0.83
KLF3-201ENST00000261438 TSC1Q92574 1164 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
KLF3-201ENST00000261438 MYO6Q9UM54 1294 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 GOLGA6L9A6NEM1 432 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 DNAI1Q9UI46 699 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 MCM3P25205 808 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 FSIP1Q8NA03 581 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 GNG11P61952 73 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
KLF3-201ENST00000261438 ANAPC15P60006 121 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 C10orf67Q8IYJ2 551 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 IL16Q14005 1332 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 DHX37Q8IY37 1157 aaKnown RBP20.24■□□□□ 0.83
KLF3-201ENST00000261438 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 ODF2Q5BJF6 829 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 BCL2L12Q9HB09 334 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 LMBRD1Q9NUN5 540 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 RSPH14Q9UHP6 348 aa20.24■□□□□ 0.83
KLF3-201ENST00000261438 TYRO3Q06418 890 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 DMTNQ08495 405 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 SIL1Q9H173 461 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 F13A1P00488 732 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 ZSWIM4Q9H7M6 989 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 SPG7Q9UQ90 795 aa20.23■□□□□ 0.83
KLF3-201ENST00000261438 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
KLF3-201ENST00000261438 STK11IPQ8N1F8 1099 aa20.22■□□□□ 0.83
KLF3-201ENST00000261438 DNM1Q05193 864 aaKnown RBP20.22■□□□□ 0.83
KLF3-201ENST00000261438 DNAJC25Q9H1X3 360 aa20.22■□□□□ 0.83
KLF3-201ENST00000261438 CCAR1Q8IX12 1150 aaKnown RBP20.22■□□□□ 0.83
KLF3-201ENST00000261438 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
KLF3-201ENST00000261438 ZBTB40Q9NUA8 1239 aa20.21■□□□□ 0.83
KLF3-201ENST00000261438 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
KLF3-201ENST00000261438 SRRTQ9BXP5 876 aaKnown RBP20.21■□□□□ 0.83
KLF3-201ENST00000261438 TUBB4AP04350 444 aa20.21■□□□□ 0.83
KLF3-201ENST00000261438 BIN1O00499 593 aa20.21■□□□□ 0.83
KLF3-201ENST00000261438 INTS4Q96HW7 963 aaKnown RBP20.21■□□□□ 0.83
KLF3-201ENST00000261438 USP26Q9BXU7 913 aa20.21■□□□□ 0.83
KLF3-201ENST00000261438 CAPN2P17655 700 aa20.2■□□□□ 0.82
KLF3-201ENST00000261438 KIAA1328Q86T90 577 aa20.2■□□□□ 0.82
KLF3-201ENST00000261438 ESYT1Q9BSJ8 1104 aa20.2■□□□□ 0.82
KLF3-201ENST00000261438 SLC3A2P08195 630 aaKnown RBP20.2■□□□□ 0.82
KLF3-201ENST00000261438 CAMSAP2Q08AD1 1489 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms