RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 USHBP1Q8N6Y0 703 aa22.56■■□□□ 1.2
SSB-201ENST00000260956 MBIPQ9NS73 344 aa22.56■■□□□ 1.2
SSB-201ENST00000260956 FAM182BQ5T319 152 aa22.55■■□□□ 1.2
SSB-201ENST00000260956 NOB1Q9ULX3 412 aaKnown RBP22.55■■□□□ 1.2
SSB-201ENST00000260956 BRWD3Q6RI45 1802 aa22.55■■□□□ 1.2
SSB-201ENST00000260956 CFAP44Q96MT7 982 aa22.54■■□□□ 1.2
SSB-201ENST00000260956 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
SSB-201ENST00000260956 DISP2A7MBM2 1401 aa22.54■■□□□ 1.2
SSB-201ENST00000260956 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
SSB-201ENST00000260956 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
SSB-201ENST00000260956 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
SSB-201ENST00000260956 TSPYL6Q8N831 410 aa22.53■■□□□ 1.2
SSB-201ENST00000260956 IGSF1Q8N6C5 1336 aa22.52■■□□□ 1.2
SSB-201ENST00000260956 MRPL50Q8N5N7 158 aaKnown RBP22.51■■□□□ 1.19
SSB-201ENST00000260956 EYA1Q99502 592 aa22.51■■□□□ 1.19
SSB-201ENST00000260956 KRT27Q7Z3Y8 459 aa22.51■■□□□ 1.19
SSB-201ENST00000260956 FTSJ3Q8IY81 847 aaKnown RBP22.51■■□□□ 1.19
SSB-201ENST00000260956 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
SSB-201ENST00000260956 TMEM57Q8N5G2 664 aa22.5■■□□□ 1.19
SSB-201ENST00000260956 DDX19BQ9UMR2 479 aa22.49■■□□□ 1.19
SSB-201ENST00000260956 SOCS7O14512 581 aa22.48■■□□□ 1.19
SSB-201ENST00000260956 RGS3P49796 1198 aa22.48■■□□□ 1.19
SSB-201ENST00000260956 ARHGAP45Q92619 1136 aa22.48■■□□□ 1.19
SSB-201ENST00000260956 ZBTB40Q9NUA8 1239 aa22.48■■□□□ 1.19
SSB-201ENST00000260956 HDAC1Q13547 482 aaPredicted RBP22.48■■□□□ 1.19
SSB-201ENST00000260956 IPO8O15397 1037 aaKnown RBP22.47■■□□□ 1.19
SSB-201ENST00000260956 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
SSB-201ENST00000260956 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
SSB-201ENST00000260956 ABCC4O15439 1325 aa22.47■■□□□ 1.19
SSB-201ENST00000260956 MEGF6O75095 1541 aa22.46■■□□□ 1.19
SSB-201ENST00000260956 IL2RBP14784 551 aa22.46■■□□□ 1.19
SSB-201ENST00000260956 NCAPD2Q15021 1401 aa22.46■■□□□ 1.19
SSB-201ENST00000260956 CHL1O00533 1208 aa22.45■■□□□ 1.19
SSB-201ENST00000260956 RWDD1Q9H446 243 aaPredicted RBP22.45■■□□□ 1.19
SSB-201ENST00000260956 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.19
SSB-201ENST00000260956 PARP4Q9UKK3 1724 aaKnown RBP22.45■■□□□ 1.18
SSB-201ENST00000260956 DDB1Q16531 1140 aa22.45■■□□□ 1.18
SSB-201ENST00000260956 PDZRN3Q9UPQ7 1066 aa22.45■■□□□ 1.18
SSB-201ENST00000260956 WNK3Q9BYP7 1800 aa22.45■■□□□ 1.18
SSB-201ENST00000260956 MARCH10Q8NA82 808 aaPredicted RBP22.44■■□□□ 1.18
SSB-201ENST00000260956 TWISTNBQ3B726 338 aaPredicted RBP22.43■■□□□ 1.18
SSB-201ENST00000260956 ITPRIPQ8IWB1 547 aa22.43■■□□□ 1.18
SSB-201ENST00000260956 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
SSB-201ENST00000260956 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
SSB-201ENST00000260956 EXOC5O00471 708 aa22.41■■□□□ 1.18
SSB-201ENST00000260956 SMC5Q8IY18 1101 aa22.41■■□□□ 1.18
SSB-201ENST00000260956 NPM2Q86SE8 214 aaKnown RBP22.4■■□□□ 1.18
SSB-201ENST00000260956 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.18
SSB-201ENST00000260956 MTHFSDQ2M296 383 aaKnown RBP22.39■■□□□ 1.17
SSB-201ENST00000260956 TNS2Q63HR2 1409 aa22.39■■□□□ 1.17
SSB-201ENST00000260956 MCM10Q7L590 875 aa22.38■■□□□ 1.17
SSB-201ENST00000260956 ZBTB7BO15156 539 aaPredicted RBP22.37■■□□□ 1.17
SSB-201ENST00000260956 RAPGEF4Q8WZA2 1011 aa22.37■■□□□ 1.17
SSB-201ENST00000260956 ERICH6Q7L0X2 663 aa22.37■■□□□ 1.17
SSB-201ENST00000260956 PTF1AQ7RTS3 328 aa22.37■■□□□ 1.17
SSB-201ENST00000260956 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
SSB-201ENST00000260956 ZCRB1Q8TBF4 217 aaKnown RBP22.35■■□□□ 1.17
SSB-201ENST00000260956 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
SSB-201ENST00000260956 ELL2O00472 640 aaPredicted RBP22.34■■□□□ 1.17
SSB-201ENST00000260956 TATP17735 454 aaPredicted RBP22.34■■□□□ 1.17
SSB-201ENST00000260956 KRT24Q2M2I5 525 aa22.34■■□□□ 1.17
SSB-201ENST00000260956 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
SSB-201ENST00000260956 N4BP2Q86UW6 1770 aaPredicted RBP22.33■■□□□ 1.17
SSB-201ENST00000260956 SHANK3Q9BYB0 1731 aa22.32■■□□□ 1.16
SSB-201ENST00000260956 CYP27B1O15528 508 aa22.32■■□□□ 1.16
SSB-201ENST00000260956 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
SSB-201ENST00000260956 TRIM37O94972 964 aa22.32■■□□□ 1.16
SSB-201ENST00000260956 GAS2L2Q8NHY3 880 aa22.32■■□□□ 1.16
SSB-201ENST00000260956 API5Q9BZZ5 524 aaKnown RBP22.32■■□□□ 1.16
SSB-201ENST00000260956 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
SSB-201ENST00000260956 KCNQ2O43526 872 aa22.29■■□□□ 1.16
SSB-201ENST00000260956 SEC24BO95487 1268 aa22.29■■□□□ 1.16
SSB-201ENST00000260956 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
SSB-201ENST00000260956 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
SSB-201ENST00000260956 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
SSB-201ENST00000260956 BCL9O00512 1426 aa22.28■■□□□ 1.16
SSB-201ENST00000260956 SIRT2Q8IXJ6 389 aa22.28■■□□□ 1.16
SSB-201ENST00000260956 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
SSB-201ENST00000260956 NUCB1Q02818 461 aa22.27■■□□□ 1.16
SSB-201ENST00000260956 DEFB132Q7Z7B7 95 aa22.27■■□□□ 1.16
SSB-201ENST00000260956 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
SSB-201ENST00000260956 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
SSB-201ENST00000260956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.26■■□□□ 1.156e-8■■■■□ 21.2
SSB-201ENST00000260956 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
SSB-201ENST00000260956 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
SSB-201ENST00000260956 CACNA1FO60840 1977 aa22.25■■□□□ 1.15
SSB-201ENST00000260956 SRCAPQ6ZRS2 3230 aa22.24■■□□□ 1.15
SSB-201ENST00000260956 PTPRCP08575 1304 aa22.24■■□□□ 1.15
SSB-201ENST00000260956 PCDH11XQ9BZA7 1347 aa22.24■■□□□ 1.15
SSB-201ENST00000260956 PCDH11YQ9BZA8 1340 aa22.24■■□□□ 1.15
SSB-201ENST00000260956 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
SSB-201ENST00000260956 ADAMTS7Q9UKP4 1686 aa22.23■■□□□ 1.15
SSB-201ENST00000260956 CCDC125Q86Z20 511 aa22.23■■□□□ 1.15
SSB-201ENST00000260956 SBF2Q86WG5 1849 aa22.22■■□□□ 1.15
SSB-201ENST00000260956 GNAT3A8MTJ3 354 aa22.22■■□□□ 1.15
SSB-201ENST00000260956 PHKG2P15735 406 aa22.22■■□□□ 1.15
SSB-201ENST00000260956 IL17REQ8NFR9 667 aa22.22■■□□□ 1.15
SSB-201ENST00000260956 RTF1Q92541 710 aaKnown RBP22.22■■□□□ 1.15
SSB-201ENST00000260956 C1orf115Q9H7X2 142 aa22.21■■□□□ 1.15
SSB-201ENST00000260956 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms