RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 KCNQ4P56696 695 aa22.17■■□□□ 1.14
SDCBP-201ENST00000260130 R3HDM1Q15032 1099 aaKnown RBP22.16■■□□□ 1.14
SDCBP-201ENST00000260130 SCN11AQ9UI33 1791 aa22.16■■□□□ 1.14
SDCBP-201ENST00000260130 PSDA5PKW4 1024 aaPredicted RBP22.16■■□□□ 1.14
SDCBP-201ENST00000260130 RTF1Q92541 710 aaKnown RBP22.16■■□□□ 1.14
SDCBP-201ENST00000260130 HTATSF1O43719 755 aaKnown RBP22.15■■□□□ 1.14
SDCBP-201ENST00000260130 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
SDCBP-201ENST00000260130 ANO8Q9HCE9 1232 aaPredicted RBP22.15■■□□□ 1.14
SDCBP-201ENST00000260130 ADAMTS7Q9UKP4 1686 aa22.15■■□□□ 1.14
SDCBP-201ENST00000260130 LY75O60449 1722 aa22.15■■□□□ 1.14
SDCBP-201ENST00000260130 TEFQ10587 303 aa22.14■■□□□ 1.13
SDCBP-201ENST00000260130 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
SDCBP-201ENST00000260130 LOC102724428A0A0B4J2F2 783 aa22.14■■□□□ 1.13
SDCBP-201ENST00000260130 SIK1P57059 783 aa22.14■■□□□ 1.13
SDCBP-201ENST00000260130 CCDC146Q8IYE0 955 aa22.14■■□□□ 1.13
SDCBP-201ENST00000260130 STK32BQ9NY57 414 aa22.14■■□□□ 1.13
SDCBP-201ENST00000260130 RUNDC1Q96C34 613 aa22.13■■□□□ 1.13
SDCBP-201ENST00000260130 CEMIPQ8WUJ3 1361 aa22.13■■□□□ 1.13
SDCBP-201ENST00000260130 MRC1P22897 1456 aa22.13■■□□□ 1.13
SDCBP-201ENST00000260130 HMGB2P26583 209 aaKnown RBP22.12■■□□□ 1.13
SDCBP-201ENST00000260130 SLC15A2Q16348 729 aa22.12■■□□□ 1.13
SDCBP-201ENST00000260130 MCM10Q7L590 875 aa22.12■■□□□ 1.13
SDCBP-201ENST00000260130 DCTN1Q14203 1278 aa22.11■■□□□ 1.13
SDCBP-201ENST00000260130 RBM42Q9BTD8 480 aaKnown RBP22.11■■□□□ 1.13
SDCBP-201ENST00000260130 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
SDCBP-201ENST00000260130 PNISRQ8TF01 805 aaKnown RBP22.1■■□□□ 1.13
SDCBP-201ENST00000260130 PTCD1O75127 700 aaKnown RBP22.09■■□□□ 1.13
SDCBP-201ENST00000260130 TMPOP42166 694 aaKnown RBP22.09■■□□□ 1.13
SDCBP-201ENST00000260130 RIPK4P57078 832 aa22.09■■□□□ 1.13
SDCBP-201ENST00000260130 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
SDCBP-201ENST00000260130 AKT1S1Q96B36 256 aa22.09■■□□□ 1.13
SDCBP-201ENST00000260130 PAPPAQ13219 1627 aa22.09■■□□□ 1.13
SDCBP-201ENST00000260130 ZNF827Q17R98 1081 aa22.08■■□□□ 1.13
SDCBP-201ENST00000260130 SLC4A9Q96Q91 983 aa22.08■■□□□ 1.12
SDCBP-201ENST00000260130 ITPK1Q13572 414 aa22.06■■□□□ 1.12
SDCBP-201ENST00000260130 VIRMAQ69YN4 1812 aaKnown RBP22.06■■□□□ 1.12
SDCBP-201ENST00000260130 NEUROD2Q15784 382 aa22.05■■□□□ 1.12
SDCBP-201ENST00000260130 RRP7AQ9Y3A4 280 aaKnown RBP22.05■■□□□ 1.12
SDCBP-201ENST00000260130 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
SDCBP-201ENST00000260130 TTC5Q8N0Z6 440 aa22.05■■□□□ 1.12
SDCBP-201ENST00000260130 TFCP2L1Q9NZI6 479 aa22.05■■□□□ 1.12
SDCBP-201ENST00000260130 ZNF790Q6PG37 636 aa22.04■■□□□ 1.12
SDCBP-201ENST00000260130 LINC00116Q8NCU8 138 aa22.04■■□□□ 1.12
SDCBP-201ENST00000260130 LMOD3Q0VAK6 560 aa22.04■■□□□ 1.12
SDCBP-201ENST00000260130 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
SDCBP-201ENST00000260130 SRCAPQ6ZRS2 3230 aa22.02■■□□□ 1.12
SDCBP-201ENST00000260130 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
SDCBP-201ENST00000260130 APAF1O14727 1248 aa22.02■■□□□ 1.12
SDCBP-201ENST00000260130 C5P01031 1676 aa22.02■■□□□ 1.12
SDCBP-201ENST00000260130 DLG5Q8TDM6 1919 aa22.01■■□□□ 1.11
SDCBP-201ENST00000260130 PDGFDQ9GZP0 370 aaPredicted RBP22.01■■□□□ 1.11
SDCBP-201ENST00000260130 AK7Q96M32 723 aa22.01■■□□□ 1.11
SDCBP-201ENST00000260130 SIPA1L3O60292 1781 aaPredicted RBP22■■□□□ 1.11
SDCBP-201ENST00000260130 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
SDCBP-201ENST00000260130 KCPQ6ZWJ8 1503 aa22■■□□□ 1.11
SDCBP-201ENST00000260130 VSIG10Q8N0Z9 540 aa21.99■■□□□ 1.11
SDCBP-201ENST00000260130 ZNF496Q96IT1 587 aaPredicted RBP21.99■■□□□ 1.11
SDCBP-201ENST00000260130 TRIM35Q9UPQ4 493 aa21.99■■□□□ 1.11
SDCBP-201ENST00000260130 KCNQ3O43525 872 aa21.99■■□□□ 1.11
SDCBP-201ENST00000260130 TAF1LQ8IZX4 1826 aa21.99■■□□□ 1.11
SDCBP-201ENST00000260130 PNPLA7Q6ZV29 1317 aa21.99■■□□□ 1.11
SDCBP-201ENST00000260130 C4BP0C0L5 1744 aa21.98■■□□□ 1.11
SDCBP-201ENST00000260130 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
SDCBP-201ENST00000260130 FAM9BQ8IZU0 186 aa21.98■■□□□ 1.11
SDCBP-201ENST00000260130 FMNL2Q96PY5 1086 aa21.98■■□□□ 1.11
SDCBP-201ENST00000260130 MIS18AQ9NYP9 233 aa21.98■■□□□ 1.11
SDCBP-201ENST00000260130 DNAJC10Q8IXB1 793 aa21.97■■□□□ 1.11
SDCBP-201ENST00000260130 FLAD1Q8NFF5 587 aa21.96■■□□□ 1.11
SDCBP-201ENST00000260130 HEG1Q9ULI3 1381 aa21.95■■□□□ 1.11
SDCBP-201ENST00000260130 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.11
SDCBP-201ENST00000260130 CCER2I3L3R5 266 aa21.95■■□□□ 1.1
SDCBP-201ENST00000260130 GNPATO15228 680 aa21.95■■□□□ 1.1
SDCBP-201ENST00000260130 COL23A1Q86Y22 540 aaPredicted RBP21.95■■□□□ 1.1
SDCBP-201ENST00000260130 UBR2Q8IWV8 1755 aa21.94■■□□□ 1.1
SDCBP-201ENST00000260130 CRKLP46109 303 aaKnown RBP21.94■■□□□ 1.1
SDCBP-201ENST00000260130 AMIGO3Q86WK7 504 aa21.94■■□□□ 1.1
SDCBP-201ENST00000260130 ZBTB7AO95365 584 aa21.94■■□□□ 1.1
SDCBP-201ENST00000260130 CYP19A1P11511 503 aaPredicted RBP21.94■■□□□ 1.1
SDCBP-201ENST00000260130 TEX13AQ9BXU3 409 aaPredicted RBP21.94■■□□□ 1.1
SDCBP-201ENST00000260130 MSH5O43196 834 aa21.93■■□□□ 1.1
SDCBP-201ENST00000260130 SSFA2P28290 1259 aa21.93■■□□□ 1.1
SDCBP-201ENST00000260130 SLC16A10Q8TF71 515 aa21.93■■□□□ 1.1
SDCBP-201ENST00000260130 RTCBQ9Y3I0 505 aaKnown RBP21.93■■□□□ 1.1
SDCBP-201ENST00000260130 CASZ1Q86V15 1759 aa21.93■■□□□ 1.1
SDCBP-201ENST00000260130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
SDCBP-201ENST00000260130 PHF14O94880 888 aa21.92■■□□□ 1.1
SDCBP-201ENST00000260130 SMIM5Q71RC9 77 aa21.92■■□□□ 1.1
SDCBP-201ENST00000260130 SPON1Q9HCB6 807 aa21.92■■□□□ 1.1
SDCBP-201ENST00000260130 CICQ96RK0 1608 aaPredicted RBP21.92■■□□□ 1.1
SDCBP-201ENST00000260130 TJP1Q07157 1748 aa21.92■■□□□ 1.1
SDCBP-201ENST00000260130 BABAM1Q9NWV8 329 aa21.92■■□□□ 1.1
SDCBP-201ENST00000260130 QSER1Q2KHR3 1735 aa21.92■■□□□ 1.1
SDCBP-201ENST00000260130 RPS6KA4O75676 772 aa21.91■■□□□ 1.1
SDCBP-201ENST00000260130 STARD3NLO95772 234 aa21.91■■□□□ 1.1
SDCBP-201ENST00000260130 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
SDCBP-201ENST00000260130 MTFR1LQ9H019 292 aa21.91■■□□□ 1.1
SDCBP-201ENST00000260130 TSPYL4Q9UJ04 414 aa21.91■■□□□ 1.1
SDCBP-201ENST00000260130 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
SDCBP-201ENST00000260130 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
SDCBP-201ENST00000260130 CCDC87Q9NVE4 849 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms