RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 C16orf71Q8IYS4 520 aaPredicted RBP31.96■■■□□ 2.71
ACTR3B-201ENST00000256001 MED1Q15648 1581 aaPredicted RBP31.96■■■□□ 2.71
ACTR3B-201ENST00000256001 EIF4A1P60842 406 aaKnown RBP31.96■■■□□ 2.71
ACTR3B-201ENST00000256001 APBB1O00213 710 aa31.95■■■□□ 2.71
ACTR3B-201ENST00000256001 GNAI2P04899 355 aa31.95■■■□□ 2.71
ACTR3B-201ENST00000256001 NCAPD2Q15021 1401 aa31.95■■■□□ 2.71
ACTR3B-201ENST00000256001 MST1RQ04912 1400 aa31.95■■■□□ 2.7
ACTR3B-201ENST00000256001 ZC3H6P61129 1189 aaKnown RBP31.95■■■□□ 2.7
ACTR3B-201ENST00000256001 C1orf141Q5JVX7 400 aa31.95■■■□□ 2.7
ACTR3B-201ENST00000256001 LMO7Q8WWI1 1683 aa31.94■■■□□ 2.7
ACTR3B-201ENST00000256001 CACNA1FO60840 1977 aa31.94■■■□□ 2.7
ACTR3B-201ENST00000256001 EIF2S2P20042 333 aaKnown RBP31.94■■■□□ 2.7
ACTR3B-201ENST00000256001 TBC1D9Q6ZT07 1266 aa31.94■■■□□ 2.7
ACTR3B-201ENST00000256001 DDX17Q92841 729 aaKnown RBP31.94■■■□□ 2.7
ACTR3B-201ENST00000256001 BTBD11A6QL63 1104 aa31.93■■■□□ 2.7
ACTR3B-201ENST00000256001 SMARCA5O60264 1052 aaPredicted RBP31.92■■■□□ 2.7
ACTR3B-201ENST00000256001 GSPT1P15170 499 aaKnown RBP31.92■■■□□ 2.7
ACTR3B-201ENST00000256001 KCNQ3O43525 872 aa31.92■■■□□ 2.7
ACTR3B-201ENST00000256001 GNAI3P08754 354 aa31.92■■■□□ 2.7
ACTR3B-201ENST00000256001 SLKQ9H2G2 1235 aaPredicted RBP31.92■■■□□ 2.7
ACTR3B-201ENST00000256001 PHAXQ9H814 394 aaKnown RBP31.92■■■□□ 2.7
ACTR3B-201ENST00000256001 PXDNQ92626 1479 aa31.91■■■□□ 2.7
ACTR3B-201ENST00000256001 RNMTO43148 476 aaKnown RBP31.91■■■□□ 2.7
ACTR3B-201ENST00000256001 RBM25P49756 843 aaKnown RBP31.91■■■□□ 2.7
ACTR3B-201ENST00000256001 OTUD7AQ8TE49 926 aaPredicted RBP31.9■■■□□ 2.7
ACTR3B-201ENST00000256001 STRCP1A6NGW2 1772 aa31.9■■■□□ 2.7
ACTR3B-201ENST00000256001 ALS2Q96Q42 1657 aa31.89■■■□□ 2.7
ACTR3B-201ENST00000256001 TTC22Q5TAA0 569 aa31.89■■■□□ 2.7
ACTR3B-201ENST00000256001 KDM3BQ7LBC6 1761 aa31.88■■■□□ 2.69
ACTR3B-201ENST00000256001 CDC45O75419 566 aa31.88■■■□□ 2.69
ACTR3B-201ENST00000256001 HOXB7P09629 217 aa31.88■■■□□ 2.69
ACTR3B-201ENST00000256001 ERBB3P21860 1342 aa31.88■■■□□ 2.69
ACTR3B-201ENST00000256001 DCCP43146 1447 aa31.88■■■□□ 2.69
ACTR3B-201ENST00000256001 HSPA2P54652 639 aa31.86■■■□□ 2.69
ACTR3B-201ENST00000256001 RGPD5Q99666 1765 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 CHMP4AQ9BY43 222 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 CHPF2Q9P2E5 772 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 CAMTA1Q9Y6Y1 1673 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 PXDNLA1KZ92 1463 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 NCOA3Q9Y6Q9 1424 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 CADPS2Q86UW7 1296 aa31.85■■■□□ 2.69
ACTR3B-201ENST00000256001 USP44Q9H0E7 712 aa31.83■■■□□ 2.69
ACTR3B-201ENST00000256001 ANTXR1Q9H6X2 564 aa31.83■■■□□ 2.69
ACTR3B-201ENST00000256001 FRAT2O75474 233 aaPredicted RBP31.82■■■□□ 2.68
ACTR3B-201ENST00000256001 NPHP3Q7Z494 1330 aa31.82■■■□□ 2.68
ACTR3B-201ENST00000256001 ATP8B2P98198 1209 aa31.81■■■□□ 2.68
ACTR3B-201ENST00000256001 EXOC6BQ9Y2D4 811 aa31.81■■■□□ 2.68
ACTR3B-201ENST00000256001 LRRFIP2Q9Y608 721 aaKnown RBP31.81■■■□□ 2.68
ACTR3B-201ENST00000256001 PNMA6EA0A0J9YXQ4 647 aa31.81■■■□□ 2.68
ACTR3B-201ENST00000256001 NLRP2Q9NX02 1062 aa31.81■■■□□ 2.68
ACTR3B-201ENST00000256001 OVOS2A0A0G2JMS6 1433 aa31.81■■■□□ 2.68
ACTR3B-201ENST00000256001 SPRYD3Q8NCJ5 442 aa31.8■■■□□ 2.68
ACTR3B-201ENST00000256001 UBTFL1P0CB47 393 aaPredicted RBP31.8■■■□□ 2.68
ACTR3B-201ENST00000256001 CABLES1Q8TDN4 633 aa31.8■■■□□ 2.68
ACTR3B-201ENST00000256001 N4BP2Q86UW6 1770 aaPredicted RBP31.79■■■□□ 2.68
ACTR3B-201ENST00000256001 HSCBQ8IWL3 235 aa31.79■■■□□ 2.68
ACTR3B-201ENST00000256001 RAPGEF4Q8WZA2 1011 aa31.79■■■□□ 2.68
ACTR3B-201ENST00000256001 SRCIN1Q9C0H9 1055 aa31.79■■■□□ 2.68
ACTR3B-201ENST00000256001 ANXA1P04083 346 aa31.77■■■□□ 2.68
ACTR3B-201ENST00000256001 SDSP20132 328 aa31.76■■■□□ 2.68
ACTR3B-201ENST00000256001 PI4KAP2A4QPH2 592 aa31.75■■■□□ 2.67
ACTR3B-201ENST00000256001 PI4KAP1Q8N8J0 262 aa31.75■■■□□ 2.67
ACTR3B-201ENST00000256001 GIGYF1O75420 1035 aaPredicted RBP31.75■■■□□ 2.67
ACTR3B-201ENST00000256001 DNAAF4Q8WXU2 420 aa31.75■■■□□ 2.67
ACTR3B-201ENST00000256001 LRRCC1Q9C099 1032 aa31.75■■■□□ 2.67
ACTR3B-201ENST00000256001 TNS3Q68CZ2 1445 aa31.74■■■□□ 2.67
ACTR3B-201ENST00000256001 KIF2CQ99661 725 aa31.74■■■□□ 2.67
ACTR3B-201ENST00000256001 DBF4Q9UBU7 674 aaPredicted RBP31.74■■■□□ 2.67
ACTR3B-201ENST00000256001 EIF5BO60841 1220 aaKnown RBP31.73■■■□□ 2.67
ACTR3B-201ENST00000256001 CSB-PGBD3P0DP91 1061 aa31.73■■■□□ 2.67
ACTR3B-201ENST00000256001 PDE1AP54750 535 aa31.72■■■□□ 2.67
ACTR3B-201ENST00000256001 TATP17735 454 aaPredicted RBP31.72■■■□□ 2.67
ACTR3B-201ENST00000256001 CHRNA2Q15822 529 aa31.72■■■□□ 2.67
ACTR3B-201ENST00000256001 SNX21Q969T3 373 aa31.72■■■□□ 2.67
ACTR3B-201ENST00000256001 OSBPL3Q9H4L5 887 aa31.72■■■□□ 2.67
ACTR3B-201ENST00000256001 BEND3Q5T5X7 828 aa31.71■■■□□ 2.67
ACTR3B-201ENST00000256001 HEG1Q9ULI3 1381 aa31.71■■■□□ 2.67
ACTR3B-201ENST00000256001 IBTKQ9P2D0 1353 aaPredicted RBP31.7■■■□□ 2.67
ACTR3B-201ENST00000256001 SPATA31A3Q5VYP0 1347 aa31.7■■■□□ 2.66
ACTR3B-201ENST00000256001 CASC1Q6TDU7 716 aa31.69■■■□□ 2.66
ACTR3B-201ENST00000256001 PRAMEF22A3QJZ6 481 aa31.69■■■□□ 2.66
ACTR3B-201ENST00000256001 SPG7Q9UQ90 795 aa31.68■■■□□ 2.66
ACTR3B-201ENST00000256001 LMTK3Q96Q04 1460 aa31.68■■■□□ 2.66
ACTR3B-201ENST00000256001 ADCY9O60503 1353 aa31.68■■■□□ 2.66
ACTR3B-201ENST00000256001 COL18A1P39060 1754 aa31.67■■■□□ 2.66
ACTR3B-201ENST00000256001 NBPF7P0C2Y1 421 aaPredicted RBP31.67■■■□□ 2.66
ACTR3B-201ENST00000256001 SIPA1L3O60292 1781 aaPredicted RBP31.67■■■□□ 2.66
ACTR3B-201ENST00000256001 PROSER3Q2NL68 480 aa31.67■■■□□ 2.66
ACTR3B-201ENST00000256001 SSH3Q8TE77 659 aa31.67■■■□□ 2.66
ACTR3B-201ENST00000256001 ADAMTS7Q9UKP4 1686 aa31.66■■■□□ 2.66
ACTR3B-201ENST00000256001 PHKG2P15735 406 aa31.65■■■□□ 2.66
ACTR3B-201ENST00000256001 PPP1R42Q7Z4L9 355 aa31.65■■■□□ 2.66
ACTR3B-201ENST00000256001 MEGF6O75095 1541 aa31.65■■■□□ 2.66
ACTR3B-201ENST00000256001 SALL3Q9BXA9 1300 aa31.65■■■□□ 2.66
ACTR3B-201ENST00000256001 TSHZ3Q63HK5 1081 aa31.64■■■□□ 2.66
ACTR3B-201ENST00000256001 SLC52A2Q9HAB3 445 aa31.64■■■□□ 2.66
ACTR3B-201ENST00000256001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.64■■■□□ 2.66
ACTR3B-201ENST00000256001 MX1P20591 662 aa31.63■■■□□ 2.65
ACTR3B-201ENST00000256001 RBM42Q9BTD8 480 aaKnown RBP31.63■■■□□ 2.65
ACTR3B-201ENST00000256001 MAP3K2Q9Y2U5 619 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms